| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is lon [H]
Identifier: 160874746
GI number: 160874746
Start: 1968625
End: 1970982
Strand: Direct
Name: lon [H]
Synonym: Sbal195_1629
Alternate gene names: 160874746
Gene position: 1968625-1970982 (Clockwise)
Preceding gene: 160874745
Following gene: 160874747
Centisome position: 36.82
GC content: 47.07
Gene sequence:
>2358_bases ATGACCCAAGAGCGTGAAGCGCATATCGAACTCCCCGTGCTGCCACTGCGAGATGTGGTGGTCTATCCCCATATGGTAAT TCCGTTATTTGTCGGACGAGAAAAATCTATTCGATGTCTCGAAACCGCAATGGCGCAGGATAAGCAAATTATTTTAGTGG CGCAGCGTGATGCCGAACTCGATGAACCATCAAAAGATGACATCTTCGAAGTGGGTACGGTTGCCTCTATTTTACAGTTA CTTAAGCTGCCAGACGGCACAGTCAAAGTGTTGGTAGAAGGCGGTCGTCGCGCCCGTATTACCCGTTACACCCAAGAAAC AGAATTCTTTGTGGCTAAGGCTGAGTATCTGGAATCAGAACCGCTGGAAGACAAAGAAGAAGAAGTGTTAGTGCGCAGTG CTATTGGTCAGTTTGAAGGTTATATCAAGCTGAACAAAAAGATCCCGCCAGAAGTCTTGACCTCTTTATCGGGTATCGAT GAAGCGGCGCGTCTGGCAGATACTATGGCCGCACACATGCCACTTAAGCTTGAAGATAAGCAATCTGTGCTTGAGATGAT CAACGTTGGCGAGCGTCTCGAATATTTAATGGCGATGATGGAATCGGAGATCGACCTATTGCAGGTTGAGAAACGTATCC GTACCCGCGTTAAAAAACAGATGGAAAAAAGTCAGCGTGAGTACTATCTGAACGAACAGATGAAAGCCATCCAGAAAGAA CTGGGTGACTTAGACGAAGGCCATGACGAGTTTGAAGCCTTAAATCGTAAGATTGAAGAGGCTAACATGCCCGCCGAGGC GAAAGAAAAAGCCCTGGCTGAGCTTAACAAGCTACGTATGATGTCGCCAATGTCGGCAGAAGCCACAGTTGTTCGCAGCT ATGTGGATTGGATGACGTCAGTGCCTTGGAGCCAACGCTCTAAAATCAAACGTGATTTAGCGAAAGCCCAAGAAGTGCTC GATACCGATCATTTTGGTCTGGAAAAAGTTAAAGAACGTATCTTGGAATATTTGGCAGTCCAAAGCCGAGTGCGTCAGCT TAAAGGGCCAATCCTGTGTCTCGTTGGACCTCCAGGTGTGGGTAAAACTTCCTTGGGTCAATCGATCGCTAAGGCGACCG GTCGTAAGTATGTGCGTGTTGCTTTAGGCGGCGTGCGTGATGAAGCGGAAATCCGTGGTCATCGCCGTACTTATATTGGT TCTATGCCAGGTAAAGTCATTCAAAAAATGGCTAAAGTGGGCGTGAAAAACCCATTATTCTTGCTCGATGAAATCGACAA GATGAGTTCAGACATGCGCGGCGATCCGGCTTCTGCTTTATTAGAAGTGTTAGATCCTGAGCAAAATGCGACCTTTAACG ATCATTACCTCGAAGTCGATTACGACTTATCCGATGTGATGTTTGTGGCAACGTCTAACTCTATGGACATTCCTGGGCCA CTACTTGACCGTATGGAAGTGATCCGTTTGTCGGGTTACACCGAAGACGAGAAGCTGAATATTGCTAAGCAACATTTGCT GAATAAGCAAATTGAGCGCAACGGCTTAAAAGCGGCTGAAATTAAAGTCGAGGATAGCGCTATCGTTGGCATTATCCGCT ATTACACCCGTGAAGCGGGCGTGCGTTCACTTGAGCGTGAATTGTCTAAGATTTGCCGTAAAGTCGTGAAAATGATTTTG CTCGATAAATCAGTAAAATCTGTCACTGTGAATCAAGATAATCTTAAGTCATTCCTTGGCGTGCAGCGCTTCGATTACGG TAAAGCCGAGTCGAAGAACCAAATCGGTCAAGTGACAGGCTTAGCGTGGACACAAGTCGGCGGTGATCTGCTAACGATTG AAGCAACATCGGTACCAGGTAAAGGTAAATTAACTTATACCGGTTCCCTTGGCGACGTGATGCAAGAGTCGATTCAAGCG GCGATGACAGTTGTTCGTGCCCGTGCGGAACAATTAGGTATTAATGCGGATTTCTACGAGAAGCGTGATATCCATGTGCA TGTGCCAGAAGGTGCAACGCCAAAAGATGGGCCATCGGCCGGTGCGGCTATGTGTACCGCTTTAGTATCCAGCTTAACGG GTAACCCTGTGCGTAGCGACGTGGCCATGACAGGTGAAATAACCTTACGTGGTGAAGTGTTACCTATCGGTGGTTTGAAA GAAAAACTGCTGGCAGCACACCGCGGCGGCATAAAATTAGTGCTTATACCAAAAGAAAACGAGCGTGATCTGGAAGAAAT TCCTGCCAATGTGATTGCCGATTTAGAAATTCGTCCCGTGCGTTGGGTCGATGAAGTGTTAAAACTGGCCCTAGAAAGAC CGGTTGAAGGCTTCGAAGTGGTTAAAAACTTGGCATAA
Upstream 100 bases:
>100_bases GAGTCCAATGGACTCCTTTTTTCGTATTAGCCATTGAAACTCAATAAAGCGTCCCAATATACTCCAGTATTAATCCATTT CACCAAAACGGAATCGAACT
Downstream 100 bases:
>100_bases CGCAAGAAATTGCGCTATCACGTTAAAAAAAATGAAAAAAGGGGCTTAACAAAGCGTAGACCTGTGGTAGCCTAGGTCTG TGGAGAGCCAACTGCTCCAA
Product: ATP-dependent protease La
Products: NA
Alternate protein names: ATP-dependent protease La [H]
Number of amino acids: Translated: 785; Mature: 784
Protein sequence:
>785_residues MTQEREAHIELPVLPLRDVVVYPHMVIPLFVGREKSIRCLETAMAQDKQIILVAQRDAELDEPSKDDIFEVGTVASILQL LKLPDGTVKVLVEGGRRARITRYTQETEFFVAKAEYLESEPLEDKEEEVLVRSAIGQFEGYIKLNKKIPPEVLTSLSGID EAARLADTMAAHMPLKLEDKQSVLEMINVGERLEYLMAMMESEIDLLQVEKRIRTRVKKQMEKSQREYYLNEQMKAIQKE LGDLDEGHDEFEALNRKIEEANMPAEAKEKALAELNKLRMMSPMSAEATVVRSYVDWMTSVPWSQRSKIKRDLAKAQEVL DTDHFGLEKVKERILEYLAVQSRVRQLKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRVALGGVRDEAEIRGHRRTYIG SMPGKVIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNATFNDHYLEVDYDLSDVMFVATSNSMDIPGP LLDRMEVIRLSGYTEDEKLNIAKQHLLNKQIERNGLKAAEIKVEDSAIVGIIRYYTREAGVRSLERELSKICRKVVKMIL LDKSVKSVTVNQDNLKSFLGVQRFDYGKAESKNQIGQVTGLAWTQVGGDLLTIEATSVPGKGKLTYTGSLGDVMQESIQA AMTVVRARAEQLGINADFYEKRDIHVHVPEGATPKDGPSAGAAMCTALVSSLTGNPVRSDVAMTGEITLRGEVLPIGGLK EKLLAAHRGGIKLVLIPKENERDLEEIPANVIADLEIRPVRWVDEVLKLALERPVEGFEVVKNLA
Sequences:
>Translated_785_residues MTQEREAHIELPVLPLRDVVVYPHMVIPLFVGREKSIRCLETAMAQDKQIILVAQRDAELDEPSKDDIFEVGTVASILQL LKLPDGTVKVLVEGGRRARITRYTQETEFFVAKAEYLESEPLEDKEEEVLVRSAIGQFEGYIKLNKKIPPEVLTSLSGID EAARLADTMAAHMPLKLEDKQSVLEMINVGERLEYLMAMMESEIDLLQVEKRIRTRVKKQMEKSQREYYLNEQMKAIQKE LGDLDEGHDEFEALNRKIEEANMPAEAKEKALAELNKLRMMSPMSAEATVVRSYVDWMTSVPWSQRSKIKRDLAKAQEVL DTDHFGLEKVKERILEYLAVQSRVRQLKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRVALGGVRDEAEIRGHRRTYIG SMPGKVIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNATFNDHYLEVDYDLSDVMFVATSNSMDIPGP LLDRMEVIRLSGYTEDEKLNIAKQHLLNKQIERNGLKAAEIKVEDSAIVGIIRYYTREAGVRSLERELSKICRKVVKMIL LDKSVKSVTVNQDNLKSFLGVQRFDYGKAESKNQIGQVTGLAWTQVGGDLLTIEATSVPGKGKLTYTGSLGDVMQESIQA AMTVVRARAEQLGINADFYEKRDIHVHVPEGATPKDGPSAGAAMCTALVSSLTGNPVRSDVAMTGEITLRGEVLPIGGLK EKLLAAHRGGIKLVLIPKENERDLEEIPANVIADLEIRPVRWVDEVLKLALERPVEGFEVVKNLA >Mature_784_residues TQEREAHIELPVLPLRDVVVYPHMVIPLFVGREKSIRCLETAMAQDKQIILVAQRDAELDEPSKDDIFEVGTVASILQLL KLPDGTVKVLVEGGRRARITRYTQETEFFVAKAEYLESEPLEDKEEEVLVRSAIGQFEGYIKLNKKIPPEVLTSLSGIDE AARLADTMAAHMPLKLEDKQSVLEMINVGERLEYLMAMMESEIDLLQVEKRIRTRVKKQMEKSQREYYLNEQMKAIQKEL GDLDEGHDEFEALNRKIEEANMPAEAKEKALAELNKLRMMSPMSAEATVVRSYVDWMTSVPWSQRSKIKRDLAKAQEVLD TDHFGLEKVKERILEYLAVQSRVRQLKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRVALGGVRDEAEIRGHRRTYIGS MPGKVIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNATFNDHYLEVDYDLSDVMFVATSNSMDIPGPL LDRMEVIRLSGYTEDEKLNIAKQHLLNKQIERNGLKAAEIKVEDSAIVGIIRYYTREAGVRSLERELSKICRKVVKMILL DKSVKSVTVNQDNLKSFLGVQRFDYGKAESKNQIGQVTGLAWTQVGGDLLTIEATSVPGKGKLTYTGSLGDVMQESIQAA MTVVRARAEQLGINADFYEKRDIHVHVPEGATPKDGPSAGAAMCTALVSSLTGNPVRSDVAMTGEITLRGEVLPIGGLKE KLLAAHRGGIKLVLIPKENERDLEEIPANVIADLEIRPVRWVDEVLKLALERPVEGFEVVKNLA
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain [H]
Homologues:
Organism=Homo sapiens, GI31377667, Length=775, Percent_Identity=39.0967741935484, Blast_Score=528, Evalue=1e-150, Organism=Homo sapiens, GI21396489, Length=830, Percent_Identity=36.3855421686747, Blast_Score=506, Evalue=1e-143, Organism=Escherichia coli, GI1786643, Length=781, Percent_Identity=80.921895006402, Blast_Score=1288, Evalue=0.0, Organism=Caenorhabditis elegans, GI17505831, Length=653, Percent_Identity=41.3476263399694, Blast_Score=499, Evalue=1e-141, Organism=Caenorhabditis elegans, GI17556486, Length=797, Percent_Identity=34.3789209535759, Blast_Score=437, Evalue=1e-122, Organism=Saccharomyces cerevisiae, GI6319449, Length=723, Percent_Identity=38.3125864453665, Blast_Score=493, Evalue=1e-140, Organism=Drosophila melanogaster, GI221513036, Length=629, Percent_Identity=44.3561208267091, Blast_Score=523, Evalue=1e-148, Organism=Drosophila melanogaster, GI24666867, Length=620, Percent_Identity=44.6774193548387, Blast_Score=523, Evalue=1e-148,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 [H]
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C [H]
EC number: =3.4.21.53 [H]
Molecular weight: Translated: 87646; Mature: 87514
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: PS01046 LON_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQEREAHIELPVLPLRDVVVYPHMVIPLFVGREKSIRCLETAMAQDKQIILVAQRDAEL CCCCCCCCEECCCCCHHHHHHCCHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEECCCCC DEPSKDDIFEVGTVASILQLLKLPDGTVKVLVEGGRRARITRYTQETEFFVAKAEYLESE CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEEHHHHHHHHHHHHHHHCCC PLEDKEEEVLVRSAIGQFEGYIKLNKKIPPEVLTSLSGIDEAARLADTMAAHMPLKLEDK CCCCHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCEECHH QSVLEMINVGERLEYLMAMMESEIDLLQVEKRIRTRVKKQMEKSQREYYLNEQMKAIQKE HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGDLDEGHDEFEALNRKIEEANMPAEAKEKALAELNKLRMMSPMSAEATVVRSYVDWMTS HCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC VPWSQRSKIKRDLAKAQEVLDTDHFGLEKVKERILEYLAVQSRVRQLKGPILCLVGPPGV CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC GKTSLGQSIAKATGRKYVRVALGGVRDEAEIRGHRRTYIGSMPGKVIQKMAKVGVKNPLF CHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCCHHHHCCCCCHHHHHHHHHCCCCCCHH LLDEIDKMSSDMRGDPASALLEVLDPEQNATFNDHYLEVDYDLSDVMFVATSNSMDIPGP HHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCH LLDRMEVIRLSGYTEDEKLNIAKQHLLNKQIERNGLKAAEIKVEDSAIVGIIRYYTREAG HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHH VRSLERELSKICRKVVKMILLDKSVKSVTVNQDNLKSFLGVQRFDYGKAESKNQIGQVTG HHHHHHHHHHHHHHHHHHHHHCCCHHEEECCHHHHHHHHHHHHCCCCCCCCCHHHHHHHC LAWTQVGGDLLTIEATSVPGKGKLTYTGSLGDVMQESIQAAMTVVRARAEQLGINADFYE CHHHHCCCCEEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC KRDIHVHVPEGATPKDGPSAGAAMCTALVSSLTGNPVRSDVAMTGEITLRGEVLPIGGLK CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECEEEECCCHH EKLLAAHRGGIKLVLIPKENERDLEEIPANVIADLEIRPVRWVDEVLKLALERPVEGFEV HHHHHHHCCCEEEEEECCCCCCCHHHCCHHHEECCCCCCHHHHHHHHHHHHHCCCHHHHH VKNLA HHHCC >Mature Secondary Structure TQEREAHIELPVLPLRDVVVYPHMVIPLFVGREKSIRCLETAMAQDKQIILVAQRDAEL CCCCCCCEECCCCCHHHHHHCCHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEECCCCC DEPSKDDIFEVGTVASILQLLKLPDGTVKVLVEGGRRARITRYTQETEFFVAKAEYLESE CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEEHHHHHHHHHHHHHHHCCC PLEDKEEEVLVRSAIGQFEGYIKLNKKIPPEVLTSLSGIDEAARLADTMAAHMPLKLEDK CCCCHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCEECHH QSVLEMINVGERLEYLMAMMESEIDLLQVEKRIRTRVKKQMEKSQREYYLNEQMKAIQKE HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGDLDEGHDEFEALNRKIEEANMPAEAKEKALAELNKLRMMSPMSAEATVVRSYVDWMTS HCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC VPWSQRSKIKRDLAKAQEVLDTDHFGLEKVKERILEYLAVQSRVRQLKGPILCLVGPPGV CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC GKTSLGQSIAKATGRKYVRVALGGVRDEAEIRGHRRTYIGSMPGKVIQKMAKVGVKNPLF CHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCCHHHHCCCCCHHHHHHHHHCCCCCCHH LLDEIDKMSSDMRGDPASALLEVLDPEQNATFNDHYLEVDYDLSDVMFVATSNSMDIPGP HHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCH LLDRMEVIRLSGYTEDEKLNIAKQHLLNKQIERNGLKAAEIKVEDSAIVGIIRYYTREAG HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHH VRSLERELSKICRKVVKMILLDKSVKSVTVNQDNLKSFLGVQRFDYGKAESKNQIGQVTG HHHHHHHHHHHHHHHHHHHHHCCCHHEEECCHHHHHHHHHHHHCCCCCCCCCHHHHHHHC LAWTQVGGDLLTIEATSVPGKGKLTYTGSLGDVMQESIQAAMTVVRARAEQLGINADFYE CHHHHCCCCEEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC KRDIHVHVPEGATPKDGPSAGAAMCTALVSSLTGNPVRSDVAMTGEITLRGEVLPIGGLK CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECEEEECCCHH EKLLAAHRGGIKLVLIPKENERDLEEIPANVIADLEIRPVRWVDEVLKLALERPVEGFEV HHHHHHHCCCEEEEEECCCCCCCHHHCCHHHEECCCCCCHHHHHHHHHHHHHCCCHHHHH VKNLA HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8981986; 12620739 [H]