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The map label for this gene is ybfL [H]

Identifier: 160874712

GI number: 160874712

Start: 1923657

End: 1924757

Strand: Reverse

Name: ybfL [H]

Synonym: Sbal195_1595

Alternate gene names: 160874712

Gene position: 1924757-1923657 (Counterclockwise)

Preceding gene: 160874713

Following gene: 160874711

Centisome position: 36.0

GC content: 44.78

Gene sequence:

>1101_bases
ATGTCCTTATTTGAACACTTGAAACTCATCGAAGACCCTCGCTCTCACATCAACCTAGATCATGATTTAGTTGATATTAT
TTTTCTTGTTTTAGCCGCAATTGCTTCAGGTTGTGATGGCTGGCAAGCTATTGAAGAATTCGGCCAAGAGAATCTATCTT
GGCTGCGTCAACATCGAAATTTTGATAAAGGGATCCCAACTCGGCATTCCATTGCTCGGATCATTAAAGTGATCGATACC
GAAATACTGGTTATGACACTCTTTAGTTGGGCAAATAGTTTAAGAGAAACCTCATCCAAGCCATTAATCGCTATTGACGG
CAAAACCTTGCGGGGTGCTGTTAATCAACATGGTACTAAAAATGCGCTACACCTCGTTTCGGCCTTTGATACCGAACAAG
GAATTGTGCTGTATCAGCAAGATACACAGACCAAAGGTAACGAAATCGCAACGGTTCAAGCGCTGTTGCACATGTTAGAC
ATTAAAGATGCTGTTGTAACGTTTGATGCACTTCACTGCCAGCGGGAAACGCTTCAACAAATCATCAAAGCTAAAGGCGA
CTATGTTGTTCAGGTAAAAGGCAACCAACCGCTACTGAGGCAGGCCATTGAGATGCAATTTCAACCTCACTGGGATAACG
ACGGCGTCGACATATTAAGTATCGAAGAGGATGACAAGGGGCATGGCCGTAAGGAGCGTCGCACAACGTTTCAAATTCCT
GCAAAGCTGCCACAGGCGCTCGCGAAAAAGTGGCCATCAGCCAAGTCACTCATAGCAGTTGAACGTCAACGAACATGTAA
AGGCATTGCAACCATAAATACGGATTATTACTTAAGTTCCTTACCGTTAGACGTCGAACTTGCAGCCAAAGCGGTGCGTC
AGCATTGGCACATCGAGAACCTGCAACACTGGGTGCTTGACGTCACTTTTAGGGAAGACTGTTCAAGGATTGGTGACCGT
GAAAACGCGAAGAAGATGGCGCTATTTCGTCGTATCGTGCTGAACCTTTTAGAGCAGCATCCGCTAAAAGCCAGCAAACC
AACCAAGATAAGAAAAGCTGCATGGAATGGCGATTTTAGGAGCGAGATTTTCTTTGGTTAA

Upstream 100 bases:

>100_bases
CAATGGTAGAACCAGGGCGGGATCATACTTTGTTAACAGTAGGGAACTTCTTCCTATCTGCATGATCTGATCGGGCATGT
TATTCTACTGAGCCTAATCC

Downstream 100 bases:

>100_bases
GAGATTTAACAAAGCTTAATCCCGCCCTGATGGTAGAACACGCTGCCCCTGATCTTGATTCGCTTAAAAATGATGCGATT
AACGATCCCTCGTTTATCAG

Product: transposase IS4 family protein

Products: NA

Alternate protein names: H repeat-associated protein in rhsC-phrB intergenic region; ORF-H2 [H]

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MSLFEHLKLIEDPRSHINLDHDLVDIIFLVLAAIASGCDGWQAIEEFGQENLSWLRQHRNFDKGIPTRHSIARIIKVIDT
EILVMTLFSWANSLRETSSKPLIAIDGKTLRGAVNQHGTKNALHLVSAFDTEQGIVLYQQDTQTKGNEIATVQALLHMLD
IKDAVVTFDALHCQRETLQQIIKAKGDYVVQVKGNQPLLRQAIEMQFQPHWDNDGVDILSIEEDDKGHGRKERRTTFQIP
AKLPQALAKKWPSAKSLIAVERQRTCKGIATINTDYYLSSLPLDVELAAKAVRQHWHIENLQHWVLDVTFREDCSRIGDR
ENAKKMALFRRIVLNLLEQHPLKASKPTKIRKAAWNGDFRSEIFFG

Sequences:

>Translated_366_residues
MSLFEHLKLIEDPRSHINLDHDLVDIIFLVLAAIASGCDGWQAIEEFGQENLSWLRQHRNFDKGIPTRHSIARIIKVIDT
EILVMTLFSWANSLRETSSKPLIAIDGKTLRGAVNQHGTKNALHLVSAFDTEQGIVLYQQDTQTKGNEIATVQALLHMLD
IKDAVVTFDALHCQRETLQQIIKAKGDYVVQVKGNQPLLRQAIEMQFQPHWDNDGVDILSIEEDDKGHGRKERRTTFQIP
AKLPQALAKKWPSAKSLIAVERQRTCKGIATINTDYYLSSLPLDVELAAKAVRQHWHIENLQHWVLDVTFREDCSRIGDR
ENAKKMALFRRIVLNLLEQHPLKASKPTKIRKAAWNGDFRSEIFFG
>Mature_365_residues
SLFEHLKLIEDPRSHINLDHDLVDIIFLVLAAIASGCDGWQAIEEFGQENLSWLRQHRNFDKGIPTRHSIARIIKVIDTE
ILVMTLFSWANSLRETSSKPLIAIDGKTLRGAVNQHGTKNALHLVSAFDTEQGIVLYQQDTQTKGNEIATVQALLHMLDI
KDAVVTFDALHCQRETLQQIIKAKGDYVVQVKGNQPLLRQAIEMQFQPHWDNDGVDILSIEEDDKGHGRKERRTTFQIPA
KLPQALAKKWPSAKSLIAVERQRTCKGIATINTDYYLSSLPLDVELAAKAVRQHWHIENLQHWVLDVTFREDCSRIGDRE
NAKKMALFRRIVLNLLEQHPLKASKPTKIRKAAWNGDFRSEIFFG

Specific function: Unknown

COG id: COG5433

COG function: function code L; Transposase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

Organism=Escherichia coli, GI1789896, Length=373, Percent_Identity=35.656836461126, Blast_Score=225, Evalue=4e-60,
Organism=Escherichia coli, GI1787733, Length=373, Percent_Identity=35.1206434316354, Blast_Score=222, Evalue=3e-59,
Organism=Escherichia coli, GI1786924, Length=246, Percent_Identity=36.9918699186992, Blast_Score=165, Evalue=3e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 41740; Mature: 41609

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFEHLKLIEDPRSHINLDHDLVDIIFLVLAAIASGCDGWQAIEEFGQENLSWLRQHRN
CCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
FDKGIPTRHSIARIIKVIDTEILVMTLFSWANSLRETSSKPLIAIDGKTLRGAVNQHGTK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHCCCCH
NALHLVSAFDTEQGIVLYQQDTQTKGNEIATVQALLHMLDIKDAVVTFDALHCQRETLQQ
HHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIKAKGDYVVQVKGNQPLLRQAIEMQFQPHWDNDGVDILSIEEDDKGHGRKERRTTFQIP
HHHCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHCCEEECC
AKLPQALAKKWPSAKSLIAVERQRTCKGIATINTDYYLSSLPLDVELAAKAVRQHWHIEN
HHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCHHHHCCCCCHHHHHHHHHHHHCHHH
LQHWVLDVTFREDCSRIGDRENAKKMALFRRIVLNLLEQHPLKASKPTKIRKAAWNGDFR
HHHHHHEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCC
SEIFFG
CCCCCC
>Mature Secondary Structure 
SLFEHLKLIEDPRSHINLDHDLVDIIFLVLAAIASGCDGWQAIEEFGQENLSWLRQHRN
CHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
FDKGIPTRHSIARIIKVIDTEILVMTLFSWANSLRETSSKPLIAIDGKTLRGAVNQHGTK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHCCCCH
NALHLVSAFDTEQGIVLYQQDTQTKGNEIATVQALLHMLDIKDAVVTFDALHCQRETLQQ
HHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIKAKGDYVVQVKGNQPLLRQAIEMQFQPHWDNDGVDILSIEEDDKGHGRKERRTTFQIP
HHHCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHCCEEECC
AKLPQALAKKWPSAKSLIAVERQRTCKGIATINTDYYLSSLPLDVELAAKAVRQHWHIEN
HHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCHHHHCCCCCHHHHHHHHHHHHCHHH
LQHWVLDVTFREDCSRIGDRENAKKMALFRRIVLNLLEQHPLKASKPTKIRKAAWNGDFR
HHHHHHEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCC
SEIFFG
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8387990; 8905232; 9278503 [H]