Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160874330
Identifier: 160874330
GI number: 160874330
Start: 1437773
End: 1438495
Strand: Reverse
Name: 160874330
Synonym: Sbal195_1211
Alternate gene names: NA
Gene position: 1438495-1437773 (Counterclockwise)
Preceding gene: 160874331
Following gene: 160874329
Centisome position: 26.9
GC content: 43.57
Gene sequence:
>723_bases ATGAACCAACACGTATTACTTAACAGCGTAGATCATAAAGATATTAAAATTATCACTGAGCGTAGTGCTAAGTACGGCGA TAATGTCTGGTTCAGTGTCACTTTTCCGGCGGAGTTTCGCAGCGTACAGGCGCATTATCCGATTTTTTTCCAAAAGGATC AGTCCACAGGCCAGTTCTTTGCAGTGGCGCTTTATGGTTTTCAAAATAATGAGAATCTGTTTTTAAATAATGGCACTTGG CAGGCTTCTTATATCCCTCTCACCCTACGTCGTCAGCCGTTTCTTATTGGTCAGCAAAGCGTGCGTGAAGACGGTGTCGA GCGCAAACAAAGGGTCATACATATCGATATGGCGAGCCCAAAAGTCAGCACAACCGAAGGCGAAGCTTTGTTCCATCCCT ATGGTGGGAATACGCAATATCTGGATGACATTGGGGATATGTTAGAAGGTATCCACCACGGGCTTATCGACAGTAAGCAC TTTATCGATTTGCTTATCGAACATAAGTTGCTGGAATCCTTTACCTTAGATATCAAGCTCGACAATGGCCACCAACATCA AATGATGGGTTTCTATACTATTAATGAAGAAACGCTAGCGGCCCTTTCGGCAGAAGTGCTCGCTCAATTACATGCTAAAA GTTATCTAGAGGCGATTTACATGACCTTGGCCTCACAGGCAAGAATACGTGACTTGCTTAACCTTAAAAATGCGCAAGGT TAA
Upstream 100 bases:
>100_bases CTATTAAACAAGGTCAGGCAATTTGGTTTCCCTAAGATTTAGCACAAATAACAAGAATAACTCGCGGCAGTGAGAACCAA CAAAGGACAAAGGTAACCCT
Downstream 100 bases:
>100_bases CTAGGTCGCAGCTATGAGTCTTGATGTGATTAAACCTAAAACTAATGTCGTCAAACACCTTGAAAACTGCTCAACCGAGG AGATGATCGCGCTGATTAAA
Product: SapC family protein
Products: NA
Alternate protein names: SapC-Related Protein; SapC Related Protein; SapC-Like Protein; SapC Protein; SapC Superfamily Protein; SapC Superfamily; Sapc Family Protein
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MNQHVLLNSVDHKDIKIITERSAKYGDNVWFSVTFPAEFRSVQAHYPIFFQKDQSTGQFFAVALYGFQNNENLFLNNGTW QASYIPLTLRRQPFLIGQQSVREDGVERKQRVIHIDMASPKVSTTEGEALFHPYGGNTQYLDDIGDMLEGIHHGLIDSKH FIDLLIEHKLLESFTLDIKLDNGHQHQMMGFYTINEETLAALSAEVLAQLHAKSYLEAIYMTLASQARIRDLLNLKNAQG
Sequences:
>Translated_240_residues MNQHVLLNSVDHKDIKIITERSAKYGDNVWFSVTFPAEFRSVQAHYPIFFQKDQSTGQFFAVALYGFQNNENLFLNNGTW QASYIPLTLRRQPFLIGQQSVREDGVERKQRVIHIDMASPKVSTTEGEALFHPYGGNTQYLDDIGDMLEGIHHGLIDSKH FIDLLIEHKLLESFTLDIKLDNGHQHQMMGFYTINEETLAALSAEVLAQLHAKSYLEAIYMTLASQARIRDLLNLKNAQG >Mature_240_residues MNQHVLLNSVDHKDIKIITERSAKYGDNVWFSVTFPAEFRSVQAHYPIFFQKDQSTGQFFAVALYGFQNNENLFLNNGTW QASYIPLTLRRQPFLIGQQSVREDGVERKQRVIHIDMASPKVSTTEGEALFHPYGGNTQYLDDIGDMLEGIHHGLIDSKH FIDLLIEHKLLESFTLDIKLDNGHQHQMMGFYTINEETLAALSAEVLAQLHAKSYLEAIYMTLASQARIRDLLNLKNAQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27397; Mature: 27397
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQHVLLNSVDHKDIKIITERSAKYGDNVWFSVTFPAEFRSVQAHYPIFFQKDQSTGQFF CCCEEEEECCCCCCEEEEEECCCCCCCCEEEEEECCHHHCCEECCCCEEEEECCCCCCEE AVALYGFQNNENLFLNNGTWQASYIPLTLRRQPFLIGQQSVREDGVERKQRVIHIDMASP EEEEEEEECCCEEEEECCEEEEEEEEEEECCCCEEECHHHHHHHHHHHHHEEEEEEECCC KVSTTEGEALFHPYGGNTQYLDDIGDMLEGIHHGLIDSKHFIDLLIEHKLLESFTLDIKL CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEEEE DNGHQHQMMGFYTINEETLAALSAEVLAQLHAKSYLEAIYMTLASQARIRDLLNLKNAQG CCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNQHVLLNSVDHKDIKIITERSAKYGDNVWFSVTFPAEFRSVQAHYPIFFQKDQSTGQFF CCCEEEEECCCCCCEEEEEECCCCCCCCEEEEEECCHHHCCEECCCCEEEEECCCCCCEE AVALYGFQNNENLFLNNGTWQASYIPLTLRRQPFLIGQQSVREDGVERKQRVIHIDMASP EEEEEEEECCCEEEEECCEEEEEEEEEEECCCCEEECHHHHHHHHHHHHHEEEEEEECCC KVSTTEGEALFHPYGGNTQYLDDIGDMLEGIHHGLIDSKHFIDLLIEHKLLESFTLDIKL CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEEEE DNGHQHQMMGFYTINEETLAALSAEVLAQLHAKSYLEAIYMTLASQARIRDLLNLKNAQG CCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA