| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874674
Identifier: 160874674
GI number: 160874674
Start: 1877018
End: 1878151
Strand: Reverse
Name: 160874674
Synonym: Sbal195_1557
Alternate gene names: NA
Gene position: 1878151-1877018 (Counterclockwise)
Preceding gene: 160874675
Following gene: 160874671
Centisome position: 35.12
GC content: 33.95
Gene sequence:
>1134_bases GTGTCTTCTGCAATTACTTTCAACATCACGAAGGAGTTCGTCAAAAAATTTCTTGATAGCTCGCTTTCTAGCAAGTTTGA AGAATCATTATTCCTATCCAGAGGAATAGAAAGAACTAATACACAAAAGATTAGTACAATCACAGGGTGGTACCGTTCTC AAAGACTTGTGATAGTTCTTGGAGCTGGCTGCTCTGTTTCATATGGCCTACCTGATTGGAACACTTTACTCCAAAAACTA CTATTGATAACAATAAAAACGGATGATGAAAACGACAACAACCTTGAAAAAGCAGGTATTTTAGCAAGAACTTTTAATCG TATATTTGAACCTAACTCATTAATATCAGCTAGATACCTTAATAATTATTTTAGAAAGACAAAACCTGACTCTAAGTTGG CATTTGAAAACGCCATACGTGATGCGTTATATATAGGAGTGAAGACAGATGATGACTCTGATTTACTCAAAGAAATACGT AAGTTTTGTATTGCCGCAGGGAAAAGCCCAAATTTAGACTCCATTATTACCTATAACTACGATGATCTGATGGAACAGTG CCTTCGAAATATTGATGTGGATATACCGTTCAAACCAATCCATGCGAGAGGAATGAAACACGAACATCATCAGCTTCCAA TTTATCATGTACATGGTTATTTACCGCAAAAAGGACAGTTAACAACTAAAAATAAGGTTGTTTTAAGTGAAGATGGTTAT CACCAGCAATATAGTGATGTCTATGGGTGGAGTAACTTGATACAGATAAATAAGTTCAAAGACCATAACTGCCTTTTTAT TGGGCTATCTTTTTCGGACCCAAACTTACGTAGATTGCTTGATATTGCAAAAAATGAACGAGGTGATGAAGATATTCATC ATTATTGTTTCAAGAAAAGACATGACAAGTTAGAAGTTAAAGCACAACTTGAGAAACTTTTATCCGAAAATGAAGAGATT CTAGATGAAAAAACAAGAGCTCAATTAGGCTTAGATGACGTTGTAGAAGAATTAATTAAGTTAATGGAAAAATTTGAAGA AAATGATGCACTATCTTTTGGAGTTGGAATTTCATGGATAAACTCTTACGATGAAATACCTAAAACATTAAAAAAAATAA GACTTGGAATATAG
Upstream 100 bases:
>100_bases ACTAGAAATAATTAACAAATTACATTCATATAAAAATTTTATTTCTTTCCTAGTTAAATTATTCACTGTTTAAAGCATTA TATGTCACAAGGATAATTAA
Downstream 100 bases:
>100_bases TTTTTATTAAGAATAATTTAATTACTGGCATAACTACAAGTGTACTGGTCAACCCAAACTGGACACTTTTAGTTGAGAAT TTTCAAACTCTACAGGTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MSSAITFNITKEFVKKFLDSSLSSKFEESLFLSRGIERTNTQKISTITGWYRSQRLVIVLGAGCSVSYGLPDWNTLLQKL LLITIKTDDENDNNLEKAGILARTFNRIFEPNSLISARYLNNYFRKTKPDSKLAFENAIRDALYIGVKTDDDSDLLKEIR KFCIAAGKSPNLDSIITYNYDDLMEQCLRNIDVDIPFKPIHARGMKHEHHQLPIYHVHGYLPQKGQLTTKNKVVLSEDGY HQQYSDVYGWSNLIQINKFKDHNCLFIGLSFSDPNLRRLLDIAKNERGDEDIHHYCFKKRHDKLEVKAQLEKLLSENEEI LDEKTRAQLGLDDVVEELIKLMEKFEENDALSFGVGISWINSYDEIPKTLKKIRLGI
Sequences:
>Translated_377_residues MSSAITFNITKEFVKKFLDSSLSSKFEESLFLSRGIERTNTQKISTITGWYRSQRLVIVLGAGCSVSYGLPDWNTLLQKL LLITIKTDDENDNNLEKAGILARTFNRIFEPNSLISARYLNNYFRKTKPDSKLAFENAIRDALYIGVKTDDDSDLLKEIR KFCIAAGKSPNLDSIITYNYDDLMEQCLRNIDVDIPFKPIHARGMKHEHHQLPIYHVHGYLPQKGQLTTKNKVVLSEDGY HQQYSDVYGWSNLIQINKFKDHNCLFIGLSFSDPNLRRLLDIAKNERGDEDIHHYCFKKRHDKLEVKAQLEKLLSENEEI LDEKTRAQLGLDDVVEELIKLMEKFEENDALSFGVGISWINSYDEIPKTLKKIRLGI >Mature_376_residues SSAITFNITKEFVKKFLDSSLSSKFEESLFLSRGIERTNTQKISTITGWYRSQRLVIVLGAGCSVSYGLPDWNTLLQKLL LITIKTDDENDNNLEKAGILARTFNRIFEPNSLISARYLNNYFRKTKPDSKLAFENAIRDALYIGVKTDDDSDLLKEIRK FCIAAGKSPNLDSIITYNYDDLMEQCLRNIDVDIPFKPIHARGMKHEHHQLPIYHVHGYLPQKGQLTTKNKVVLSEDGYH QQYSDVYGWSNLIQINKFKDHNCLFIGLSFSDPNLRRLLDIAKNERGDEDIHHYCFKKRHDKLEVKAQLEKLLSENEEIL DEKTRAQLGLDDVVEELIKLMEKFEENDALSFGVGISWINSYDEIPKTLKKIRLGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43530; Mature: 43399
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAITFNITKEFVKKFLDSSLSSKFEESLFLSRGIERTNTQKISTITGWYRSQRLVIVL CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEE GAGCSVSYGLPDWNTLLQKLLLITIKTDDENDNNLEKAGILARTFNRIFEPNSLISARYL ECCCEEECCCCCHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH NNYFRKTKPDSKLAFENAIRDALYIGVKTDDDSDLLKEIRKFCIAAGKSPNLDSIITYNY HHHHHHCCCCHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEEECH DDLMEQCLRNIDVDIPFKPIHARGMKHEHHQLPIYHVHGYLPQKGQLTTKNKVVLSEDGY HHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCC HQQYSDVYGWSNLIQINKFKDHNCLFIGLSFSDPNLRRLLDIAKNERGDEDIHHYCFKKR HHHHHHHCCCHHEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHH HDKLEVKAQLEKLLSENEEILDEKTRAQLGLDDVVEELIKLMEKFEENDALSFGVGISWI CCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEECCCHHHH NSYDEIPKTLKKIRLGI HHHHHHHHHHHHHHCCC >Mature Secondary Structure SSAITFNITKEFVKKFLDSSLSSKFEESLFLSRGIERTNTQKISTITGWYRSQRLVIVL CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEE GAGCSVSYGLPDWNTLLQKLLLITIKTDDENDNNLEKAGILARTFNRIFEPNSLISARYL ECCCEEECCCCCHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH NNYFRKTKPDSKLAFENAIRDALYIGVKTDDDSDLLKEIRKFCIAAGKSPNLDSIITYNY HHHHHHCCCCHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCEEEECH DDLMEQCLRNIDVDIPFKPIHARGMKHEHHQLPIYHVHGYLPQKGQLTTKNKVVLSEDGY HHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCC HQQYSDVYGWSNLIQINKFKDHNCLFIGLSFSDPNLRRLLDIAKNERGDEDIHHYCFKKR HHHHHHHCCCHHEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHH HDKLEVKAQLEKLLSENEEILDEKTRAQLGLDDVVEELIKLMEKFEENDALSFGVGISWI CCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEECCCHHHH NSYDEIPKTLKKIRLGI HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA