| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875555
Identifier: 160875555
GI number: 160875555
Start: 2889768
End: 2890298
Strand: Reverse
Name: 160875555
Synonym: Sbal195_2443
Alternate gene names: NA
Gene position: 2890298-2889768 (Counterclockwise)
Preceding gene: 160875556
Following gene: 160875554
Centisome position: 54.05
GC content: 48.59
Gene sequence:
>531_bases ATGCGTTTATTGAGAACCACCCAAGATCCAGCGGTTAACCTACAGACGGCACGCGTTTTTTATCGCAGAGCTGCCCGCGC GATTGTGTTATCGGGTGAAGACATTTTGCTGCTTTATACCCAAAAATATCGCGATTACAGCTTACCCGGCGGCGGGATTG ACGACGGCGAGAGCCTCGAAGATGGACTGATCCGCGAGTTACAGGAAGAAACCGGCGCCCTAGACATTCAAGTGTTAGCG CCATTTGGTCGTTACGAAGAGTTTCGGCCTTGGTACCGTGAAGGGGCGAACGTAGTGCACATGGATTCATTCTGTTATGT GTGCCGTATCGACACCTCACTGGGCGAGCGTGGTTTAGGTGAGACTCGATTAGAAGCCCATGAGATAAAAAATGGCATGC GGCCTGAATGGCTTAATATTCATCAAGCTATCGCCCATAACGAAGATATTCAGCGTAATCACCCCCATAAAGGCCAATCA ATAGAGCGTGAAACTTTTCTGCTAAAACAGATAGTGTTGGAATGCTTGTAA
Upstream 100 bases:
>100_bases ACTGGACTGAGTGTGATTATTGCCTCTGCTACAGTTTTTGATCTGCATTTGGCACATTTTCGTTTATGCTGCGACTCCTT TTCGGCAAATGGCTACGACT
Downstream 100 bases:
>100_bases GTTTTATCACTTTTAAATCATTATCTTAATGTATGATTTTATTTCACACATAACTGAGTGAGCAGGGTTTGGTTAGCGAT TAAACGTCGTTATTTCAACC
Product: NUDIX hydrolase
Products: NA
Alternate protein names: MutT/Nudix Family Protein; MutT/NUDIX Family Protein; Nudix Hydrolase Protein; Phosphohydrolase; NTP Pyrophosphohydrolase; NUDIX Hydrolase Superfamily Protein; MutT/NUDIX Protein; Nudix Hydrolase
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MRLLRTTQDPAVNLQTARVFYRRAARAIVLSGEDILLLYTQKYRDYSLPGGGIDDGESLEDGLIRELQEETGALDIQVLA PFGRYEEFRPWYREGANVVHMDSFCYVCRIDTSLGERGLGETRLEAHEIKNGMRPEWLNIHQAIAHNEDIQRNHPHKGQS IERETFLLKQIVLECL
Sequences:
>Translated_176_residues MRLLRTTQDPAVNLQTARVFYRRAARAIVLSGEDILLLYTQKYRDYSLPGGGIDDGESLEDGLIRELQEETGALDIQVLA PFGRYEEFRPWYREGANVVHMDSFCYVCRIDTSLGERGLGETRLEAHEIKNGMRPEWLNIHQAIAHNEDIQRNHPHKGQS IERETFLLKQIVLECL >Mature_176_residues MRLLRTTQDPAVNLQTARVFYRRAARAIVLSGEDILLLYTQKYRDYSLPGGGIDDGESLEDGLIRELQEETGALDIQVLA PFGRYEEFRPWYREGANVVHMDSFCYVCRIDTSLGERGLGETRLEAHEIKNGMRPEWLNIHQAIAHNEDIQRNHPHKGQS IERETFLLKQIVLECL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20297; Mature: 20297
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLRTTQDPAVNLQTARVFYRRAARAIVLSGEDILLLYTQKYRDYSLPGGGIDDGESLE CCCCCCCCCCCCCHHHHHHHHHHHHHEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHH DGLIRELQEETGALDIQVLAPFGRYEEFRPWYREGANVVHMDSFCYVCRIDTSLGERGLG HHHHHHHHHHHCCEEEEEECCCCCCHHCCHHHHCCCCEEEECCEEEEEEECCCCCCCCCC ETRLEAHEIKNGMRPEWLNIHQAIAHNEDIQRNHPHKGQSIERETFLLKQIVLECL HHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHC >Mature Secondary Structure MRLLRTTQDPAVNLQTARVFYRRAARAIVLSGEDILLLYTQKYRDYSLPGGGIDDGESLE CCCCCCCCCCCCCHHHHHHHHHHHHHEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHH DGLIRELQEETGALDIQVLAPFGRYEEFRPWYREGANVVHMDSFCYVCRIDTSLGERGLG HHHHHHHHHHHCCEEEEEECCCCCCHHCCHHHHCCCCEEEECCEEEEEEECCCCCCCCCC ETRLEAHEIKNGMRPEWLNIHQAIAHNEDIQRNHPHKGQSIERETFLLKQIVLECL HHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA