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The map label for this gene is yfiO [C]

Identifier: 160874238

GI number: 160874238

Start: 1318555

End: 1319316

Strand: Reverse

Name: yfiO [C]

Synonym: Sbal195_1118

Alternate gene names: 160874238

Gene position: 1319316-1318555 (Counterclockwise)

Preceding gene: 160874242

Following gene: 160874237

Centisome position: 24.67

GC content: 42.78

Gene sequence:

>762_bases
ATGTATAAATTTTCCAAAGGCGTTACCTTAGTCCTATTTTCACTAGCGTTATCAGCCTGTAGCAGCAGCCCTGATGATAA
CGATATTGCCGCCAAAACGTCACCTGATGTGCTTTACACTCAGGCAAGAACCTCTATGGAACTTGGCAATTACTCTAAAG
CTGTCCGTTCTTTGGAGGCGTTAGACTCACGCTTCCCCTTCGGACCTCACAAAACTCAAGTCCAGTTAGACCTGATTTAT
GCTTACTACAAAATGGACGATGTCGCTTCGGGGATTGCGAACATAGACAGATTTATCCGTCTTAATCCTACCCACCCTGA
TATTGACTATGTGTTCTATATGCGCGGTTTAGTGAACATGCAAGCCGACAACTATTTGTTCCACGATATGCTTAATATCG
ACCGAACCGATCGTGACCCTAAAAATGCTCAAGATGCTTTCAAAGATTTTGATCGTCTTATCAAAACTTACCCTAACAGC
AAATATGCCGCCGATGCGCAAAAACGCATGTTAGCGTTGAAGAATCGCTTAGCAAGATATTCAATCCAAGTTGCCGAATA
TTATCTCAAGATGAATGCATGGAGCGCCGCAGCAATCCGAGCACAATCTGTAATGGAAACATATCCTGGCACCCCTTCAA
ATGAACGGGCATTAGAGATAATGATAGAAGCTTATGGCGAATTAGGTCAGAGCAAGCTGAAGCAAAACGTGCTCATGGTA
ATGCAAGCTAACTATCCAAACAATGAAATCTTATCAAACTAG

Upstream 100 bases:

>100_bases
GGTCAAAAAATGTGTGCTATCTGTTACAATCGGATGTTTTCTATTTTATAGTGAAATGGAAAAATTCTTAACTACAACTT
AAAAAGAATTGAATTCAAGT

Downstream 100 bases:

>100_bases
CCGAGAATGCCCCTTTAATAGGGGCATTTTTTTGCTTTGTTACCCAAGTTAACCCATCACTGGATATTGCTAAGTCCCCA
GCGTGGATAGTGGTTTGACT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MYKFSKGVTLVLFSLALSACSSSPDDNDIAAKTSPDVLYTQARTSMELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIY
AYYKMDDVASGIANIDRFIRLNPTHPDIDYVFYMRGLVNMQADNYLFHDMLNIDRTDRDPKNAQDAFKDFDRLIKTYPNS
KYAADAQKRMLALKNRLARYSIQVAEYYLKMNAWSAAAIRAQSVMETYPGTPSNERALEIMIEAYGELGQSKLKQNVLMV
MQANYPNNEILSN

Sequences:

>Translated_253_residues
MYKFSKGVTLVLFSLALSACSSSPDDNDIAAKTSPDVLYTQARTSMELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIY
AYYKMDDVASGIANIDRFIRLNPTHPDIDYVFYMRGLVNMQADNYLFHDMLNIDRTDRDPKNAQDAFKDFDRLIKTYPNS
KYAADAQKRMLALKNRLARYSIQVAEYYLKMNAWSAAAIRAQSVMETYPGTPSNERALEIMIEAYGELGQSKLKQNVLMV
MQANYPNNEILSN
>Mature_253_residues
MYKFSKGVTLVLFSLALSACSSSPDDNDIAAKTSPDVLYTQARTSMELGNYSKAVRSLEALDSRFPFGPHKTQVQLDLIY
AYYKMDDVASGIANIDRFIRLNPTHPDIDYVFYMRGLVNMQADNYLFHDMLNIDRTDRDPKNAQDAFKDFDRLIKTYPNS
KYAADAQKRMLALKNRLARYSIQVAEYYLKMNAWSAAAIRAQSVMETYPGTPSNERALEIMIEAYGELGQSKLKQNVLMV
MQANYPNNEILSN

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0169 (ComL) family [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=240, Percent_Identity=45.4166666666667, Blast_Score=223, Evalue=1e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28800; Mature: 28800

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKFSKGVTLVLFSLALSACSSSPDDNDIAAKTSPDVLYTQARTSMELGNYSKAVRSLEA
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH
LDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIANIDRFIRLNPTHPDIDYVFYMRGLVNM
HHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHC
QADNYLFHDMLNIDRTDRDPKNAQDAFKDFDRLIKTYPNSKYAADAQKRMLALKNRLARY
CCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
SIQVAEYYLKMNAWSAAAIRAQSVMETYPGTPSNERALEIMIEAYGELGQSKLKQNVLMV
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEE
MQANYPNNEILSN
EECCCCCCCCCCC
>Mature Secondary Structure
MYKFSKGVTLVLFSLALSACSSSPDDNDIAAKTSPDVLYTQARTSMELGNYSKAVRSLEA
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH
LDSRFPFGPHKTQVQLDLIYAYYKMDDVASGIANIDRFIRLNPTHPDIDYVFYMRGLVNM
HHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHC
QADNYLFHDMLNIDRTDRDPKNAQDAFKDFDRLIKTYPNSKYAADAQKRMLALKNRLARY
CCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
SIQVAEYYLKMNAWSAAAIRAQSVMETYPGTPSNERALEIMIEAYGELGQSKLKQNVLMV
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEE
MQANYPNNEILSN
EECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]