Click here to switch to the map view.

The map label for this gene is dtpB [H]

Identifier: 160874326

GI number: 160874326

Start: 1432630

End: 1434183

Strand: Reverse

Name: dtpB [H]

Synonym: Sbal195_1207

Alternate gene names: 160874326

Gene position: 1434183-1432630 (Counterclockwise)

Preceding gene: 160874327

Following gene: 160874325

Centisome position: 26.82

GC content: 48.71

Gene sequence:

>1554_bases
ATGACTATTGGGACTGCTCCGGTAAGTAAAACACATTCATTTATGACTGTGTCTCTTATCGAATTATGGGAACGCTTTGG
TTATTACGGCATGCAAGCGCTGATTGTGTACTTTATGGTGCAGCGCCTTGGCTTTGATGACTCACGTGCAAACTTAGTAT
GGAGTGCCTGTGCGGCGCTCATTTATGTATCACCGGCGATTGGTGGTTGGGTTGGGGATAAGATCCTCGGCACTAAACGC
ACAATGCTGCTCGGCGCGGGGATTTTGTCTCTGGGTTATGCGCTGATGGCCGTACCCACTGAAAATACGTGGTTTATGTT
TTCAGCGCTCGGCGTGATTGTGGTCGGTAACGGCCTGTTCAAACCCAATGCGGGTAACTTAGTTCGTAAAATTTACGAAG
GTGACGATTCTAAAATCGACAGTGCGTTTACCATCTATTATATGGCGGTCAACGTCGGCTCAACCTTCTCTATGTTGCTG
ACGCCTTGGATTAAAGATTATGTCAACGCCCAGTATGGCAACGAGTTTGGCTGGCATGCCGCCTTTGCCGTGTGTTGTGT
CGGCATATTGGTGGGTTTAGGCAACTATGCACTTATGCGTAAGAGTTTAGTCCATTACGGTTCTGAGCCTGATACTCGCC
CAGTGAACAAGAAAAGCCTAGCGATAGTATTAGCTCTGGCCGCGTTGTCAGTAGTCGCTTCGGCCATTATTCTTGAATAT
GAAGCGGTTGCCCGTGTCTTTGTTTACGCCGCTGGCGTAGCGGTATTGGCCATTTTCTTCCACTTGATCCGCACCAGCGA
AACCAGTGAACGAGCGGGACTGATTGCGGCGCTGATCCTCACAGTGCAAACCGTGTTCTTCTTTATCTTCTATCAGCAAA
TGTCGACGTCATTGGCGCTGTTTGCCCTGCGTAACGTGGACTGGGATTTCCAAATCTTTGGTACCCATTTGTGGACTTGG
TCACCGGCTCAGTTCCAAGCATTGAATCCATTATGGATTATGGTGTTAAGTCCAATCTTGGCTTGGAGTTATTCGTGGGC
AGGTCGTAATGATAAAGACTTCTCTATTGCGGCGAAATTTGCCCTCGGTTTTGCCGTCGTCGCTATCGGCTTCTTTATCT
ATGGCTTTGCCGGACAATTTGCCGTCAACGGTAAAACTTCTTCATGGATCATGATCTGGGGCTATGCCTCTTACTCTTTA
GGCGAATTGCTGGTGAGTGGTCTTGGTCTTGCCATGATTGCCCGCTACGTGCCTGCGCGTATGGGCGGCTTTATGATGGG
CGCCTATTTCGTCGCCTCAGGTATTTCACAGTATCTGGGCGGTGTGGTCGCTAACTTCGCCAGTGTGCCGAAAGATTTAG
TCGATCCACTGCAAACCTTACCCGTATACACCAGTCTATTTAATAAGTTGGGTATCGCGGCTGTGGTCTGTACCTTTATC
GCCCTTGCGGTATTACCGCTAATGCGTCGCCTGACTGAGACTCACCATTCACATAATAATACTGAGAATGAAAGTGCTGC
GGCATCGCTACGTGATGTAAAAGCCGAGCAATAA

Upstream 100 bases:

>100_bases
ACAAAGTCTGTTTTGCCAGTCTCTGCCATTGGTTTGCTTGGGTTATCGCCTTATACTTTTGAGCTCAAATATTAAAACAA
CAATGTTGGAAGCAAGCGAT

Downstream 100 bases:

>100_bases
TGCGCGACTGACAATAGCGATTTATCTATTGCATAACATCAATTGCCGATAACCCTGCTATCGGCAGTTTTTTATCACTT
CACTTAGTTATACCCTTGTG

Product: amino acid/peptide transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 516

Protein sequence:

>517_residues
MTIGTAPVSKTHSFMTVSLIELWERFGYYGMQALIVYFMVQRLGFDDSRANLVWSACAALIYVSPAIGGWVGDKILGTKR
TMLLGAGILSLGYALMAVPTENTWFMFSALGVIVVGNGLFKPNAGNLVRKIYEGDDSKIDSAFTIYYMAVNVGSTFSMLL
TPWIKDYVNAQYGNEFGWHAAFAVCCVGILVGLGNYALMRKSLVHYGSEPDTRPVNKKSLAIVLALAALSVVASAIILEY
EAVARVFVYAAGVAVLAIFFHLIRTSETSERAGLIAALILTVQTVFFFIFYQQMSTSLALFALRNVDWDFQIFGTHLWTW
SPAQFQALNPLWIMVLSPILAWSYSWAGRNDKDFSIAAKFALGFAVVAIGFFIYGFAGQFAVNGKTSSWIMIWGYASYSL
GELLVSGLGLAMIARYVPARMGGFMMGAYFVASGISQYLGGVVANFASVPKDLVDPLQTLPVYTSLFNKLGIAAVVCTFI
ALAVLPLMRRLTETHHSHNNTENESAAASLRDVKAEQ

Sequences:

>Translated_517_residues
MTIGTAPVSKTHSFMTVSLIELWERFGYYGMQALIVYFMVQRLGFDDSRANLVWSACAALIYVSPAIGGWVGDKILGTKR
TMLLGAGILSLGYALMAVPTENTWFMFSALGVIVVGNGLFKPNAGNLVRKIYEGDDSKIDSAFTIYYMAVNVGSTFSMLL
TPWIKDYVNAQYGNEFGWHAAFAVCCVGILVGLGNYALMRKSLVHYGSEPDTRPVNKKSLAIVLALAALSVVASAIILEY
EAVARVFVYAAGVAVLAIFFHLIRTSETSERAGLIAALILTVQTVFFFIFYQQMSTSLALFALRNVDWDFQIFGTHLWTW
SPAQFQALNPLWIMVLSPILAWSYSWAGRNDKDFSIAAKFALGFAVVAIGFFIYGFAGQFAVNGKTSSWIMIWGYASYSL
GELLVSGLGLAMIARYVPARMGGFMMGAYFVASGISQYLGGVVANFASVPKDLVDPLQTLPVYTSLFNKLGIAAVVCTFI
ALAVLPLMRRLTETHHSHNNTENESAAASLRDVKAEQ
>Mature_516_residues
TIGTAPVSKTHSFMTVSLIELWERFGYYGMQALIVYFMVQRLGFDDSRANLVWSACAALIYVSPAIGGWVGDKILGTKRT
MLLGAGILSLGYALMAVPTENTWFMFSALGVIVVGNGLFKPNAGNLVRKIYEGDDSKIDSAFTIYYMAVNVGSTFSMLLT
PWIKDYVNAQYGNEFGWHAAFAVCCVGILVGLGNYALMRKSLVHYGSEPDTRPVNKKSLAIVLALAALSVVASAIILEYE
AVARVFVYAAGVAVLAIFFHLIRTSETSERAGLIAALILTVQTVFFFIFYQQMSTSLALFALRNVDWDFQIFGTHLWTWS
PAQFQALNPLWIMVLSPILAWSYSWAGRNDKDFSIAAKFALGFAVVAIGFFIYGFAGQFAVNGKTSSWIMIWGYASYSLG
ELLVSGLGLAMIARYVPARMGGFMMGAYFVASGISQYLGGVVANFASVPKDLVDPLQTLPVYTSLFNKLGIAAVVCTFIA
LAVLPLMRRLTETHHSHNNTENESAAASLRDVKAEQ

Specific function: Proton-dependent permease that transports di- and tripeptides [H]

COG id: COG3104

COG function: function code E; Dipeptide/tripeptide permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PTR2/POT transporter (TC 2.A.17) family. DtpB subfamily [H]

Homologues:

Organism=Homo sapiens, GI4827008, Length=405, Percent_Identity=21.9753086419753, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI226371746, Length=357, Percent_Identity=22.1288515406162, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI1789911, Length=493, Percent_Identity=38.7423935091278, Blast_Score=345, Evalue=3e-96,
Organism=Escherichia coli, GI1787922, Length=488, Percent_Identity=38.1147540983607, Blast_Score=342, Evalue=3e-95,
Organism=Escherichia coli, GI1790572, Length=508, Percent_Identity=28.740157480315, Blast_Score=194, Evalue=1e-50,
Organism=Escherichia coli, GI1786927, Length=492, Percent_Identity=28.2520325203252, Blast_Score=191, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI71987453, Length=372, Percent_Identity=25, Blast_Score=89, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17569141, Length=390, Percent_Identity=21.5384615384615, Blast_Score=69, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24639585, Length=199, Percent_Identity=27.6381909547739, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24639583, Length=195, Percent_Identity=28.2051282051282, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24639581, Length=196, Percent_Identity=28.0612244897959, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28571098, Length=336, Percent_Identity=25.297619047619, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28571102, Length=336, Percent_Identity=24.702380952381, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI28571100, Length=336, Percent_Identity=24.702380952381, Blast_Score=72, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016196
- InterPro:   IPR000109
- InterPro:   IPR005279
- InterPro:   IPR018456 [H]

Pfam domain/function: PF00854 PTR2 [H]

EC number: NA

Molecular weight: Translated: 56513; Mature: 56381

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIGTAPVSKTHSFMTVSLIELWERFGYYGMQALIVYFMVQRLGFDDSRANLVWSACAAL
CCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
IYVSPAIGGWVGDKILGTKRTMLLGAGILSLGYALMAVPTENTWFMFSALGVIVVGNGLF
HHHCCHHCCHHCCHHHCCHHHHHHHHHHHHHCHHHEEECCCCCCHHHHHHCHHEECCCCC
KPNAGNLVRKIYEGDDSKIDSAFTIYYMAVNVGSTFSMLLTPWIKDYVNAQYGNEFGWHA
CCCHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHH
AFAVCCVGILVGLGNYALMRKSLVHYGSEPDTRPVNKKSLAIVLALAALSVVASAIILEY
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EAVARVFVYAAGVAVLAIFFHLIRTSETSERAGLIAALILTVQTVFFFIFYQQMSTSLAL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FALRNVDWDFQIFGTHLWTWSPAQFQALNPLWIMVLSPILAWSYSWAGRNDKDFSIAAKF
HHHHCCCCCEEEEEEEEEECCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
ALGFAVVAIGFFIYGFAGQFAVNGKTSSWIMIWGYASYSLGELLVSGLGLAMIARYVPAR
HHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
MGGFMMGAYFVASGISQYLGGVVANFASVPKDLVDPLQTLPVYTSLFNKLGIAAVVCTFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAVLPLMRRLTETHHSHNNTENESAAASLRDVKAEQ
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
TIGTAPVSKTHSFMTVSLIELWERFGYYGMQALIVYFMVQRLGFDDSRANLVWSACAAL
CCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
IYVSPAIGGWVGDKILGTKRTMLLGAGILSLGYALMAVPTENTWFMFSALGVIVVGNGLF
HHHCCHHCCHHCCHHHCCHHHHHHHHHHHHHCHHHEEECCCCCCHHHHHHCHHEECCCCC
KPNAGNLVRKIYEGDDSKIDSAFTIYYMAVNVGSTFSMLLTPWIKDYVNAQYGNEFGWHA
CCCHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHH
AFAVCCVGILVGLGNYALMRKSLVHYGSEPDTRPVNKKSLAIVLALAALSVVASAIILEY
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EAVARVFVYAAGVAVLAIFFHLIRTSETSERAGLIAALILTVQTVFFFIFYQQMSTSLAL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FALRNVDWDFQIFGTHLWTWSPAQFQALNPLWIMVLSPILAWSYSWAGRNDKDFSIAAKF
HHHHCCCCCEEEEEEEEEECCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
ALGFAVVAIGFFIYGFAGQFAVNGKTSSWIMIWGYASYSLGELLVSGLGLAMIARYVPAR
HHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
MGGFMMGAYFVASGISQYLGGVVANFASVPKDLVDPLQTLPVYTSLFNKLGIAAVVCTFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAVLPLMRRLTETHHSHNNTENESAAASLRDVKAEQ
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA