Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160874331
Identifier: 160874331
GI number: 160874331
Start: 1438554
End: 1440185
Strand: Reverse
Name: 160874331
Synonym: Sbal195_1212
Alternate gene names: NA
Gene position: 1440185-1438554 (Counterclockwise)
Preceding gene: 160874332
Following gene: 160874330
Centisome position: 26.93
GC content: 48.35
Gene sequence:
>1632_bases ATGCAGCAAGCAACTCACACAGCCATTAATAACATTGTCATTGTCGGTGGCGGCACAGCCGGTTGGTTAACCGCTGCTCT TTTGGCCGCCGAGCATAATGTCGATAAAGGCCAGCTTGCGCACTCGCCTAAACTCAATATCACATTAATAGAATCCCCCG ATGTGGCCACGATCGGCGTCGGCGAAGGCACTTGGCCTTCGATGCGTAACACCTTAGATAAAATCGGCATCAGCGAAACC GAATTTATTCGCCAATGCGACGCGAGCTTCAAACAGGGCTCACGCTTTATTCACTGGCAGCACGATGATACTGAACATAC TAAACCATTCGATTCTAACCAATATTTACATCCCTTTAGCCTACCCCATGGCCATCAAGAGTTAGACTTGTGTCCCTTTT GGTTGCCTCACAGTGACAAGGTCAGTTTTGCTCAGGCGGTATCCAACCAAGATGCGCTGACTCAGTTAGGGCTAGCGCCT AAAACCATTGCGACACCGGAATATCATTTTCAAAACAATTACGGCTATCACTTAGATGCGGGTAAATTTAGCCAACTGTT AATGCTGCATTGCACCGAAAAACTGGGGGTCAAGTACATTAGAGATCATGTCACTCAGGTTCACAGTCATGCCAATGGCG ATATAGAAAGCCTTGCGACCAAAAAACATGGCGTGATCTTAGGTGATATGTTTGTCGATTGTTCCGGCACTAAATCATTG CTGCTGGGCGAGCATTTTAACGTGCCCTTCCACAGCCAAAAAGCTGTGCTGTTTAACGACAGCGCCTTAGCAATACAAGT CCCCTATGCCGAAGAAAACAGCCCTATCGCCTCATGCACACTCTCAACGGCGCAGCCCAATGGCTGGATCTGGGATATAG GTTTACCGACTCGCAAAGGCATGGGTTATGTCTATTCATCAGCCCATTGTAGCGATGACGAGGCTGAACAAACCTTAAGA GCCTATTTAACCAATGACACATCAACTAATCCTCAATCGGCATCCAGCAACGCGCTTGATAGTCGTAAACAAGAATGCCG AAAGCTAAATATCAACCCCGGCTATCATGCAAAATGCTGGCAAAACAACTGTATTGCCATCGGCATGGCGGCGGGCTTTA TTGAGCCGCTAGAAGCATCGGCATTAGCCTTAGTGGAATGGACGGCGAATACCTTAGCCACGCAACTGCCAACGCATCGC GGCGTAATGGACACGATTGCCCAGCGAGTGAATGAACGCTACGAGCGCCACTGGCAGCAAATCATCGACTTTTTGAAACT GCATTATGTCGTGAGTCGACGCGAAGTGGATGGCTACTGGCGCGATCACCGGGAGGCCGCATCCATTCCAGAAAGATTAC AGCAGCAACTCGACTTATGGCGTTATCAAGCGCCAAGCAGTCACGATATTAGCTACAAAGAACCCTTATTTCCGGCGGCG AGTTTCCAATATGTGCTTTATGGTATGGGCTTTAATACTACCCTGCCCACCCATATCAAGCCGTCGCAACAGCAAGTTGC CCAAAGACTTTTTAGCGAGAATCAACAAAAGGTCCATGCATTGAGCCAAAGCCTTCCGAGCAATCGCGACCTATTAAACA AGGTCAGGCAATTTGGTTTCCCTAAGATTTAG
Upstream 100 bases:
>100_bases AGTAAAACTATTCAATGCTAGCGCAAGCGTTAACCGCGTTAGTGGTAACGAAAAACATAAAAGCCTTTTATAAACAACAA TAAAAGATTAGGCACTCGAT
Downstream 100 bases:
>100_bases CACAAATAACAAGAATAACTCGCGGCAGTGAGAACCAACAAAGGACAAAGGTAACCCTATGAACCAACACGTATTACTTA ACAGCGTAGATCATAAAGAT
Product: tryptophan halogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 543; Mature: 543
Protein sequence:
>543_residues MQQATHTAINNIVIVGGGTAGWLTAALLAAEHNVDKGQLAHSPKLNITLIESPDVATIGVGEGTWPSMRNTLDKIGISET EFIRQCDASFKQGSRFIHWQHDDTEHTKPFDSNQYLHPFSLPHGHQELDLCPFWLPHSDKVSFAQAVSNQDALTQLGLAP KTIATPEYHFQNNYGYHLDAGKFSQLLMLHCTEKLGVKYIRDHVTQVHSHANGDIESLATKKHGVILGDMFVDCSGTKSL LLGEHFNVPFHSQKAVLFNDSALAIQVPYAEENSPIASCTLSTAQPNGWIWDIGLPTRKGMGYVYSSAHCSDDEAEQTLR AYLTNDTSTNPQSASSNALDSRKQECRKLNINPGYHAKCWQNNCIAIGMAAGFIEPLEASALALVEWTANTLATQLPTHR GVMDTIAQRVNERYERHWQQIIDFLKLHYVVSRREVDGYWRDHREAASIPERLQQQLDLWRYQAPSSHDISYKEPLFPAA SFQYVLYGMGFNTTLPTHIKPSQQQVAQRLFSENQQKVHALSQSLPSNRDLLNKVRQFGFPKI
Sequences:
>Translated_543_residues MQQATHTAINNIVIVGGGTAGWLTAALLAAEHNVDKGQLAHSPKLNITLIESPDVATIGVGEGTWPSMRNTLDKIGISET EFIRQCDASFKQGSRFIHWQHDDTEHTKPFDSNQYLHPFSLPHGHQELDLCPFWLPHSDKVSFAQAVSNQDALTQLGLAP KTIATPEYHFQNNYGYHLDAGKFSQLLMLHCTEKLGVKYIRDHVTQVHSHANGDIESLATKKHGVILGDMFVDCSGTKSL LLGEHFNVPFHSQKAVLFNDSALAIQVPYAEENSPIASCTLSTAQPNGWIWDIGLPTRKGMGYVYSSAHCSDDEAEQTLR AYLTNDTSTNPQSASSNALDSRKQECRKLNINPGYHAKCWQNNCIAIGMAAGFIEPLEASALALVEWTANTLATQLPTHR GVMDTIAQRVNERYERHWQQIIDFLKLHYVVSRREVDGYWRDHREAASIPERLQQQLDLWRYQAPSSHDISYKEPLFPAA SFQYVLYGMGFNTTLPTHIKPSQQQVAQRLFSENQQKVHALSQSLPSNRDLLNKVRQFGFPKI >Mature_543_residues MQQATHTAINNIVIVGGGTAGWLTAALLAAEHNVDKGQLAHSPKLNITLIESPDVATIGVGEGTWPSMRNTLDKIGISET EFIRQCDASFKQGSRFIHWQHDDTEHTKPFDSNQYLHPFSLPHGHQELDLCPFWLPHSDKVSFAQAVSNQDALTQLGLAP KTIATPEYHFQNNYGYHLDAGKFSQLLMLHCTEKLGVKYIRDHVTQVHSHANGDIESLATKKHGVILGDMFVDCSGTKSL LLGEHFNVPFHSQKAVLFNDSALAIQVPYAEENSPIASCTLSTAQPNGWIWDIGLPTRKGMGYVYSSAHCSDDEAEQTLR AYLTNDTSTNPQSASSNALDSRKQECRKLNINPGYHAKCWQNNCIAIGMAAGFIEPLEASALALVEWTANTLATQLPTHR GVMDTIAQRVNERYERHWQQIIDFLKLHYVVSRREVDGYWRDHREAASIPERLQQQLDLWRYQAPSSHDISYKEPLFPAA SFQYVLYGMGFNTTLPTHIKPSQQQVAQRLFSENQQKVHALSQSLPSNRDLLNKVRQFGFPKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006905 [H]
Pfam domain/function: PF04820 Trp_halogenase [H]
EC number: NA
Molecular weight: Translated: 60889; Mature: 60889
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQATHTAINNIVIVGGGTAGWLTAALLAAEHNVDKGQLAHSPKLNITLIESPDVATIGV CCCHHHHHHCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEC GEGTWPSMRNTLDKIGISETEFIRQCDASFKQGSRFIHWQHDDTEHTKPFDSNQYLHPFS CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCC LPHGHQELDLCPFWLPHSDKVSFAQAVSNQDALTQLGLAPKTIATPEYHFQNNYGYHLDA CCCCCCCCCCCEEECCCCCCHHHHHHHCCHHHHHHHCCCCCCCCCCCCEECCCCCEEECC GKFSQLLMLHCTEKLGVKYIRDHVTQVHSHANGDIESLATKKHGVILGDMFVDCSGTKSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEEEEEECCCCCCE LLGEHFNVPFHSQKAVLFNDSALAIQVPYAEENSPIASCTLSTAQPNGWIWDIGLPTRKG EECCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCEEEEEEECCCCCCEEEECCCCCCCC MGYVYSSAHCSDDEAEQTLRAYLTNDTSTNPQSASSNALDSRKQECRKLNINPGYHAKCW CCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCEEC QNNCIAIGMAAGFIEPLEASALALVEWTANTLATQLPTHRGVMDTIAQRVNERYERHWQQ CCCCEEEEEHHCCCCHHCCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH IIDFLKLHYVVSRREVDGYWRDHREAASIPERLQQQLDLWRYQAPSSHDISYKEPLFPAA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC SFQYVLYGMGFNTTLPTHIKPSQQQVAQRLFSENQQKVHALSQSLPSNRDLLNKVRQFGF CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCC PKI CCC >Mature Secondary Structure MQQATHTAINNIVIVGGGTAGWLTAALLAAEHNVDKGQLAHSPKLNITLIESPDVATIGV CCCHHHHHHCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEC GEGTWPSMRNTLDKIGISETEFIRQCDASFKQGSRFIHWQHDDTEHTKPFDSNQYLHPFS CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCC LPHGHQELDLCPFWLPHSDKVSFAQAVSNQDALTQLGLAPKTIATPEYHFQNNYGYHLDA CCCCCCCCCCCEEECCCCCCHHHHHHHCCHHHHHHHCCCCCCCCCCCCEECCCCCEEECC GKFSQLLMLHCTEKLGVKYIRDHVTQVHSHANGDIESLATKKHGVILGDMFVDCSGTKSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEEEEEECCCCCCE LLGEHFNVPFHSQKAVLFNDSALAIQVPYAEENSPIASCTLSTAQPNGWIWDIGLPTRKG EECCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCEEEEEEECCCCCCEEEECCCCCCCC MGYVYSSAHCSDDEAEQTLRAYLTNDTSTNPQSASSNALDSRKQECRKLNINPGYHAKCW CCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCEEC QNNCIAIGMAAGFIEPLEASALALVEWTANTLATQLPTHRGVMDTIAQRVNERYERHWQQ CCCCEEEEEHHCCCCHHCCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH IIDFLKLHYVVSRREVDGYWRDHREAASIPERLQQQLDLWRYQAPSSHDISYKEPLFPAA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC SFQYVLYGMGFNTTLPTHIKPSQQQVAQRLFSENQQKVHALSQSLPSNRDLLNKVRQFGF CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCC PKI CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]