Click here to switch to the map view.

The map label for this gene is ycjF [C]

Identifier: 160874761

GI number: 160874761

Start: 1984991

End: 1986211

Strand: Direct

Name: ycjF [C]

Synonym: Sbal195_1644

Alternate gene names: 160874761

Gene position: 1984991-1986211 (Clockwise)

Preceding gene: 160874760

Following gene: 160874762

Centisome position: 37.12

GC content: 49.06

Gene sequence:

>1221_bases
ATGACGCTAAAGCTATCGGATAACGCTAATGAGCAGGCTTCTAATTCTTCTGCGAACTCATTTGCACACTCAGTTGAACA
TAAGCCGCTGAAAAAGCAGCAGCTGTTTGACTCACAAGTTGTTGAGCTCAAACCCAGCAAAGAGGAGCTCAAAGGGGCGA
AAGTCTTTGCTCCGCATACGCCAGTACAAGAAGTGGCTGCCGATATTGAGGAATTGATGGATGAAACGCTGTCATCCCAT
CCTAAAATGATCGATGCTAAATCGGTATCGCCTCAACTCGTTAAATCACGCCGTTGGTCTTGGCTCGCTCGTCTGGCGGC
AACGAGTTTATTGCTGCTCGTGGTGGTACAAACGGCATTGGGACTGAGGGATGCTTGGCTTGAGAGCCCTTGGTTGTTCA
GTTTTTATGGCGTGGTGCTTGGGGTTGTCAGTGCGTGGGCATTGGCGGGGGCAGTCAGTGAGTACCGCAAACTGAAGCGA
CTCAAACAGGTTGCCGATACCCAAGAAACAGGCGCTAGGCTGGCGCAGAGCATGCAAATGGGTGAGGCAGACAGCTTTAT
CGATAACATAGTGTGCCACTATGGCGACAGCCAAGGTTTGCAGCAACTGCGTCGCTCATTAAAAGATGAACATAATGATG
CCGAGAAAGTCTTGTTATTCGAGGACTTAGTGCTGACGGAGCGAGATGAACTGGCCAAAAAAGTAGTGCGACGCTATGCG
GCTGAGTCGGCAGTGCTACTGGCGGCCAGTCCGTTAGCTGTGCTCGATATGGCAATCATCCTTTGGCGTAATCAACGTAT
GCTGCGTGATGTCGCCCGCTGTTATGGCATAGAGCTAGGTTATTGGAGCCGGATTAAACTTATCCGCAGTATCATCATCA
ATATTATTTATGCGGGCACCAGTGAGTTAGTTACCGATTTAGGAACACAGCTGTTATCGGTTGAAATGACAGGTAAATTG
TCTGCTCGTTTGGCGCAAGGTTTAGGGGGCGGCATGCTAACTGCGCGCCTTGGATATCAAGCCATGGCGCTGTGTCGGCC
GATTGTGTTTAGGGAAGAGCAAAGGCCTAAATTGTCTAAAGTGCATCAGGAATTGTTGATCGAACTGAAGCAGTTTTCAG
GCAAGTTGTTTACCAAGGAAGGCCGCGACGCATTAAAAGGCCAGTTCGCCGATGTTGATGACAAAGTACCTCAGTCAGCT
AAAGATAAATCTAAAGAGTAG

Upstream 100 bases:

>100_bases
TTGCACCGCCGAGCAATGTCAATGTTGACCCATCTCAAGTGCACTTTGACCATATTCGTCTCGATCATTTGTTGCAGTAC
TTACTGGGAGATAAGTTGGA

Downstream 100 bases:

>100_bases
ATATTATTTAATATTAAACAATTAACCGATTTAAATCGGCCGAAAGTAGATGCGCTAATGGACTTGTTCCTTAGCGCATT
TTTTTATGATTTTTTGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MTLKLSDNANEQASNSSANSFAHSVEHKPLKKQQLFDSQVVELKPSKEELKGAKVFAPHTPVQEVAADIEELMDETLSSH
PKMIDAKSVSPQLVKSRRWSWLARLAATSLLLLVVVQTALGLRDAWLESPWLFSFYGVVLGVVSAWALAGAVSEYRKLKR
LKQVADTQETGARLAQSMQMGEADSFIDNIVCHYGDSQGLQQLRRSLKDEHNDAEKVLLFEDLVLTERDELAKKVVRRYA
AESAVLLAASPLAVLDMAIILWRNQRMLRDVARCYGIELGYWSRIKLIRSIIINIIYAGTSELVTDLGTQLLSVEMTGKL
SARLAQGLGGGMLTARLGYQAMALCRPIVFREEQRPKLSKVHQELLIELKQFSGKLFTKEGRDALKGQFADVDDKVPQSA
KDKSKE

Sequences:

>Translated_406_residues
MTLKLSDNANEQASNSSANSFAHSVEHKPLKKQQLFDSQVVELKPSKEELKGAKVFAPHTPVQEVAADIEELMDETLSSH
PKMIDAKSVSPQLVKSRRWSWLARLAATSLLLLVVVQTALGLRDAWLESPWLFSFYGVVLGVVSAWALAGAVSEYRKLKR
LKQVADTQETGARLAQSMQMGEADSFIDNIVCHYGDSQGLQQLRRSLKDEHNDAEKVLLFEDLVLTERDELAKKVVRRYA
AESAVLLAASPLAVLDMAIILWRNQRMLRDVARCYGIELGYWSRIKLIRSIIINIIYAGTSELVTDLGTQLLSVEMTGKL
SARLAQGLGGGMLTARLGYQAMALCRPIVFREEQRPKLSKVHQELLIELKQFSGKLFTKEGRDALKGQFADVDDKVPQSA
KDKSKE
>Mature_405_residues
TLKLSDNANEQASNSSANSFAHSVEHKPLKKQQLFDSQVVELKPSKEELKGAKVFAPHTPVQEVAADIEELMDETLSSHP
KMIDAKSVSPQLVKSRRWSWLARLAATSLLLLVVVQTALGLRDAWLESPWLFSFYGVVLGVVSAWALAGAVSEYRKLKRL
KQVADTQETGARLAQSMQMGEADSFIDNIVCHYGDSQGLQQLRRSLKDEHNDAEKVLLFEDLVLTERDELAKKVVRRYAA
ESAVLLAASPLAVLDMAIILWRNQRMLRDVARCYGIELGYWSRIKLIRSIIINIIYAGTSELVTDLGTQLLSVEMTGKLS
ARLAQGLGGGMLTARLGYQAMALCRPIVFREEQRPKLSKVHQELLIELKQFSGKLFTKEGRDALKGQFADVDDKVPQSAK
DKSKE

Specific function: Unknown

COG id: COG3768

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0283 family [H]

Homologues:

Organism=Escherichia coli, GI1787582, Length=354, Percent_Identity=34.7457627118644, Blast_Score=168, Evalue=7e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021147
- InterPro:   IPR006507 [H]

Pfam domain/function: PF05128 DUF697 [H]

EC number: NA

Molecular weight: Translated: 45263; Mature: 45132

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKLSDNANEQASNSSANSFAHSVEHKPLKKQQLFDSQVVELKPSKEELKGAKVFAPHT
CEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHCCCEEECCCC
PVQEVAADIEELMDETLSSHPKMIDAKSVSPQLVKSRRWSWLARLAATSLLLLVVVQTAL
CHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLRDAWLESPWLFSFYGVVLGVVSAWALAGAVSEYRKLKRLKQVADTQETGARLAQSMQM
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GEADSFIDNIVCHYGDSQGLQQLRRSLKDEHNDAEKVLLFEDLVLTERDELAKKVVRRYA
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AESAVLLAASPLAVLDMAIILWRNQRMLRDVARCYGIELGYWSRIKLIRSIIINIIYAGT
HHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCH
SELVTDLGTQLLSVEMTGKLSARLAQGLGGGMLTARLGYQAMALCRPIVFREEQRPKLSK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
VHQELLIELKQFSGKLFTKEGRDALKGQFADVDDKVPQSAKDKSKE
HHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TLKLSDNANEQASNSSANSFAHSVEHKPLKKQQLFDSQVVELKPSKEELKGAKVFAPHT
EEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHCCCEEECCCC
PVQEVAADIEELMDETLSSHPKMIDAKSVSPQLVKSRRWSWLARLAATSLLLLVVVQTAL
CHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLRDAWLESPWLFSFYGVVLGVVSAWALAGAVSEYRKLKRLKQVADTQETGARLAQSMQM
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GEADSFIDNIVCHYGDSQGLQQLRRSLKDEHNDAEKVLLFEDLVLTERDELAKKVVRRYA
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AESAVLLAASPLAVLDMAIILWRNQRMLRDVARCYGIELGYWSRIKLIRSIIINIIYAGT
HHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCH
SELVTDLGTQLLSVEMTGKLSARLAQGLGGGMLTARLGYQAMALCRPIVFREEQRPKLSK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
VHQELLIELKQFSGKLFTKEGRDALKGQFADVDDKVPQSAKDKSKE
HHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]