| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is gluP [H]
Identifier: 160874552
GI number: 160874552
Start: 1720171
End: 1721469
Strand: Reverse
Name: gluP [H]
Synonym: Sbal195_1434
Alternate gene names: 160874552
Gene position: 1721469-1720171 (Counterclockwise)
Preceding gene: 160874554
Following gene: 160874551
Centisome position: 32.19
GC content: 49.04
Gene sequence:
>1299_bases ATGAAACACAAACTCATCATTCTGTTTGTCCTCTGCACTTTCTTTGTGATTTCCTTGATGACCAACAGTATGGGGCCGAT TTTCCCTGCGTTAATTGACAGTTATGCTATCGGCCTGACGTTGGCGGGGTTATTTCCCTTTGCGTTTTTTATCGCCTACG GCGTTACATCGATTCCTGCGGGGATTTTGGTGGACAAGTACGGTGAAAAGCGAGTGATCATCTTAGCCTTTAGCCTCGCG TTTATCGGCGCCGTTACTTTTGTGTGCCTCCCTTCTTTTAGCATCGCCATGTTTAGCCTGTTTTGTATCGGCACTGGCAT GAGCTTATTGCAGGTAGCAGTGAATCCCTTACTGCGCCAAGCCGCGGGGCCTGAGCACTTTGCCTTTTTCTCCGTACTGG CCCAACTCGCCTTTGGCGGCGCCGCAACCTTAGCGCCGCTGGTGTACCAGCATTTTGTCGCCTTAGATCAAGCCAGTGCA GCATCAGCCAACTATGTGCAACAGCTATTGCCCGAGAACATGAGTTGGCTCGCCATGTACTGGTTATTTGCCGTGGTCGC ACTCGCCATGGTGCTCTTTGCCAGCCTAGTGAAGATGCCCAAAGTGGATAAATTGGCAGATGAGTCGGCGGGTGCACTGG AGACCCATTTACGCCTTTTCAAAGATAAAACCGTTTTGAAATTCTTCTTCGCTATCGCCGCCTACGTCGCACTTGAACAA GGGCTTGCTAACAGTATCTCAGTCTTTTTGTCGCAATATCATGGCCTTGATACCTTAAGTGTCGGCGCCAATGTGGTTAG CGATTTCTGGTTTTACATGACGCTCGGCTGCCTACTCGGTTTGCTGCTACTTAAGCTTATCGACAGTCAGATCTTGCTGC TCAGTTTTTCCCTTAGTTCACTGGTTTGTTTTCTGGTGGCGATTTGGGGACCGAGCCAACTAGCATTAATTTGTTTCCCA TTGGTTGGCTTTTTCATTTCTATCATGTGGTCAGTGATCTTCTCGCTGGCGCTCAATTCTCGCGCCCAAGATCATGGATC ATTCGCTGGCATTCTCTGCACTGGCATTATCGGCGGCGCGTTTATCTCGCCGATCATTGGTGTTATCAGTGAGCTGTCCG GCGAGTTACGGTTCGGGATGTTAGTGCTGTTAATCCCTATGGCTTACATAGGTTATGTCGCGCTAACGGCTCGCCCCTTG ATTAAAAACACCACCCTATTTTCAACAAAAACGGCATCAAAGGATGACGGTTCTAAGCAGATGGCAACAACCAACACGAG AGGCAACAAGCTATTATGA
Upstream 100 bases:
>100_bases TGCATATGTGAGAAAAGTATCGACAGAGGCACTATTCGTATCACCGCCATAGCGAGCGTCAGTCCACAATGAATTTCACT TAATTCAATTGGCTAAGCAC
Downstream 100 bases:
>100_bases GCGTCCTATGTTTAGATCTTGGGGGAACTAAACTGATGTTGGCACAGGTGGAAGGTAAAACCTTACTCGACACTTGGCGG TATCCCGTTCCCGCCGATGG
Product: major facilitator transporter
Products: Proton [Cytoplasm]; L-fucose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MKHKLIILFVLCTFFVISLMTNSMGPIFPALIDSYAIGLTLAGLFPFAFFIAYGVTSIPAGILVDKYGEKRVIILAFSLA FIGAVTFVCLPSFSIAMFSLFCIGTGMSLLQVAVNPLLRQAAGPEHFAFFSVLAQLAFGGAATLAPLVYQHFVALDQASA ASANYVQQLLPENMSWLAMYWLFAVVALAMVLFASLVKMPKVDKLADESAGALETHLRLFKDKTVLKFFFAIAAYVALEQ GLANSISVFLSQYHGLDTLSVGANVVSDFWFYMTLGCLLGLLLLKLIDSQILLLSFSLSSLVCFLVAIWGPSQLALICFP LVGFFISIMWSVIFSLALNSRAQDHGSFAGILCTGIIGGAFISPIIGVISELSGELRFGMLVLLIPMAYIGYVALTARPL IKNTTLFSTKTASKDDGSKQMATTNTRGNKLL
Sequences:
>Translated_432_residues MKHKLIILFVLCTFFVISLMTNSMGPIFPALIDSYAIGLTLAGLFPFAFFIAYGVTSIPAGILVDKYGEKRVIILAFSLA FIGAVTFVCLPSFSIAMFSLFCIGTGMSLLQVAVNPLLRQAAGPEHFAFFSVLAQLAFGGAATLAPLVYQHFVALDQASA ASANYVQQLLPENMSWLAMYWLFAVVALAMVLFASLVKMPKVDKLADESAGALETHLRLFKDKTVLKFFFAIAAYVALEQ GLANSISVFLSQYHGLDTLSVGANVVSDFWFYMTLGCLLGLLLLKLIDSQILLLSFSLSSLVCFLVAIWGPSQLALICFP LVGFFISIMWSVIFSLALNSRAQDHGSFAGILCTGIIGGAFISPIIGVISELSGELRFGMLVLLIPMAYIGYVALTARPL IKNTTLFSTKTASKDDGSKQMATTNTRGNKLL >Mature_432_residues MKHKLIILFVLCTFFVISLMTNSMGPIFPALIDSYAIGLTLAGLFPFAFFIAYGVTSIPAGILVDKYGEKRVIILAFSLA FIGAVTFVCLPSFSIAMFSLFCIGTGMSLLQVAVNPLLRQAAGPEHFAFFSVLAQLAFGGAATLAPLVYQHFVALDQASA ASANYVQQLLPENMSWLAMYWLFAVVALAMVLFASLVKMPKVDKLADESAGALETHLRLFKDKTVLKFFFAIAAYVALEQ GLANSISVFLSQYHGLDTLSVGANVVSDFWFYMTLGCLLGLLLLKLIDSQILLLSFSLSSLVCFLVAIWGPSQLALICFP LVGFFISIMWSVIFSLALNSRAQDHGSFAGILCTGIIGGAFISPIIGVISELSGELRFGMLVLLIPMAYIGYVALTARPL IKNTTLFSTKTASKDDGSKQMATTNTRGNKLL
Specific function: Intake of glucose and galactose (Potential) [H]
COG id: COG0738
COG function: function code G; Fucose permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. FHS transporter (TC 2.A.1.7) family [H]
Homologues:
Organism=Escherichia coli, GI1789166, Length=403, Percent_Identity=24.317617866005, Blast_Score=91, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005964 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46651; Mature: 46651
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHKLIILFVLCTFFVISLMTNSMGPIFPALIDSYAIGLTLAGLFPFAFFIAYGVTSIPA CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GILVDKYGEKRVIILAFSLAFIGAVTFVCLPSFSIAMFSLFCIGTGMSLLQVAVNPLLRQ HHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH AAGPEHFAFFSVLAQLAFGGAATLAPLVYQHFVALDQASAASANYVQQLLPENMSWLAMY CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHH WLFAVVALAMVLFASLVKMPKVDKLADESAGALETHLRLFKDKTVLKFFFAIAAYVALEQ HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLANSISVFLSQYHGLDTLSVGANVVSDFWFYMTLGCLLGLLLLKLIDSQILLLSFSLSS HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LVCFLVAIWGPSQLALICFPLVGFFISIMWSVIFSLALNSRAQDHGSFAGILCTGIIGGA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHH FISPIIGVISELSGELRFGMLVLLIPMAYIGYVALTARPLIKNTTLFSTKTASKDDGSKQ HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCC MATTNTRGNKLL CEECCCCCCCCC >Mature Secondary Structure MKHKLIILFVLCTFFVISLMTNSMGPIFPALIDSYAIGLTLAGLFPFAFFIAYGVTSIPA CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GILVDKYGEKRVIILAFSLAFIGAVTFVCLPSFSIAMFSLFCIGTGMSLLQVAVNPLLRQ HHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH AAGPEHFAFFSVLAQLAFGGAATLAPLVYQHFVALDQASAASANYVQQLLPENMSWLAMY CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHH WLFAVVALAMVLFASLVKMPKVDKLADESAGALETHLRLFKDKTVLKFFFAIAAYVALEQ HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLANSISVFLSQYHGLDTLSVGANVVSDFWFYMTLGCLLGLLLLKLIDSQILLLSFSLSS HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LVCFLVAIWGPSQLALICFPLVGFFISIMWSVIFSLALNSRAQDHGSFAGILCTGIIGGA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHH FISPIIGVISELSGELRFGMLVLLIPMAYIGYVALTARPLIKNTTLFSTKTASKDDGSKQ HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCC MATTNTRGNKLL CEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-fucose [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-fucose [Periplasm] = Proton [Cytoplasm] + L-fucose [Cytoplasm] [C]
General reaction: Permease [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9168605 [H]