| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is yfiP [C]
Identifier: 160875554
GI number: 160875554
Start: 2889016
End: 2889576
Strand: Reverse
Name: yfiP [C]
Synonym: Sbal195_2442
Alternate gene names: 160875554
Gene position: 2889576-2889016 (Counterclockwise)
Preceding gene: 160875555
Following gene: 160875552
Centisome position: 54.04
GC content: 49.02
Gene sequence:
>561_bases ATGAAGATTATTTTATTGACCCACGAACGCGAGTTAAGCCGCAAAACGAATACTGGCCAACTCGCGTTAGCCGCATTCCC TGAAGAGGTGAAAAGCATCGTCTGGTCGAGAACGGCACCTGATAACGATTTAGTGGCTATGTTGGCATCGCAGCAGGCTA AACTGTTGTTTCCAGCAATTGATACTGAGCACACTGGGCCCATTGATCAAAATGCCTTAGATACGGATTTAGCTGAGCCA GTGCTCTCGAATGCACAAATGTTGTTAGCGGCAGCGCAATCTACAGTGATAGCAGAACTAATGCCGAGCCAAGTGGTGAT TTTAGATGCGACCTGGCAGGAGGCGCGTAAGATGCTGCGCCAGAGCCCCTATCTTAAAACGGCTGCACGAGTCAGTTTGC CGCCACTTATGCCTGAATCCGCCTTTATATTGCGGCGTAATCAGCAAGAAGGAGGCTTGTGTACTGCAGAATGTATTATT GCACTTTGGCGCCAGTGTGGCAGAGCAGAACAAGCGGCGCTATTAGCGTCGCTGTTTACTGAATTGAATAGCCGTACTTG A
Upstream 100 bases:
>100_bases ATTTCAACCTGATCTTTTAAGCGGATTCACTTCGGTCTTCTGTATGATTAAGTTGATGAACAAGGCTATTTCTCATTCTT TTGCCGCAGCAAGGAAGGCA
Downstream 100 bases:
>100_bases TTGCGATGTTCGAGAGAACGTTTGAGGAAGTGCTTGAATAGATAATTAACGACTTTCAGCTTTGACTCACAGATAAATCA CCGTCAGTTAAATCACCATC
Product: DTW domain-containing protein
Products: NA
Alternate protein names: DTW Domain Containing Protein; DTW Protein
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MKIILLTHERELSRKTNTGQLALAAFPEEVKSIVWSRTAPDNDLVAMLASQQAKLLFPAIDTEHTGPIDQNALDTDLAEP VLSNAQMLLAAAQSTVIAELMPSQVVILDATWQEARKMLRQSPYLKTAARVSLPPLMPESAFILRRNQQEGGLCTAECII ALWRQCGRAEQAALLASLFTELNSRT
Sequences:
>Translated_186_residues MKIILLTHERELSRKTNTGQLALAAFPEEVKSIVWSRTAPDNDLVAMLASQQAKLLFPAIDTEHTGPIDQNALDTDLAEP VLSNAQMLLAAAQSTVIAELMPSQVVILDATWQEARKMLRQSPYLKTAARVSLPPLMPESAFILRRNQQEGGLCTAECII ALWRQCGRAEQAALLASLFTELNSRT >Mature_186_residues MKIILLTHERELSRKTNTGQLALAAFPEEVKSIVWSRTAPDNDLVAMLASQQAKLLFPAIDTEHTGPIDQNALDTDLAEP VLSNAQMLLAAAQSTVIAELMPSQVVILDATWQEARKMLRQSPYLKTAARVSLPPLMPESAFILRRNQQEGGLCTAECII ALWRQCGRAEQAALLASLFTELNSRT
Specific function: Unknown
COG id: COG3148
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082133, Length=189, Percent_Identity=32.8042328042328, Blast_Score=76, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20465; Mature: 20465
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIILLTHERELSRKTNTGQLALAAFPEEVKSIVWSRTAPDNDLVAMLASQQAKLLFPAI CEEEEEECCHHHHCCCCCCCEEEEECHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCC DTEHTGPIDQNALDTDLAEPVLSNAQMLLAAAQSTVIAELMPSQVVILDATWQEARKMLR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH QSPYLKTAARVSLPPLMPESAFILRRNQQEGGLCTAECIIALWRQCGRAEQAALLASLFT HCCCHHHHHHCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH ELNSRT HHHCCC >Mature Secondary Structure MKIILLTHERELSRKTNTGQLALAAFPEEVKSIVWSRTAPDNDLVAMLASQQAKLLFPAI CEEEEEECCHHHHCCCCCCCEEEEECHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCC DTEHTGPIDQNALDTDLAEPVLSNAQMLLAAAQSTVIAELMPSQVVILDATWQEARKMLR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH QSPYLKTAARVSLPPLMPESAFILRRNQQEGGLCTAECIIALWRQCGRAEQAALLASLFT HCCCHHHHHHCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH ELNSRT HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA