| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is lpxA [H]
Identifier: 160874610
GI number: 160874610
Start: 1795673
End: 1796443
Strand: Direct
Name: lpxA [H]
Synonym: Sbal195_1493
Alternate gene names: 160874610
Gene position: 1795673-1796443 (Clockwise)
Preceding gene: 160874609
Following gene: 160874611
Centisome position: 33.58
GC content: 47.6
Gene sequence:
>771_bases GTGATAGATACATTAGCGTTTGTGCATCCCGATGCAAAAATTGGCAATAACGTCACTATTGGCCCTTGGACCTATATCGG TGCAGGCGTTGAAATTGGCGATGATTGTTGGTTGAGTTCCCATGTGGTTGTTAAAGGCCCAACGATTATCGGCAAAGGTA ATCGTATTTTTCAGTTCGCCTCAGTAGGCGAAGAGTGCCAAGACAAAAAGTATGCTGGCGAACCCACACGACTGATCATT GGTGACAATAACGTCATCCGTGAAAACGTGACTATCCACCGCGGTACAGTCCAAGATAACAGTGAGACGCGTATTGGGTC GAACAACCTGTTTATGAACTATGTACATATCGCCCATGACTGTGTGGTCGGCGACAATGTGATCATGGCCAATAACGCTT CTATCGCGGGTCACGTACATGTGGGTGATTGGGCGATTTTAGGCGGCATGACAGGTGTTCACCAGTTTGTGCATATCGGT GCCCATGCGTTTACTGCAGGTTGTTCTTTAGTGCTGCAGGATGTACCTCCCTTTGTGATGGCGGCGGGTCAACCGACGAT TCCACGCGGTTTAAACAGCGAAGGCATGAAGCGTCGTGGTTTTTCTAAAGAAAGCCAATTGGCAGTGCGCCGTGCTTATA AAACCTTATATCGCAGCAGCTTGACAGTTGAAGAAGCGATTGAAGCGTTGGCTGAAGATGCGCAGAACGATGAGCAAGTG AAATTGTTCCTTGAATTTGTAAAGTCATCGAGTCGCGGCATTATTCGCTAA
Upstream 100 bases:
>100_bases AAGAGCGCCGCGGGATTGGCGTCTTCTACGGTGAGGCCAAAGTGGATGGTGAAGTGGTTTGTTCCGCTGAAATCATGTGT GCCCGCAGAGAGATTAGTCA
Downstream 100 bases:
>100_bases CTTGATGACCACACGACAACAAAAGGGCATTTTTATGCCCTTTTGTATTATTGGCTTAAGCCTACTAGGTGGTTAGACGT TTTTGTTAGCAATGTCCTTG
Product: UDP-N-acetylglucosamine acyltransferase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine acyltransferase [H]
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MIDTLAFVHPDAKIGNNVTIGPWTYIGAGVEIGDDCWLSSHVVVKGPTIIGKGNRIFQFASVGEECQDKKYAGEPTRLII GDNNVIRENVTIHRGTVQDNSETRIGSNNLFMNYVHIAHDCVVGDNVIMANNASIAGHVHVGDWAILGGMTGVHQFVHIG AHAFTAGCSLVLQDVPPFVMAAGQPTIPRGLNSEGMKRRGFSKESQLAVRRAYKTLYRSSLTVEEAIEALAEDAQNDEQV KLFLEFVKSSSRGIIR
Sequences:
>Translated_256_residues MIDTLAFVHPDAKIGNNVTIGPWTYIGAGVEIGDDCWLSSHVVVKGPTIIGKGNRIFQFASVGEECQDKKYAGEPTRLII GDNNVIRENVTIHRGTVQDNSETRIGSNNLFMNYVHIAHDCVVGDNVIMANNASIAGHVHVGDWAILGGMTGVHQFVHIG AHAFTAGCSLVLQDVPPFVMAAGQPTIPRGLNSEGMKRRGFSKESQLAVRRAYKTLYRSSLTVEEAIEALAEDAQNDEQV KLFLEFVKSSSRGIIR >Mature_256_residues MIDTLAFVHPDAKIGNNVTIGPWTYIGAGVEIGDDCWLSSHVVVKGPTIIGKGNRIFQFASVGEECQDKKYAGEPTRLII GDNNVIRENVTIHRGTVQDNSETRIGSNNLFMNYVHIAHDCVVGDNVIMANNASIAGHVHVGDWAILGGMTGVHQFVHIG AHAFTAGCSLVLQDVPPFVMAAGQPTIPRGLNSEGMKRRGFSKESQLAVRRAYKTLYRSSLTVEEAIEALAEDAQNDEQV KLFLEFVKSSSRGIIR
Specific function: Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell [H]
COG id: COG1043
COG function: function code M; Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family. LpxA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786378, Length=262, Percent_Identity=56.8702290076336, Blast_Score=291, Evalue=3e-80, Organism=Escherichia coli, GI1786376, Length=237, Percent_Identity=28.2700421940928, Blast_Score=77, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001451 - InterPro: IPR010137 - InterPro: IPR011004 [H]
Pfam domain/function: PF00132 Hexapep [H]
EC number: =2.3.1.129 [H]
Molecular weight: Translated: 27842; Mature: 27842
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDTLAFVHPDAKIGNNVTIGPWTYIGAGVEIGDDCWLSSHVVVKGPTIIGKGNRIFQFA CCCCEEEECCCCCCCCEEEECCHHEEECCEEECCCCEECCEEEEECCEEEECCCEEEEEH SVGEECQDKKYAGEPTRLIIGDNNVIRENVTIHRGTVQDNSETRIGSNNLFMNYVHIAHD HCCHHHHCCCCCCCCCEEEECCCCEEECCEEEEECCCCCCCCCEECCCCEEEEEEEEHHH CVVGDNVIMANNASIAGHVHVGDWAILGGMTGVHQFVHIGAHAFTAGCSLVLQDVPPFVM EEECCCEEEECCCCEEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE AAGQPTIPRGLNSEGMKRRGFSKESQLAVRRAYKTLYRSSLTVEEAIEALAEDAQNDEQV ECCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHH KLFLEFVKSSSRGIIR HHHHHHHHCCCCCCCC >Mature Secondary Structure MIDTLAFVHPDAKIGNNVTIGPWTYIGAGVEIGDDCWLSSHVVVKGPTIIGKGNRIFQFA CCCCEEEECCCCCCCCEEEECCHHEEECCEEECCCCEECCEEEEECCEEEECCCEEEEEH SVGEECQDKKYAGEPTRLIIGDNNVIRENVTIHRGTVQDNSETRIGSNNLFMNYVHIAHD HCCHHHHCCCCCCCCCEEEECCCCEEECCEEEEECCCCCCCCCEECCCCEEEEEEEEHHH CVVGDNVIMANNASIAGHVHVGDWAILGGMTGVHQFVHIGAHAFTAGCSLVLQDVPPFVM EEECCCEEEECCCCEEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE AAGQPTIPRGLNSEGMKRRGFSKESQLAVRRAYKTLYRSSLTVEEAIEALAEDAQNDEQV ECCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHH KLFLEFVKSSSRGIIR HHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA