| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is nagK [H]
Identifier: 160874551
GI number: 160874551
Start: 1719332
End: 1720174
Strand: Reverse
Name: nagK [H]
Synonym: Sbal195_1433
Alternate gene names: 160874551
Gene position: 1720174-1719332 (Counterclockwise)
Preceding gene: 160874552
Following gene: 160874550
Centisome position: 32.17
GC content: 48.87
Gene sequence:
>843_bases ATGAGCGTCCTATGTTTAGATCTTGGGGGAACTAAACTGATGTTGGCACAGGTGGAAGGTAAAACCTTACTCGACACTTG GCGGTATCCCGTTCCCGCCGATGGCAATTTCGAACAGTTATTCGATTTCCTCGTGACCTGTATCCACAGCCATCTCACGC CTGAAACCTATGGTATTTCCATCGGGATACCCGGCATGGTGGATATGCAAAGCGGCACTTTACTCGAAGTGCTCAACATC CCTGCGTTGACGGCAACGCAGTTAGCCCAGCAACTTAAAAATACCTTTGAAATGGATGTGGTTGTGAATAACGACGCTAA CCTCTTTGCCCTTGGCGAAGCTGTGCTCAATCGCAATCAAGACATGCTCGGGATTACCTTAGGCACAGGCGTGGGCGCTG GGGTGATTTTTAATGGTCAGTTGTATTCGGGTAAACATTGCGCCGCAGGTGAAATCGGCAGTTTGAGTTATCGCGATGGC ATAATTGAGCACTATTGCTCGGGGCAATACTTCACCACTCATCACCACATGAGTGGCGAGCATTTGTACCAAAAAGCCTG TGAAGGAGACAGCCAAGCGCTACAAGCCTTCGCCCATTTTGGTGAACACTTGGCGCACATGATCGCCCAAACCTTACTGG TATACGATCCCAAAGATATCATCCTTGGCGGCTCAGTCAGCCAAAGCTTTCCCTTCTTTATTGAAGCGCTTAATCAGAAA TTGCAAAGCTTAGTCTATGGCCCCCAACTGGCGGACTTGACGATTTCAGCCAGCCAACATCACAATGCGGCACTCATTGG CGCGGCACAATGGTTTTTACAACAAAAGGACTCAGTTAAGTGA
Upstream 100 bases:
>100_bases CCTTGATTAAAAACACCACCCTATTTTCAACAAAAACGGCATCAAAGGATGACGGTTCTAAGCAGATGGCAACAACCAAC ACGAGAGGCAACAAGCTATT
Downstream 100 bases:
>100_bases AAGGACTAATTAAAGGAAAAGGGAAGATAAAGTGGCAGGGGATTAAGACGGCCTTAATCAGCGGCGTCATGGCCGTGCTT CCCGCGATGCCAGTGCTTTC
Product: ROK family protein
Products: NA
Alternate protein names: GlcNAc kinase [H]
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MSVLCLDLGGTKLMLAQVEGKTLLDTWRYPVPADGNFEQLFDFLVTCIHSHLTPETYGISIGIPGMVDMQSGTLLEVLNI PALTATQLAQQLKNTFEMDVVVNNDANLFALGEAVLNRNQDMLGITLGTGVGAGVIFNGQLYSGKHCAAGEIGSLSYRDG IIEHYCSGQYFTTHHHMSGEHLYQKACEGDSQALQAFAHFGEHLAHMIAQTLLVYDPKDIILGGSVSQSFPFFIEALNQK LQSLVYGPQLADLTISASQHHNAALIGAAQWFLQQKDSVK
Sequences:
>Translated_280_residues MSVLCLDLGGTKLMLAQVEGKTLLDTWRYPVPADGNFEQLFDFLVTCIHSHLTPETYGISIGIPGMVDMQSGTLLEVLNI PALTATQLAQQLKNTFEMDVVVNNDANLFALGEAVLNRNQDMLGITLGTGVGAGVIFNGQLYSGKHCAAGEIGSLSYRDG IIEHYCSGQYFTTHHHMSGEHLYQKACEGDSQALQAFAHFGEHLAHMIAQTLLVYDPKDIILGGSVSQSFPFFIEALNQK LQSLVYGPQLADLTISASQHHNAALIGAAQWFLQQKDSVK >Mature_279_residues SVLCLDLGGTKLMLAQVEGKTLLDTWRYPVPADGNFEQLFDFLVTCIHSHLTPETYGISIGIPGMVDMQSGTLLEVLNIP ALTATQLAQQLKNTFEMDVVVNNDANLFALGEAVLNRNQDMLGITLGTGVGAGVIFNGQLYSGKHCAAGEIGSLSYRDGI IEHYCSGQYFTTHHHMSGEHLYQKACEGDSQALQAFAHFGEHLAHMIAQTLLVYDPKDIILGGSVSQSFPFFIEALNQKL QSLVYGPQLADLTISASQHHNAALIGAAQWFLQQKDSVK
Specific function: Catalyzes the phosphorylation of N-acetyl-D-glucosamine (GlcNAc) derived from cell-wall degradation, yielding GlcNAc-6-P [H]
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family. NagK subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787363, Length=307, Percent_Identity=29.3159609120521, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI87081733, Length=302, Percent_Identity=26.4900662251656, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI1790522, Length=259, Percent_Identity=28.957528957529, Blast_Score=79, Evalue=3e-16,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: =2.7.1.59 [H]
Molecular weight: Translated: 30441; Mature: 30310
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLCLDLGGTKLMLAQVEGKTLLDTWRYPVPADGNFEQLFDFLVTCIHSHLTPETYGIS CEEEEEECCCCEEEEEEECCCEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE IGIPGMVDMQSGTLLEVLNIPALTATQLAQQLKNTFEMDVVVNNDANLFALGEAVLNRNQ ECCCCEEECCCCCEEEECCCCCHHHHHHHHHHHHCEEEEEEECCCCCEEEECHHHHCCCC DMLGITLGTGVGAGVIFNGQLYSGKHCAAGEIGSLSYRDGIIEHYCSGQYFTTHHHMSGE CEEEEEECCCCCCCEEECCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCHH HLYQKACEGDSQALQAFAHFGEHLAHMIAQTLLVYDPKDIILGGSVSQSFPFFIEALNQK HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEECCCCCCCCHHHHHHHHHH LQSLVYGPQLADLTISASQHHNAALIGAAQWFLQQKDSVK HHHHHCCCCEEEEEEECCCCCCEEEHHHHHHHHHHCCCCC >Mature Secondary Structure SVLCLDLGGTKLMLAQVEGKTLLDTWRYPVPADGNFEQLFDFLVTCIHSHLTPETYGIS EEEEEECCCCEEEEEEECCCEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE IGIPGMVDMQSGTLLEVLNIPALTATQLAQQLKNTFEMDVVVNNDANLFALGEAVLNRNQ ECCCCEEECCCCCEEEECCCCCHHHHHHHHHHHHCEEEEEEECCCCCEEEECHHHHCCCC DMLGITLGTGVGAGVIFNGQLYSGKHCAAGEIGSLSYRDGIIEHYCSGQYFTTHHHMSGE CEEEEEECCCCCCCEEECCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCHH HLYQKACEGDSQALQAFAHFGEHLAHMIAQTLLVYDPKDIILGGSVSQSFPFFIEALNQK HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEECCCCCCCCHHHHHHHHHH LQSLVYGPQLADLTISASQHHNAALIGAAQWFLQQKDSVK HHHHHCCCCEEEEEEECCCCCCEEEHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA