| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is cysW [H]
Identifier: 160874217
GI number: 160874217
Start: 1298990
End: 1299856
Strand: Reverse
Name: cysW [H]
Synonym: Sbal195_1097
Alternate gene names: 160874217
Gene position: 1299856-1298990 (Counterclockwise)
Preceding gene: 160874218
Following gene: 160874216
Centisome position: 24.31
GC content: 49.83
Gene sequence:
>867_bases ATGAACTCATTTAAGCCCTTAAGAGTCGGTGAAGCACCTCTTATCAAGTGGAGCCTGATTACCCTCGCGGTGTTCTTAGG CTTGCTATTGTTGCTATTGCCGCTGGTGAGTATTTTTCAGCAAGCGTTTGTCGGAGGTTGGGAGCGTTATATTGGTCACT TAACTCAGCCAGATTCGCTGCATGCGATAGGTTTGACGCTGATGGTTGCGGCGCTCACCGTCCCCATCAATTTAGTGTTC GGGATCATGCTGGCGTGGAGCGTGACTCGGTTTGAATACCCCGGTCGCAAGTTATTGATCACGCTAATTGATATTCCATT TGCGGTCTCCCCCGTCGTCGCAGGTTTGCTCTATTTACTGCTCTATGGCAACAGTGGTTGGCTGGGTGAATGGCTATATG AGCACGATCTGCAGATCATGTTTGCTTGGCCGGGAATACTGTTAGTCACCATTTTTGTCACTTGTTCCTTTGTCGCCAGA GAACTCATTCCATTAATGCAACAACAGGATGCTTCAGAAGAGGAAGCCGCAGTGATCCTCGGCGCCTCATGGTGGCAACT CTTCCGCCGAGTAACGCTCCCTAATATCAAGTGGGCACTGATTTACGGTGTGATCCTCACCAATGCCAGAGCCGTGGGCG AATTTGGTGCTGTCGCGGTTGTCTCTGGCAACATTCGTGGCGAAACCAACACCTTACCTTTACACGTGCAGTTATTGTAC GAAGATTATCAGGCCGAAGCCGCCTTCGCGAGCGCGTCATTACTGGCCTTGATCGCCCTATTTACCCTAATGTTAAAAGC CGTAGTGGAATGGCGACAACAACGCAGTTTATCCGCCAATGACAATAAAGAGCAGAGCCCATTATGA
Upstream 100 bases:
>100_bases TGCCTCTGTGGTGCTGATGACCTCACTACTGCTATTACTGCTAATAAACCTGTGGCAGGCGCGTTATCTGCGCCGCATTC ATGGACGATAAGGAGCAAAC
Downstream 100 bases:
>100_bases GTATTCGTCTTACTAATATTTCCAAGAAATTTGGCAAGTTTCAGGCGCTTTCCCCGCTGGATCTTGATATTCAAGAAGGG GAAATGATTGGTCTGCTGGG
Product: sulfate ABC transporter inner membrane subunit CysW
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MNSFKPLRVGEAPLIKWSLITLAVFLGLLLLLLPLVSIFQQAFVGGWERYIGHLTQPDSLHAIGLTLMVAALTVPINLVF GIMLAWSVTRFEYPGRKLLITLIDIPFAVSPVVAGLLYLLLYGNSGWLGEWLYEHDLQIMFAWPGILLVTIFVTCSFVAR ELIPLMQQQDASEEEAAVILGASWWQLFRRVTLPNIKWALIYGVILTNARAVGEFGAVAVVSGNIRGETNTLPLHVQLLY EDYQAEAAFASASLLALIALFTLMLKAVVEWRQQRSLSANDNKEQSPL
Sequences:
>Translated_288_residues MNSFKPLRVGEAPLIKWSLITLAVFLGLLLLLLPLVSIFQQAFVGGWERYIGHLTQPDSLHAIGLTLMVAALTVPINLVF GIMLAWSVTRFEYPGRKLLITLIDIPFAVSPVVAGLLYLLLYGNSGWLGEWLYEHDLQIMFAWPGILLVTIFVTCSFVAR ELIPLMQQQDASEEEAAVILGASWWQLFRRVTLPNIKWALIYGVILTNARAVGEFGAVAVVSGNIRGETNTLPLHVQLLY EDYQAEAAFASASLLALIALFTLMLKAVVEWRQQRSLSANDNKEQSPL >Mature_288_residues MNSFKPLRVGEAPLIKWSLITLAVFLGLLLLLLPLVSIFQQAFVGGWERYIGHLTQPDSLHAIGLTLMVAALTVPINLVF GIMLAWSVTRFEYPGRKLLITLIDIPFAVSPVVAGLLYLLLYGNSGWLGEWLYEHDLQIMFAWPGILLVTIFVTCSFVAR ELIPLMQQQDASEEEAAVILGASWWQLFRRVTLPNIKWALIYGVILTNARAVGEFGAVAVVSGNIRGETNTLPLHVQLLY EDYQAEAAFASASLLALIALFTLMLKAVVEWRQQRSLSANDNKEQSPL
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=273, Percent_Identity=59.3406593406593, Blast_Score=336, Evalue=1e-93, Organism=Escherichia coli, GI1788764, Length=207, Percent_Identity=40.0966183574879, Blast_Score=154, Evalue=7e-39, Organism=Escherichia coli, GI1786980, Length=220, Percent_Identity=34.0909090909091, Blast_Score=103, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32021; Mature: 32021
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSFKPLRVGEAPLIKWSLITLAVFLGLLLLLLPLVSIFQQAFVGGWERYIGHLTQPDSL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCH HAIGLTLMVAALTVPINLVFGIMLAWSVTRFEYPGRKLLITLIDIPFAVSPVVAGLLYLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHH LYGNSGWLGEWLYEHDLQIMFAWPGILLVTIFVTCSFVARELIPLMQQQDASEEEAAVIL HHCCCCCHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE GASWWQLFRRVTLPNIKWALIYGVILTNARAVGEFGAVAVVSGNIRGETNTLPLHVQLLY CHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHCCCCEEEEECCCCCCCCCCEEEEEEEH EDYQAEAAFASASLLALIALFTLMLKAVVEWRQQRSLSANDNKEQSPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MNSFKPLRVGEAPLIKWSLITLAVFLGLLLLLLPLVSIFQQAFVGGWERYIGHLTQPDSL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCH HAIGLTLMVAALTVPINLVFGIMLAWSVTRFEYPGRKLLITLIDIPFAVSPVVAGLLYLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHH LYGNSGWLGEWLYEHDLQIMFAWPGILLVTIFVTCSFVARELIPLMQQQDASEEEAAVIL HHCCCCCHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE GASWWQLFRRVTLPNIKWALIYGVILTNARAVGEFGAVAVVSGNIRGETNTLPLHVQLLY CHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHCCCCEEEEECCCCCCCCCCEEEEEEEH EDYQAEAAFASASLLALIALFTLMLKAVVEWRQQRSLSANDNKEQSPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]