Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160874327
Identifier: 160874327
GI number: 160874327
Start: 1434425
End: 1435198
Strand: Reverse
Name: 160874327
Synonym: Sbal195_1208
Alternate gene names: NA
Gene position: 1435198-1434425 (Counterclockwise)
Preceding gene: 160874328
Following gene: 160874326
Centisome position: 26.84
GC content: 47.16
Gene sequence:
>774_bases ATGCAAACCTTAGAACGCAACACGAATACGGCTAAGCCACAGGCAACTAAGCAACAGGCAACTAAGCAACAGCCAGTCAA GCTCACGCCTCAGCTAGTCTATCTTGGCAATGAAAAGACGCCCTTGATTATTATCGATGATGTTGCGGCGGATCTATTGC CAATACGCCAGTGCGCTTACACCCAAGCGCACTTTTCTGCCGATAACGGGTCTTTTTACCCCGGCGTGCGTGCCCCCTTG CCGCAGGCCTATGTCACCGATGTACTCAATCTTGTGTACCAACTGATTTATGATGTTTATCAAATCCCTTCGAGCTTAAG CATCAAATTACAGGCATTGTATTTCTCGCTGATCAGCACTCCCGCGTGTGAGCTTAAACCGCTGCAATGCCTGCCGCATT TTGATACTCCATCACCGCACTATTTCGCGCTACTGCACTATTTAAACGACGGTCCCCATGGCAATACGGCGTTTTTCCGC CATATTCCGACGGGCTTTGAGCGGATAAATGAAGAACGTATGCCAGACTACTTTAAGTCTGCTCAACCTTTCGTCGATGA CATTACTCGCCATCCTTCGGGCTATTGTGTTGAAAGCGACAGTCATTATGAGATTTATCATCAAGTAGAATATCGCCCGA ATCGTTTAGTGATTTATCCCGGTAATTTGCTGCATTCCACCTTAGTGAACCCACAAACCGATATTGATGCCAACCCAAGA ACAGGCCGGCTAACGAGCAATATTTTTATCGAGTTTAAACCCTCAGTCCGCTAA
Upstream 100 bases:
>100_bases TAAGGTCGAAAGCCTACCTGCCCACATCGATTTTATTCAGCACTATTGCCCAGCTGAGGTTCTAGCCAACACTAAACCTA TGGCAATGTGAGGTACAGGG
Downstream 100 bases:
>100_bases CGCAGCGATTCGCAAAGCGTTATATCACTGTTACTGATGCTGACGACTTTAGGTTTAGCTGGGTTTATTGACGTCCCCAA AATCGTAGTTAACACAGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MQTLERNTNTAKPQATKQQATKQQPVKLTPQLVYLGNEKTPLIIIDDVAADLLPIRQCAYTQAHFSADNGSFYPGVRAPL PQAYVTDVLNLVYQLIYDVYQIPSSLSIKLQALYFSLISTPACELKPLQCLPHFDTPSPHYFALLHYLNDGPHGNTAFFR HIPTGFERINEERMPDYFKSAQPFVDDITRHPSGYCVESDSHYEIYHQVEYRPNRLVIYPGNLLHSTLVNPQTDIDANPR TGRLTSNIFIEFKPSVR
Sequences:
>Translated_257_residues MQTLERNTNTAKPQATKQQATKQQPVKLTPQLVYLGNEKTPLIIIDDVAADLLPIRQCAYTQAHFSADNGSFYPGVRAPL PQAYVTDVLNLVYQLIYDVYQIPSSLSIKLQALYFSLISTPACELKPLQCLPHFDTPSPHYFALLHYLNDGPHGNTAFFR HIPTGFERINEERMPDYFKSAQPFVDDITRHPSGYCVESDSHYEIYHQVEYRPNRLVIYPGNLLHSTLVNPQTDIDANPR TGRLTSNIFIEFKPSVR >Mature_257_residues MQTLERNTNTAKPQATKQQATKQQPVKLTPQLVYLGNEKTPLIIIDDVAADLLPIRQCAYTQAHFSADNGSFYPGVRAPL PQAYVTDVLNLVYQLIYDVYQIPSSLSIKLQALYFSLISTPACELKPLQCLPHFDTPSPHYFALLHYLNDGPHGNTAFFR HIPTGFERINEERMPDYFKSAQPFVDDITRHPSGYCVESDSHYEIYHQVEYRPNRLVIYPGNLLHSTLVNPQTDIDANPR TGRLTSNIFIEFKPSVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29282; Mature: 29282
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTLERNTNTAKPQATKQQATKQQPVKLTPQLVYLGNEKTPLIIIDDVAADLLPIRQCAY CCCCCCCCCCCCCCHHHHHHHHCCCCEECCEEEEECCCCCCEEEECCHHHHHHHHHHHHH TQAHFSADNGSFYPGVRAPLPQAYVTDVLNLVYQLIYDVYQIPSSLSIKLQALYFSLIST HHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCC PACELKPLQCLPHFDTPSPHYFALLHYLNDGPHGNTAFFRHIPTGFERINEERMPDYFKS CCCCCCCHHCCCCCCCCCCHHHHHEEHHCCCCCCCCEEEECCCHHHHHHCHHCCCHHHHH AQPFVDDITRHPSGYCVESDSHYEIYHQVEYRPNRLVIYPGNLLHSTLVNPQTDIDANPR CCCHHHHHHCCCCCEEEECCCCEEEEEEEEECCCEEEEECCHHHHHHHCCCCCCCCCCCC TGRLTSNIFIEFKPSVR CCEEEEEEEEEECCCCC >Mature Secondary Structure MQTLERNTNTAKPQATKQQATKQQPVKLTPQLVYLGNEKTPLIIIDDVAADLLPIRQCAY CCCCCCCCCCCCCCHHHHHHHHCCCCEECCEEEEECCCCCCEEEECCHHHHHHHHHHHHH TQAHFSADNGSFYPGVRAPLPQAYVTDVLNLVYQLIYDVYQIPSSLSIKLQALYFSLIST HHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCC PACELKPLQCLPHFDTPSPHYFALLHYLNDGPHGNTAFFRHIPTGFERINEERMPDYFKS CCCCCCCHHCCCCCCCCCCHHHHHEEHHCCCCCCCCEEEECCCHHHHHHCHHCCCHHHHH AQPFVDDITRHPSGYCVESDSHYEIYHQVEYRPNRLVIYPGNLLHSTLVNPQTDIDANPR CCCHHHHHHCCCCCEEEECCCCEEEEEEEEECCCEEEEECCHHHHHHHCCCCCCCCCCCC TGRLTSNIFIEFKPSVR CCEEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA