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The map label for this gene is smpA [H]

Identifier: 160874456

GI number: 160874456

Start: 1589259

End: 1589837

Strand: Reverse

Name: smpA [H]

Synonym: Sbal195_1337

Alternate gene names: 160874456

Gene position: 1589837-1589259 (Counterclockwise)

Preceding gene: 160874461

Following gene: 160874453

Centisome position: 29.73

GC content: 45.94

Gene sequence:

>579_bases
ATGACGGCAGCAAAGCCCGATTGCCCTTGTCATGAGGGGGAATGCTTGGGTATTATGGCCGCCAGATTTTCAGAAGTAGC
GCATACAATGATCAATAAAAAGCAAAGTCTTACCCTGCTGAGCGCTGTGGCGCTCTCTGTTTCGCTCAGTGCTTGTAGTG
TGTTCGATTGGTTGATTTATAAGCCCGACATCCCACAGGGTAACTACATGGAACCGCAACAAGTTGAAAAGTTGCGCATT
GACATGACCAAAGAACAAGCCGAATACATTCTCGGCCGTCCGGTTTTACGCGATAGTTTCGCCGACGATACTTGGTACTA
CGTCTATCACTACAAGAGTGGACGCGATGCCAGCATTACGCATAAAGAACTCATTTTGCACTTTACGGGAGATAAACTCA
CCGCAGTGAATGGCGATTATGAGCTAAGCAAAGAATTTGATACGCCGCTCGAGCAGAGCAGTTTACCTACGGGTAATAAA
ACTGAGCTAGTGCCACAAATTCCTGCACAGCGTCCAGATGCCAAACCTTTAGTAAAAGAAAACCAAACAGAAGCGCAAGT
TCAAAAACCAATTAAGTAA

Upstream 100 bases:

>100_bases
AGCACACCCACAGCAGCCAAGTGACTTACAGTAATAAATATCCTTAAAGATTGAGAACTAAAGCCAACATCGCGGGTCGA
AAAGTCACACAATTCGATCT

Downstream 100 bases:

>100_bases
TATCCTAAACTTTGCTTATGCTCTTCTAAGTCAATCAAATACAAAAAAGCGCCCAAGGGCGCTTTTTCATTGAGCAATGA
TGTCAAACTGACGTCAGTCG

Product: SmpA/OmlA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MTAAKPDCPCHEGECLGIMAARFSEVAHTMINKKQSLTLLSAVALSVSLSACSVFDWLIYKPDIPQGNYMEPQQVEKLRI
DMTKEQAEYILGRPVLRDSFADDTWYYVYHYKSGRDASITHKELILHFTGDKLTAVNGDYELSKEFDTPLEQSSLPTGNK
TELVPQIPAQRPDAKPLVKENQTEAQVQKPIK

Sequences:

>Translated_192_residues
MTAAKPDCPCHEGECLGIMAARFSEVAHTMINKKQSLTLLSAVALSVSLSACSVFDWLIYKPDIPQGNYMEPQQVEKLRI
DMTKEQAEYILGRPVLRDSFADDTWYYVYHYKSGRDASITHKELILHFTGDKLTAVNGDYELSKEFDTPLEQSSLPTGNK
TELVPQIPAQRPDAKPLVKENQTEAQVQKPIK
>Mature_191_residues
TAAKPDCPCHEGECLGIMAARFSEVAHTMINKKQSLTLLSAVALSVSLSACSVFDWLIYKPDIPQGNYMEPQQVEKLRID
MTKEQAEYILGRPVLRDSFADDTWYYVYHYKSGRDASITHKELILHFTGDKLTAVNGDYELSKEFDTPLEQSSLPTGNKT
ELVPQIPAQRPDAKPLVKENQTEAQVQKPIK

Specific function: Unknown

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smpA/omlA family [H]

Homologues:

Organism=Escherichia coli, GI87082138, Length=92, Percent_Identity=40.2173913043478, Blast_Score=85, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007450 [H]

Pfam domain/function: PF04355 SmpA_OmlA [H]

EC number: NA

Molecular weight: Translated: 21604; Mature: 21473

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAAKPDCPCHEGECLGIMAARFSEVAHTMINKKQSLTLLSAVALSVSLSACSVFDWLIY
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEE
KPDIPQGNYMEPQQVEKLRIDMTKEQAEYILGRPVLRDSFADDTWYYVYHYKSGRDASIT
CCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCHHHHCCCCCEEEEEEEECCCCCCCCC
HKELILHFTGDKLTAVNGDYELSKEFDTPLEQSSLPTGNKTELVPQIPAQRPDAKPLVKE
CEEEEEEECCCEEEEECCCCEECHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NQTEAQVQKPIK
CCCHHHHHCCCC
>Mature Secondary Structure 
TAAKPDCPCHEGECLGIMAARFSEVAHTMINKKQSLTLLSAVALSVSLSACSVFDWLIY
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEE
KPDIPQGNYMEPQQVEKLRIDMTKEQAEYILGRPVLRDSFADDTWYYVYHYKSGRDASIT
CCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCHHHHCCCCCEEEEEEEECCCCCCCCC
HKELILHFTGDKLTAVNGDYELSKEFDTPLEQSSLPTGNKTELVPQIPAQRPDAKPLVKE
CEEEEEEECCCEEEEECCCCEECHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NQTEAQVQKPIK
CCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA