| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yaeT [H]
Identifier: 160874606
GI number: 160874606
Start: 1791109
End: 1793589
Strand: Direct
Name: yaeT [H]
Synonym: Sbal195_1489
Alternate gene names: 160874606
Gene position: 1791109-1793589 (Clockwise)
Preceding gene: 160874605
Following gene: 160874607
Centisome position: 33.5
GC content: 45.55
Gene sequence:
>2481_bases ATGAGATTGAATAAACTTTTTGCCTCGATGTTATTCGTCGGTGCGTCGTTTTCAGGGACTGTGTTGGCTGATACTTTCCA ACCGTTTGAAGTGACCGACATCCAAGTTGAAGGTTTGCAGCGAGTTGCACTCGGTGCTGCCCTGTTAAGCTTACCAGTAA AAGTAGGTGACACTGTTGACCAGTTAAGAATTCAACAAGCCATTAAAAGCTTGTATGCATCGACTAACTTTGAAAATGTC TCCGTGAGCCGAGATGGCGGCGTATTAGTGGTGAAAGTCACTGAACGTCCTACCATCAGTGCCGTGACATTCGATGGCAA CAAAGACATTAAAGACGAACAGTTACAGGAAAGTCTGGACGGTTCTGGCGTTAAAGTCGGTGAGTCGCTCGATCGCACTA TGTTGACCGGTATTGAAAAGGGTCTGCAGGATTTCTACTACGGCGTGGGTAAATACGGCGCTAAAGTGGAAGCTCAAGTG ATCAACTTACCCCGTAACCGGGTTGAGCTGAAATTTAAGTTCACCGAAGGTTTAGCGGCCGAAATACGCCAAATTAACGT GGTCGGTAATCATGAGTTCACCGATGCTGAGTTGATTGGCATGCTGGAACTTAAAGATTATGTGGCTTGGTGGGATCTGT TCGGCGAACGCCGTTATCAGAAACAAAAGCTGCAGGCTGATCTCGAGACCATCAAAACCTATTATCACAATAAAGGTTAT ATCCGCTTTGAAGTCACCTCGACTCAAGTGGCGATGACGCCTGACCGTAAAGGTTTATATATCACCATCAACGTAGATGA AGGTGAGAAATATAAAGTTAAAGAAGTAAACCTGACGGGTGATTTGATGGGCCGTGAAGAGTTGATGAAATCAATTCTGC CGATCAAAGCGGGTGATATGTACAACGGCGGTGATGTGACTTTCACCGAAGAAATGTACAGCAAATATTTAGGCCGCTTC GGTTATGCCTACCCAGAAGTCAAAACGTATCCTGAAATTGATGATAAGACTAAAGAAGTGACCTTAAACATCAATGTTAA ACCGGGTAAACGTGTTTACGTGCGTGCGATTAACTTCACTGGTAACACAGTGACCAAAGATGAAGTGATGCGCCGTGAAC TGCGTCAGATGGAAGGGGCTTGGTTAAACTCAGCGCAAGTTGAGCAATCTAAAGCGCGTCTTAACCGTTTGGGCTTCTTC GAAACCGTTGACACTGAAACCATTCAAGTGCCAGGTACCGATGATTTAGTCGATGTTGCGGTGAAAGTGAAAGAGCAGCC GTCGGGCTCATTCAACGCCGGTGTCGGTTATGGTACTGAATCAGGCCTGAGCTTACAGTTTGGTGTGCAGCAAAATAACT TCTTAGGCACAGGTAACCAAGCGGGTATCAGCTTGAGCACCAACAAGTATTCTAAGAACGTTAACTTATCTTATACCGAT CCGTATTGGACGAAAGATGGCGTGAGTTTAGGGGGGAGCGTTTATTGGAGCGAGTTTGACGCCAATGAAGCGAACTTAGA GCGTTATAAAAACAGTTCTTACGGTGTGGCGTTGAACTCGGGTTTCCCGATCAACGAATACAATCGTATCAATGGTGGCA TAGGCTATCGTCATAACACGATTTCTGAAATTTCTGCCTATGAACAAGCACTGCGTTTCTATAACATCTACCGTGATGAC GATCCAAATGCGGACTTAAGTTTTGATAACTTTGAACTGAGTCTGGGCTGGTATCGTAGCACCTTGAACCGTGGCACTTT CCCAACAGACGGCTCGTCTCAGCGTTTGAACGGTAAAATGACTTCGCCAGGGTCTGATTTACAGTATTTTAAGACAGACT TTGACACTAACTTCTATTTCCCTATTAACCGTAGTCAGAGCTTTGTGCTCTTGGCCCGTGGTCGATTAGGTTATGGTAAC GGTTATGGTCAATTTAATGATAACGACCAAATTCTGCCTTTCTGGGAAAACTATTACTCAGGTGGTAGCAGTTCACTGCG TGGCTTTAAGTCTAACTCTGTGGGGCCTCGTTCATTCTATCTCTACCGAGGTAGTGAACCATGTGCACCGGATCCATCGG GCGATGGTTGTAGTTTGCCGGGCGATCCTAACAGTATCCAAGTGAGTTCTGGCCGTTCAATCGGTGGTAACGCCCTTGCG ACAGCGAGCATGGAGTTGATTGTACCGACGCCATTCTTGGATGAGGCTTACACAAACTCAGTTCGTACGAGTTTCTTCGT TGATGCGGGTAACGTTTGGGATACTGAGTTTGATTACAATGCATATCAAACACTTCCAGCGGACGAGTTTGCTAAGTTAC AGGACTACAGTGATCCAGCACGTTTACGCGCTTCTTGGGGCTTAAGTGTGCAGTGGTTATCACCTATGGGTCCTATGGTG TTTAGCTTAGCGTGGCCGATTAAAGAATACGAAGGCGACCAAACAGAGATCTTCTCTTTCAATATTGGCAAAACTTTTTA A
Upstream 100 bases:
>100_bases AGATTTGGGGCAGCAATACTGCTGATGTTGATGAGCATTGCGCTTTTCAATGATTTTGCCCGACTCTGAGCAAGGACAGA CTAATAATTAGAAGTGCTCT
Downstream 100 bases:
>100_bases AAGGCATACACTCGGCAAGTTTTGCTGACTATAACAAGGTAACAAGGAGTTTATTTTGAACAAGATGGTAAATCGCGCGC TGATGACGTTAGTTTTGTTA
Product: surface antigen (D15)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 826; Mature: 826
Protein sequence:
>826_residues MRLNKLFASMLFVGASFSGTVLADTFQPFEVTDIQVEGLQRVALGAALLSLPVKVGDTVDQLRIQQAIKSLYASTNFENV SVSRDGGVLVVKVTERPTISAVTFDGNKDIKDEQLQESLDGSGVKVGESLDRTMLTGIEKGLQDFYYGVGKYGAKVEAQV INLPRNRVELKFKFTEGLAAEIRQINVVGNHEFTDAELIGMLELKDYVAWWDLFGERRYQKQKLQADLETIKTYYHNKGY IRFEVTSTQVAMTPDRKGLYITINVDEGEKYKVKEVNLTGDLMGREELMKSILPIKAGDMYNGGDVTFTEEMYSKYLGRF GYAYPEVKTYPEIDDKTKEVTLNINVKPGKRVYVRAINFTGNTVTKDEVMRRELRQMEGAWLNSAQVEQSKARLNRLGFF ETVDTETIQVPGTDDLVDVAVKVKEQPSGSFNAGVGYGTESGLSLQFGVQQNNFLGTGNQAGISLSTNKYSKNVNLSYTD PYWTKDGVSLGGSVYWSEFDANEANLERYKNSSYGVALNSGFPINEYNRINGGIGYRHNTISEISAYEQALRFYNIYRDD DPNADLSFDNFELSLGWYRSTLNRGTFPTDGSSQRLNGKMTSPGSDLQYFKTDFDTNFYFPINRSQSFVLLARGRLGYGN GYGQFNDNDQILPFWENYYSGGSSSLRGFKSNSVGPRSFYLYRGSEPCAPDPSGDGCSLPGDPNSIQVSSGRSIGGNALA TASMELIVPTPFLDEAYTNSVRTSFFVDAGNVWDTEFDYNAYQTLPADEFAKLQDYSDPARLRASWGLSVQWLSPMGPMV FSLAWPIKEYEGDQTEIFSFNIGKTF
Sequences:
>Translated_826_residues MRLNKLFASMLFVGASFSGTVLADTFQPFEVTDIQVEGLQRVALGAALLSLPVKVGDTVDQLRIQQAIKSLYASTNFENV SVSRDGGVLVVKVTERPTISAVTFDGNKDIKDEQLQESLDGSGVKVGESLDRTMLTGIEKGLQDFYYGVGKYGAKVEAQV INLPRNRVELKFKFTEGLAAEIRQINVVGNHEFTDAELIGMLELKDYVAWWDLFGERRYQKQKLQADLETIKTYYHNKGY IRFEVTSTQVAMTPDRKGLYITINVDEGEKYKVKEVNLTGDLMGREELMKSILPIKAGDMYNGGDVTFTEEMYSKYLGRF GYAYPEVKTYPEIDDKTKEVTLNINVKPGKRVYVRAINFTGNTVTKDEVMRRELRQMEGAWLNSAQVEQSKARLNRLGFF ETVDTETIQVPGTDDLVDVAVKVKEQPSGSFNAGVGYGTESGLSLQFGVQQNNFLGTGNQAGISLSTNKYSKNVNLSYTD PYWTKDGVSLGGSVYWSEFDANEANLERYKNSSYGVALNSGFPINEYNRINGGIGYRHNTISEISAYEQALRFYNIYRDD DPNADLSFDNFELSLGWYRSTLNRGTFPTDGSSQRLNGKMTSPGSDLQYFKTDFDTNFYFPINRSQSFVLLARGRLGYGN GYGQFNDNDQILPFWENYYSGGSSSLRGFKSNSVGPRSFYLYRGSEPCAPDPSGDGCSLPGDPNSIQVSSGRSIGGNALA TASMELIVPTPFLDEAYTNSVRTSFFVDAGNVWDTEFDYNAYQTLPADEFAKLQDYSDPARLRASWGLSVQWLSPMGPMV FSLAWPIKEYEGDQTEIFSFNIGKTF >Mature_826_residues MRLNKLFASMLFVGASFSGTVLADTFQPFEVTDIQVEGLQRVALGAALLSLPVKVGDTVDQLRIQQAIKSLYASTNFENV SVSRDGGVLVVKVTERPTISAVTFDGNKDIKDEQLQESLDGSGVKVGESLDRTMLTGIEKGLQDFYYGVGKYGAKVEAQV INLPRNRVELKFKFTEGLAAEIRQINVVGNHEFTDAELIGMLELKDYVAWWDLFGERRYQKQKLQADLETIKTYYHNKGY IRFEVTSTQVAMTPDRKGLYITINVDEGEKYKVKEVNLTGDLMGREELMKSILPIKAGDMYNGGDVTFTEEMYSKYLGRF GYAYPEVKTYPEIDDKTKEVTLNINVKPGKRVYVRAINFTGNTVTKDEVMRRELRQMEGAWLNSAQVEQSKARLNRLGFF ETVDTETIQVPGTDDLVDVAVKVKEQPSGSFNAGVGYGTESGLSLQFGVQQNNFLGTGNQAGISLSTNKYSKNVNLSYTD PYWTKDGVSLGGSVYWSEFDANEANLERYKNSSYGVALNSGFPINEYNRINGGIGYRHNTISEISAYEQALRFYNIYRDD DPNADLSFDNFELSLGWYRSTLNRGTFPTDGSSQRLNGKMTSPGSDLQYFKTDFDTNFYFPINRSQSFVLLARGRLGYGN GYGQFNDNDQILPFWENYYSGGSSSLRGFKSNSVGPRSFYLYRGSEPCAPDPSGDGCSLPGDPNSIQVSSGRSIGGNALA TASMELIVPTPFLDEAYTNSVRTSFFVDAGNVWDTEFDYNAYQTLPADEFAKLQDYSDPARLRASWGLSVQWLSPMGPMV FSLAWPIKEYEGDQTEIFSFNIGKTF
Specific function: Involved in the assembly of outer membrane proteins. Does not play a direct role in the export of outer membrane lipids [H]
COG id: COG4775
COG function: function code M; Outer membrane protein/protective antigen OMA87
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surface antigen D15 family [H]
Homologues:
Organism=Escherichia coli, GI1786374, Length=831, Percent_Identity=50.9025270758123, Blast_Score=846, Evalue=0.0,
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000184 - InterPro: IPR016474 - InterPro: IPR010827 [H]
Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]
EC number: NA
Molecular weight: Translated: 92310; Mature: 92310
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLNKLFASMLFVGASFSGTVLADTFQPFEVTDIQVEGLQRVALGAALLSLPVKVGDTVD CCHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCHHH QLRIQQAIKSLYASTNFENVSVSRDGGVLVVKVTERPTISAVTFDGNKDIKDEQLQESLD HHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCHHHHHHHCC GSGVKVGESLDRTMLTGIEKGLQDFYYGVGKYGAKVEAQVINLPRNRVELKFKFTEGLAA CCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEECCCHHE EIRQINVVGNHEFTDAELIGMLELKDYVAWWDLFGERRYQKQKLQADLETIKTYYHNKGY EEEEEEEECCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE IRFEVTSTQVAMTPDRKGLYITINVDEGEKYKVKEVNLTGDLMGREELMKSILPIKAGDM EEEEEECEEEEECCCCCCEEEEEEECCCCEEEEEEEECCHHHCCHHHHHHHHCCCCCCCC YNGGDVTFTEEMYSKYLGRFGYAYPEVKTYPEIDDKTKEVTLNINVKPGKRVYVRAINFT CCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEECC GNTVTKDEVMRRELRQMEGAWLNSAQVEQSKARLNRLGFFETVDTETIQVPGTDDLVDVA CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEECCCCEEECCCCCCCEEEE VKVKEQPSGSFNAGVGYGTESGLSLQFGVQQNNFLGTGNQAGISLSTNKYSKNVNLSYTD EEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCEECCCCCCCEEEECCCCCCCCEEEECC PYWTKDGVSLGGSVYWSEFDANEANLERYKNSSYGVALNSGFPINEYNRINGGIGYRHNT CCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCH ISEISAYEQALRFYNIYRDDDPNADLSFDNFELSLGWYRSTLNRGTFPTDGSSQRLNGKM HHHHHHHHHHHHHHHEECCCCCCCCCEECCEEEEEHHHHHHHCCCCCCCCCCCCCCCCEE TSPGSDLQYFKTDFDTNFYFPINRSQSFVLLARGRLGYGNGYGQFNDNDQILPFWENYYS CCCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEECHHHHCC GGSSSLRGFKSNSVGPRSFYLYRGSEPCAPDPSGDGCSLPGDPNSIQVSSGRSIGGNALA CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEE TASMELIVPTPFLDEAYTNSVRTSFFVDAGNVWDTEFDYNAYQTLPADEFAKLQDYSDPA EEEEEEEECCCCCCHHHHCCCCEEEEEECCCEECCCCCCCCEECCCHHHHHHHHCCCCHH RLRASWGLSVQWLSPMGPMVFSLAWPIKEYEGDQTEIFSFNIGKTF HEEEECCCEEEECCCCCCCCEEEECCHHHCCCCCEEEEEEECCCCC >Mature Secondary Structure MRLNKLFASMLFVGASFSGTVLADTFQPFEVTDIQVEGLQRVALGAALLSLPVKVGDTVD CCHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCHHH QLRIQQAIKSLYASTNFENVSVSRDGGVLVVKVTERPTISAVTFDGNKDIKDEQLQESLD HHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCHHHHHHHCC GSGVKVGESLDRTMLTGIEKGLQDFYYGVGKYGAKVEAQVINLPRNRVELKFKFTEGLAA CCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEECCCHHE EIRQINVVGNHEFTDAELIGMLELKDYVAWWDLFGERRYQKQKLQADLETIKTYYHNKGY EEEEEEEECCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE IRFEVTSTQVAMTPDRKGLYITINVDEGEKYKVKEVNLTGDLMGREELMKSILPIKAGDM EEEEEECEEEEECCCCCCEEEEEEECCCCEEEEEEEECCHHHCCHHHHHHHHCCCCCCCC YNGGDVTFTEEMYSKYLGRFGYAYPEVKTYPEIDDKTKEVTLNINVKPGKRVYVRAINFT CCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEECC GNTVTKDEVMRRELRQMEGAWLNSAQVEQSKARLNRLGFFETVDTETIQVPGTDDLVDVA CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEECCCCEEECCCCCCCEEEE VKVKEQPSGSFNAGVGYGTESGLSLQFGVQQNNFLGTGNQAGISLSTNKYSKNVNLSYTD EEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCEECCCCCCCEEEECCCCCCCCEEEECC PYWTKDGVSLGGSVYWSEFDANEANLERYKNSSYGVALNSGFPINEYNRINGGIGYRHNT CCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCH ISEISAYEQALRFYNIYRDDDPNADLSFDNFELSLGWYRSTLNRGTFPTDGSSQRLNGKM HHHHHHHHHHHHHHHEECCCCCCCCCEECCEEEEEHHHHHHHCCCCCCCCCCCCCCCCEE TSPGSDLQYFKTDFDTNFYFPINRSQSFVLLARGRLGYGNGYGQFNDNDQILPFWENYYS CCCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCEEECHHHHCC GGSSSLRGFKSNSVGPRSFYLYRGSEPCAPDPSGDGCSLPGDPNSIQVSSGRSIGGNALA CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEE TASMELIVPTPFLDEAYTNSVRTSFFVDAGNVWDTEFDYNAYQTLPADEFAKLQDYSDPA EEEEEEEECCCCCCHHHHCCCCEEEEEECCCEECCCCCCCCEECCCHHHHHHHHCCCCHH RLRASWGLSVQWLSPMGPMVFSLAWPIKEYEGDQTEIFSFNIGKTF HEEEECCCEEEECCCCCCCCEEEECCHHHCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA