Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160875574
Identifier: 160875574
GI number: 160875574
Start: 2913018
End: 2913746
Strand: Reverse
Name: 160875574
Synonym: Sbal195_2462
Alternate gene names: NA
Gene position: 2913746-2913018 (Counterclockwise)
Preceding gene: 160875580
Following gene: 160875573
Centisome position: 54.49
GC content: 43.07
Gene sequence:
>729_bases ATGACCACAAATACTATCGTAACGTCGGATGATATTTTACTGAAGTTATGTCACTCAGTCGCCCACGTACTCTCTAGCAC CAGTGCCAGTAATGTTACCCACGCAGGTATGGTACAAAGTATCGCGCGCACGCGTCTAAAACCCGATCTTGGTTGTTTCT CGATTTTTGATGGTGGTTTTTCGGGCCTAGTCGTCATTAACTTTTCATCTTCGGCGGCGATTGAAATCTACCGTCGCTAC ATGCTGAACATGGGCATGCCTGAATCTGAGTTGGCATTTTCGCATACGTCAGATGAAGTGAGTAACGTGATGGGTGAGTT GATGAACCAAATCTTAGGGGATTTTATTAATAAAATTTCAAAAGAATTGCAAACGTCAATCAGCCAAAGTCAGCCAAAAA TGTTGACGATTAATAAAGAGTTAACCATTTCAATCGATGCTAACTTAGATGATGCGGTCGCCCGTAGAGTGTCGTTTAGA ACTGAAAACAATCATATTTTCTACCTCGAATTTGCCATGGATAAAACTGAGTTCATTCGTTTAGATGAATTTGTTTACGA TGAAGAATTCGACCCCGACAGCCTATTAGAGCAGCACAGTACGATAGGCGGTAATAAGGACTCAACGTCGAATGTTTCGC CTTGGGTGAAGATGGCAGACAAACCCGCCATTGCGACTCGCGCCATTGATAATGACGCCGATGATTTGCTCGATCAGCTT GGCATTTAA
Upstream 100 bases:
>100_bases CTTTACGGCCTTGCTAAATTAGGCTAATCAATTGTTTTAATTTTGATTTTTTACGCTTTTACGCGCAAGATTAATGCATT ATTCAGTTTGAGAATCGATT
Downstream 100 bases:
>100_bases GCAGAAAATCTAAGTGTAAGACGGATGTTAATGCATTCGTCTATACAAGTTAGCGGAACTGTTTTAGTATCGACGCAAAA TAATCACTAAGGTTACCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MTTNTIVTSDDILLKLCHSVAHVLSSTSASNVTHAGMVQSIARTRLKPDLGCFSIFDGGFSGLVVINFSSSAAIEIYRRY MLNMGMPESELAFSHTSDEVSNVMGELMNQILGDFINKISKELQTSISQSQPKMLTINKELTISIDANLDDAVARRVSFR TENNHIFYLEFAMDKTEFIRLDEFVYDEEFDPDSLLEQHSTIGGNKDSTSNVSPWVKMADKPAIATRAIDNDADDLLDQL GI
Sequences:
>Translated_242_residues MTTNTIVTSDDILLKLCHSVAHVLSSTSASNVTHAGMVQSIARTRLKPDLGCFSIFDGGFSGLVVINFSSSAAIEIYRRY MLNMGMPESELAFSHTSDEVSNVMGELMNQILGDFINKISKELQTSISQSQPKMLTINKELTISIDANLDDAVARRVSFR TENNHIFYLEFAMDKTEFIRLDEFVYDEEFDPDSLLEQHSTIGGNKDSTSNVSPWVKMADKPAIATRAIDNDADDLLDQL GI >Mature_241_residues TTNTIVTSDDILLKLCHSVAHVLSSTSASNVTHAGMVQSIARTRLKPDLGCFSIFDGGFSGLVVINFSSSAAIEIYRRYM LNMGMPESELAFSHTSDEVSNVMGELMNQILGDFINKISKELQTSISQSQPKMLTINKELTISIDANLDDAVARRVSFRT ENNHIFYLEFAMDKTEFIRLDEFVYDEEFDPDSLLEQHSTIGGNKDSTSNVSPWVKMADKPAIATRAIDNDADDLLDQLG I
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26828; Mature: 26696
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNTIVTSDDILLKLCHSVAHVLSSTSASNVTHAGMVQSIARTRLKPDLGCFSIFDGGF CCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCC SGLVVINFSSSAAIEIYRRYMLNMGMPESELAFSHTSDEVSNVMGELMNQILGDFINKIS CEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH KELQTSISQSQPKMLTINKELTISIDANLDDAVARRVSFRTENNHIFYLEFAMDKTEFIR HHHHHHHHHCCCCEEEECCEEEEEEECCCHHHHHHHHHEEECCCEEEEEEEECCCHHHHH LDEFVYDEEFDPDSLLEQHSTIGGNKDSTSNVSPWVKMADKPAIATRAIDNDADDLLDQL HHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCHHHHHCCCCHHHHHHHH GI CC >Mature Secondary Structure TTNTIVTSDDILLKLCHSVAHVLSSTSASNVTHAGMVQSIARTRLKPDLGCFSIFDGGF CCCCEEECHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCC SGLVVINFSSSAAIEIYRRYMLNMGMPESELAFSHTSDEVSNVMGELMNQILGDFINKIS CEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH KELQTSISQSQPKMLTINKELTISIDANLDDAVARRVSFRTENNHIFYLEFAMDKTEFIR HHHHHHHHHCCCCEEEECCEEEEEEECCCHHHHHHHHHEEECCCEEEEEEEECCCHHHHH LDEFVYDEEFDPDSLLEQHSTIGGNKDSTSNVSPWVKMADKPAIATRAIDNDADDLLDQL HHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCHHHHHCCCCHHHHHHHH GI CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA