| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is fabZ
Identifier: 160874609
GI number: 160874609
Start: 1795212
End: 1795676
Strand: Direct
Name: fabZ
Synonym: Sbal195_1492
Alternate gene names: 160874609
Gene position: 1795212-1795676 (Clockwise)
Preceding gene: 160874608
Following gene: 160874610
Centisome position: 33.57
GC content: 45.59
Gene sequence:
>465_bases GTGTCTAATCAAATGAACACTATGGATATTAAAGAAATACTTAAATATCTGCCCCATAGATATCCATTCTTATTGATCGA TCGTGTGCTGGACTACACCCCGGGTGTCAGTCTGCAGGCGATTAAAAACGTTTCAATAAATGAGCCATTTTTTCAGGGAC ATTTCCCGATTCAGCCTGTGATGCCAGGCGTGCTTATTTTAGAAGCCATGGCGCAGGCAACTGGCCTGTTAGCCTTTAAA ACCATGAGCAGTGATGTGCCGCCTCCAGGGGTGTTGTATTACTTTGCTGGTATCGACAATGCGCGTTTTAGACGTGTTGT TGAGCCAGGAGATCAAATCCATTTTGATGTCAAAATGATTAAAGAGCGCCGCGGGATTGGCGTCTTCTACGGTGAGGCCA AAGTGGATGGTGAAGTGGTTTGTTCCGCTGAAATCATGTGTGCCCGCAGAGAGATTAGTCAGTGA
Upstream 100 bases:
>100_bases TTCCGTCAGTTAGATGAACTGTTCCATCGTGTTAAAACGTTGGAAAAAAATTTAAAAACACCAGATTAATTGCTCCAAGG CAATTTGAGGAACTCGGTTC
Downstream 100 bases:
>100_bases TAGATACATTAGCGTTTGTGCATCCCGATGCAAAAATTGGCAATAACGTCACTATTGGCCCTTGGACCTATATCGGTGCA GGCGTTGAAATTGGCGATGA
Product: (3R)-hydroxymyristoyl-ACP dehydratase
Products: NA
Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSNQMNTMDIKEILKYLPHRYPFLLIDRVLDYTPGVSLQAIKNVSINEPFFQGHFPIQPVMPGVLILEAMAQATGLLAFK TMSSDVPPPGVLYYFAGIDNARFRRVVEPGDQIHFDVKMIKERRGIGVFYGEAKVDGEVVCSAEIMCARREISQ
Sequences:
>Translated_154_residues MSNQMNTMDIKEILKYLPHRYPFLLIDRVLDYTPGVSLQAIKNVSINEPFFQGHFPIQPVMPGVLILEAMAQATGLLAFK TMSSDVPPPGVLYYFAGIDNARFRRVVEPGDQIHFDVKMIKERRGIGVFYGEAKVDGEVVCSAEIMCARREISQ >Mature_153_residues SNQMNTMDIKEILKYLPHRYPFLLIDRVLDYTPGVSLQAIKNVSINEPFFQGHFPIQPVMPGVLILEAMAQATGLLAFKT MSSDVPPPGVLYYFAGIDNARFRRVVEPGDQIHFDVKMIKERRGIGVFYGEAKVDGEVVCSAEIMCARREISQ
Specific function: Involved in saturated fatty acids biosynthesis
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioester dehydratase family. FabZ subfamily
Homologues:
Organism=Escherichia coli, GI1786377, Length=149, Percent_Identity=62.4161073825503, Blast_Score=192, Evalue=1e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FABZ_SHEB2 (B8E7Q5)
Other databases:
- EMBL: CP001252 - RefSeq: YP_002358800.1 - ProteinModelPortal: B8E7Q5 - SMR: B8E7Q5 - GeneID: 7089460 - GenomeReviews: CP001252_GR - KEGG: sbp:Sbal223_2891 - HOGENOM: HBG433282 - OMA: KERRGVA - ProtClustDB: PRK00006 - GO: GO:0005737 - HAMAP: MF_00406 - InterPro: IPR013114 - InterPro: IPR010084 - TIGRFAMs: TIGR01750
Pfam domain/function: PF07977 FabA
EC number: 4.2.1.-
Molecular weight: Translated: 17367; Mature: 17235
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: ACT_SITE 54-54
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNQMNTMDIKEILKYLPHRYPFLLIDRVLDYTPGVSLQAIKNVSINEPFFQGHFPIQPV CCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCHH MPGVLILEAMAQATGLLAFKTMSSDVPPPGVLYYFAGIDNARFRRVVEPGDQIHFDVKMI CHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEECCCCHHHHHHCCCCCEEEHHHHHH KERRGIGVFYGEAKVDGEVVCSAEIMCARREISQ HHHCCCEEEECCCCCCCEEEEHHHHHHHHHHHCC >Mature Secondary Structure SNQMNTMDIKEILKYLPHRYPFLLIDRVLDYTPGVSLQAIKNVSINEPFFQGHFPIQPV CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCHH MPGVLILEAMAQATGLLAFKTMSSDVPPPGVLYYFAGIDNARFRRVVEPGDQIHFDVKMI CHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEECCCCHHHHHHCCCCCEEEHHHHHH KERRGIGVFYGEAKVDGEVVCSAEIMCARREISQ HHHCCCEEEECCCCCCCEEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA