Click here to switch to the map view.

The map label for this gene is skp [H]

Identifier: 160874607

GI number: 160874607

Start: 1793654

End: 1794151

Strand: Direct

Name: skp [H]

Synonym: Sbal195_1490

Alternate gene names: 160874607

Gene position: 1793654-1794151 (Clockwise)

Preceding gene: 160874606

Following gene: 160874608

Centisome position: 33.54

GC content: 43.37

Gene sequence:

>498_bases
ATGGTAAATCGCGCGCTGATGACGTTAGTTTTGTTAGGCGCGCCGTTAATGGCACATGCTGAGAAAATTGCCGTAGTGGA
TATGGGCGCTGTGTTCGAACAGCTGCCACAACGTGAGCAGATCTCTCAATCTCTGAAGAAAGAGTTTGGCGATCGCATGG
CTGATGTCCAAAAAATGCAAGAAGAAATGCGCTCTCTAATGGAGAAGCAGCAACGTGACGGTGCGTTAATGAACGATGCA
CAAAAAACGGAACTGGTTCGTAAAATGGAATCGCTAAAATCTGAATATCAGTTAAAAGGCAAAGCATTGGATGAAGACTT
ACGTCGTCGCCAAGGTGAAGAGCAAAATAAACTGTTAGTTAAAGTGCAAAAAGCCATCAACACTATCGCTGAAAAAGACC
AATATGATTTGGTATTACAACGTGGTGCAGTCATTTATGTTAAGCCTAACGCTGACATCAGTGGCAAAGTGGTTGAAGCC
TTAAGCAAAGGCAAGTAA

Upstream 100 bases:

>100_bases
GAGATCTTCTCTTTCAATATTGGCAAAACTTTTTAAAAGGCATACACTCGGCAAGTTTTGCTGACTATAACAAGGTAACA
AGGAGTTTATTTTGAACAAG

Downstream 100 bases:

>100_bases
TAGATGAATAGTGTGACTTTAAAAGAGCTAGGCCTGTTACTAGACGGTGATATTCAAGGCGACGAAACGCTAATTATTAA
TAGTGTGGCGACCTTAGAAC

Product: outer membrane chaperone Skp

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MVNRALMTLVLLGAPLMAHAEKIAVVDMGAVFEQLPQREQISQSLKKEFGDRMADVQKMQEEMRSLMEKQQRDGALMNDA
QKTELVRKMESLKSEYQLKGKALDEDLRRRQGEEQNKLLVKVQKAINTIAEKDQYDLVLQRGAVIYVKPNADISGKVVEA
LSKGK

Sequences:

>Translated_165_residues
MVNRALMTLVLLGAPLMAHAEKIAVVDMGAVFEQLPQREQISQSLKKEFGDRMADVQKMQEEMRSLMEKQQRDGALMNDA
QKTELVRKMESLKSEYQLKGKALDEDLRRRQGEEQNKLLVKVQKAINTIAEKDQYDLVLQRGAVIYVKPNADISGKVVEA
LSKGK
>Mature_165_residues
MVNRALMTLVLLGAPLMAHAEKIAVVDMGAVFEQLPQREQISQSLKKEFGDRMADVQKMQEEMRSLMEKQQRDGALMNDA
QKTELVRKMESLKSEYQLKGKALDEDLRRRQGEEQNKLLVKVQKAINTIAEKDQYDLVLQRGAVIYVKPNADISGKVVEA
LSKGK

Specific function: Molecular chaperone that interacts specifically with outer membrane proteins, thus maintaining the solubility of early folding intermediates during passage through the periplasm [H]

COG id: COG2825

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the skp family [H]

Homologues:

Organism=Escherichia coli, GI1786375, Length=141, Percent_Identity=30.4964539007092, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: 580 Molecules/Cell In: Growth-Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005632 [H]

Pfam domain/function: PF03938 OmpH [H]

EC number: NA

Molecular weight: Translated: 18701; Mature: 18701

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNRALMTLVLLGAPLMAHAEKIAVVDMGAVFEQLPQREQISQSLKKEFGDRMADVQKMQ
CCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
EEMRSLMEKQQRDGALMNDAQKTELVRKMESLKSEYQLKGKALDEDLRRRQGEEQNKLLV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHH
KVQKAINTIAEKDQYDLVLQRGAVIYVKPNADISGKVVEALSKGK
HHHHHHHHHHCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MVNRALMTLVLLGAPLMAHAEKIAVVDMGAVFEQLPQREQISQSLKKEFGDRMADVQKMQ
CCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
EEMRSLMEKQQRDGALMNDAQKTELVRKMESLKSEYQLKGKALDEDLRRRQGEEQNKLLV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHH
KVQKAINTIAEKDQYDLVLQRGAVIYVKPNADISGKVVEALSKGK
HHHHHHHHHHCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14528314 [H]