| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is cysU [H]
Identifier: 160874218
GI number: 160874218
Start: 1299866
End: 1300711
Strand: Reverse
Name: cysU [H]
Synonym: Sbal195_1098
Alternate gene names: 160874218
Gene position: 1300711-1299866 (Counterclockwise)
Preceding gene: 160874219
Following gene: 160874217
Centisome position: 24.32
GC content: 50.35
Gene sequence:
>846_bases GTGATTTTTAATAACGGGCGTTTACGCCATAAGCGGGTTCTTCCAGGTTTTACCATCAGCTTAGGTGTGTCCCTACTGTT TGTCAGCCTGATCCTATTATTGCCAACCACTGGGCTGATTATGCAGACCAGTTCAATGAGCTTGTCCGAATACTGGGGCG TCATCACAGATCCTCGGGTGTTGGCGAGTTACCGAGTCACCATACTATCGGCACTCGCGGCATCGTTATTTAACTGCCTT TTCGGATTGTTACTCGCATGGGTGCTGGTACGTTATGAATTCCCCGGCAAACGCATCTTAGATGCATTGGTGGATTTACC CTTTGCGTTGCCGACTGCCGTTGCAGGTATCACCTTAGCGACCCTGTATGCGGAAAACGGCCAAATCGGTAGTGTATTGG CAGAACTGGGTATAAAAGTCGCCTACACCCCGCTAGGCATAGTGGTCGCGATGATTTTCACCAGTATTCCCTTTGTGGTA CGTACCGTGCAACCGGTTCTCGAAGAGTTTTCCCACGATGAAGAAGAAGCGGGCATGACCCTTGGCGCCTCAGATCGCGC GGTATTCTGGCGGATCATTTTGCCGTCATTGTGGCCAGCCTTAATGGTCGGGACTGCACTGTCTTTTACCCGCAGCCTAG GTGAGTTTGGTGCCGTCATCTTTATTGCGGGCAACATGCCCTATATCAGCGAAATCACATCGTTAATGATCTTTGTCCGC CTGCAAGAGTTTGATTTTGCTGGTGCTAGTGCCATTGCCTCTGTGGTGCTGATGACCTCACTACTGCTATTACTGCTAAT AAACCTGTGGCAGGCGCGTTATCTGCGCCGCATTCATGGACGATAA
Upstream 100 bases:
>100_bases GCGAAGACGAATTCAATAGTCTTTAACTCAGACAGCCGATCGCTGACGGTAAATACAGCGTATTAAATTAACTCAACTAA CCTGACCGGGTGATTATTCT
Downstream 100 bases:
>100_bases GGAGCAAACATGAACTCATTTAAGCCCTTAAGAGTCGGTGAAGCACCTCTTATCAAGTGGAGCCTGATTACCCTCGCGGT GTTCTTAGGCTTGCTATTGT
Product: sulfate ABC transporter inner membrane subunit CysT
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MIFNNGRLRHKRVLPGFTISLGVSLLFVSLILLLPTTGLIMQTSSMSLSEYWGVITDPRVLASYRVTILSALAASLFNCL FGLLLAWVLVRYEFPGKRILDALVDLPFALPTAVAGITLATLYAENGQIGSVLAELGIKVAYTPLGIVVAMIFTSIPFVV RTVQPVLEEFSHDEEEAGMTLGASDRAVFWRIILPSLWPALMVGTALSFTRSLGEFGAVIFIAGNMPYISEITSLMIFVR LQEFDFAGASAIASVVLMTSLLLLLLINLWQARYLRRIHGR
Sequences:
>Translated_281_residues MIFNNGRLRHKRVLPGFTISLGVSLLFVSLILLLPTTGLIMQTSSMSLSEYWGVITDPRVLASYRVTILSALAASLFNCL FGLLLAWVLVRYEFPGKRILDALVDLPFALPTAVAGITLATLYAENGQIGSVLAELGIKVAYTPLGIVVAMIFTSIPFVV RTVQPVLEEFSHDEEEAGMTLGASDRAVFWRIILPSLWPALMVGTALSFTRSLGEFGAVIFIAGNMPYISEITSLMIFVR LQEFDFAGASAIASVVLMTSLLLLLLINLWQARYLRRIHGR >Mature_281_residues MIFNNGRLRHKRVLPGFTISLGVSLLFVSLILLLPTTGLIMQTSSMSLSEYWGVITDPRVLASYRVTILSALAASLFNCL FGLLLAWVLVRYEFPGKRILDALVDLPFALPTAVAGITLATLYAENGQIGSVLAELGIKVAYTPLGIVVAMIFTSIPFVV RTVQPVLEEFSHDEEEAGMTLGASDRAVFWRIILPSLWPALMVGTALSFTRSLGEFGAVIFIAGNMPYISEITSLMIFVR LQEFDFAGASAIASVVLMTSLLLLLLINLWQARYLRRIHGR
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0555
COG function: function code O; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=272, Percent_Identity=65.4411764705882, Blast_Score=315, Evalue=2e-87, Organism=Escherichia coli, GI87082099, Length=255, Percent_Identity=34.1176470588235, Blast_Score=145, Evalue=4e-36, Organism=Escherichia coli, GI1786980, Length=232, Percent_Identity=37.0689655172414, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI1787369, Length=217, Percent_Identity=24.8847926267281, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011865 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30827; Mature: 30827
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFNNGRLRHKRVLPGFTISLGVSLLFVSLILLLPTTGLIMQTSSMSLSEYWGVITDPRV CCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHCCCCCCHHH LASYRVTILSALAASLFNCLFGLLLAWVLVRYEFPGKRILDALVDLPFALPTAVAGITLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHH TLYAENGQIGSVLAELGIKVAYTPLGIVVAMIFTSIPFVVRTVQPVLEEFSHDEEEAGMT HHHHCCCCHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCE LGASDRAVFWRIILPSLWPALMVGTALSFTRSLGEFGAVIFIAGNMPYISEITSLMIFVR ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHH LQEFDFAGASAIASVVLMTSLLLLLLINLWQARYLRRIHGR HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIFNNGRLRHKRVLPGFTISLGVSLLFVSLILLLPTTGLIMQTSSMSLSEYWGVITDPRV CCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHCCCCCCHHH LASYRVTILSALAASLFNCLFGLLLAWVLVRYEFPGKRILDALVDLPFALPTAVAGITLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHH TLYAENGQIGSVLAELGIKVAYTPLGIVVAMIFTSIPFVVRTVQPVLEEFSHDEEEAGMT HHHHCCCCHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCE LGASDRAVFWRIILPSLWPALMVGTALSFTRSLGEFGAVIFIAGNMPYISEITSLMIFVR ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHH LQEFDFAGASAIASVVLMTSLLLLLLINLWQARYLRRIHGR HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2188958; 9205837; 9278503; 2188959 [H]