| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874209
Identifier: 160874209
GI number: 160874209
Start: 1287122
End: 1289419
Strand: Reverse
Name: 160874209
Synonym: Sbal195_1089
Alternate gene names: NA
Gene position: 1289419-1287122 (Counterclockwise)
Preceding gene: 160874210
Following gene: 160874202
Centisome position: 24.11
GC content: 49.43
Gene sequence:
>2298_bases ATGCGCCATAAGCCAAAATCATCATCCACAATGGCAACATCCAATCGGGCTTTTATGCTTAAAAAGACCACACTTATCTG TTTAAGCCTATTTTCGCCAATGCTCTTGGCCTGCGGCCCCGATTTCCCTTTGCAATTGACTCAAGACAGGCAGAGTAATC TCAGTTATTTACCGCAAACCTCCTTTAGCCAGCAGCTTACCGCCCTCGCAAAACCTTTGCCTTGGCAGTATCAAGATGCG CCAGCCGCGCAGGAATATCTGTGGGATGAAGTGCATAGCCGTTATCTGTCACAAACTCGCGCCTTTGAAAACAGCGAGTT AAGTGAAGCACATTTAATTTTAGTGAACACACTACGGGATGCGACAGGTCCAATCGAGGCCGAACAAATGGCTGCGAAGT TGGATAAGGATCTGCCCCAAGCGCTGACCTGGTACACCTTAGGCGCCGTGGCGTTTGAGGCAAAAGATTATGATAGAGCG AGTAACTATTTTAGCAAAATCATTAAATTACCAGAAAGCGAACGCGCATCTCGCAGCCTGTGGGCACTCTATTCGCTCTC GCGTATTGAGCTTATCTTAAGTAAGACCTCGGCGGATCCTGAGCACTTTAATCGTGCCAACGCTTATCTGACACAATTGC AAACCGAAGTCGCCCAAGGCGCCGCCGATCCCCTGCGTTTGAGCTTAGCAAGCCTAGGCGAGCAAGCCTATATCCTGCTT CACCAAGGCCAGCCGCTCCCGCAAGTGACCAATCAAGGTGCAGGTGAAACCGAGTCAGAGCTGCAAATCACGCTTAACCC TGATGCACTGAATAAGGCGATTGAGCTCTACGCCACCCAATCGGTACAAGGCGATAGCGGCGGTTATGATTCCTTATTGA TGTTAAGCCGTACCTTGATGGGGAAAGACATTGCTGAGCTGAAACCGTTGCTGCAACAGACAAGCGTGCAGCAGTTATTG ATTGCCTATTGGCAAAGCAGCACCAATGAATTTGCCTACGATGGCCAGCTTTCGGAAATGGGCTCAAAGGTAGCTGACAT CCTCAAAGTGTTTCCAACCGATGGTTTACAACTCAACCATGGCGATAAGTTAGCCGCGATTTATTACCAGCTTGGGGATT ATGCCAGTGCTGAGCGCCTATTGACGCTAGCGAAACCCAGCGGCCTCACTTGGTGGCTCAACGCAAAATTACTGCTACAA AAGGGCGATCAAGCAGAAGCGGCCAAGGCCTATGCTCAGGCAGCGCGTCACTTCCCCAAACAGTCTAATGAAGCATTGGC CACAGTTGATGCTAAAGAGACTCAACAGCAAGCCATTAATGCCGATGAAGATATAGCCACTTACTGTCGTATTCGCGCAG AGCAAGGCGTGTTATCACTAGAGCGCGGCGAATATGTCGATGCGCTCAATCACTTACTCGCCAGCGGCGACGAGTACTGG CAAGACATCGCCTATGTGGCGGAGCGCGTTCTCACCACGGCTGAACTTAAGTTATTTATCGATGAGCATGTGCCGCTTAT CGCCTTCGAATATCCTAAAGATAGCGACTGGTACGATAACATTGAGCCGATTAACAATCGCTTACGCTATTTACTAGGCC GCAGATTATTACGTGAAGGCGCAATTGCCGAAGCGCCTGCTTATTTCCCTAATCCTAATCTTAATGCCAGCGCCCTCACC TATGGCACTGAGCTGAAAGCGGCGAAAAATGCAACAAGCATTGATAGCGCTAAGGCCTATTGGGCTGCAGCAGAACTTGC CCGCCATCAAGGTATGGAAATCTTAGGGTTTGAATTAGCCCCGGATTACTCTATATACCAAGGGGTATTCGATCTAAGCG ATTGGAATGAACCGAGCAAATTGGCCGAAAAAGAACAGTTGCGGTTAAGCGCCAGCCAAGCCGTTCCCGATAAACGCTTT CATTATCGTTACACGGCGGCGGAACTGGCCAACAAGGCATCGGATCATGTGCCCCACAACAGCCAAGCCTACGCCGCGCT ACTCTGCCAAGCGACTGGATGGGTATTGTATCGAGATCAAGAACTTGCCCTACGCTACTACAAAAAATACGTCGCCAACG GCCCCTTTGTGCCTTGGGCCGAAAACTTTGGTATGCAGTGTGAAACGCCCGATTTTGACGGGGCAGTAAAACGAGCACAG GCCAATGAAATTGCAGAATGGAACGCCCTGTACCACAAGCTGAAAAAGCCCGTCGTATTTGGCGTATTAGCAATCATGGG CTTATTGGGTGTGTGGTGGATGCGTAGAAGATCTAAAAAACAACAAAATAACCTTTAA
Upstream 100 bases:
>100_bases CCGCAAGCAAACAAACAAACTCAAAAACACATGCTCAACCCTGGCGGCCAGAAAGTGATAGGCTGGGCACGTTGTGAGTC ATTATATTTACAGGGAATTT
Downstream 100 bases:
>100_bases ATATATAGAGATATGGCGCATAGCTGACCTTCACTATACGCCATTTTCATATCATGCAGTTTAGTTAAAGTAAGGTGTAA CAGTAAGATTAATCTCCTTG
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: Tetratricopeptide Repeat Family; Tetratricopeptide Domain-Containing Protein
Number of amino acids: Translated: 765; Mature: 765
Protein sequence:
>765_residues MRHKPKSSSTMATSNRAFMLKKTTLICLSLFSPMLLACGPDFPLQLTQDRQSNLSYLPQTSFSQQLTALAKPLPWQYQDA PAAQEYLWDEVHSRYLSQTRAFENSELSEAHLILVNTLRDATGPIEAEQMAAKLDKDLPQALTWYTLGAVAFEAKDYDRA SNYFSKIIKLPESERASRSLWALYSLSRIELILSKTSADPEHFNRANAYLTQLQTEVAQGAADPLRLSLASLGEQAYILL HQGQPLPQVTNQGAGETESELQITLNPDALNKAIELYATQSVQGDSGGYDSLLMLSRTLMGKDIAELKPLLQQTSVQQLL IAYWQSSTNEFAYDGQLSEMGSKVADILKVFPTDGLQLNHGDKLAAIYYQLGDYASAERLLTLAKPSGLTWWLNAKLLLQ KGDQAEAAKAYAQAARHFPKQSNEALATVDAKETQQQAINADEDIATYCRIRAEQGVLSLERGEYVDALNHLLASGDEYW QDIAYVAERVLTTAELKLFIDEHVPLIAFEYPKDSDWYDNIEPINNRLRYLLGRRLLREGAIAEAPAYFPNPNLNASALT YGTELKAAKNATSIDSAKAYWAAAELARHQGMEILGFELAPDYSIYQGVFDLSDWNEPSKLAEKEQLRLSASQAVPDKRF HYRYTAAELANKASDHVPHNSQAYAALLCQATGWVLYRDQELALRYYKKYVANGPFVPWAENFGMQCETPDFDGAVKRAQ ANEIAEWNALYHKLKKPVVFGVLAIMGLLGVWWMRRRSKKQQNNL
Sequences:
>Translated_765_residues MRHKPKSSSTMATSNRAFMLKKTTLICLSLFSPMLLACGPDFPLQLTQDRQSNLSYLPQTSFSQQLTALAKPLPWQYQDA PAAQEYLWDEVHSRYLSQTRAFENSELSEAHLILVNTLRDATGPIEAEQMAAKLDKDLPQALTWYTLGAVAFEAKDYDRA SNYFSKIIKLPESERASRSLWALYSLSRIELILSKTSADPEHFNRANAYLTQLQTEVAQGAADPLRLSLASLGEQAYILL HQGQPLPQVTNQGAGETESELQITLNPDALNKAIELYATQSVQGDSGGYDSLLMLSRTLMGKDIAELKPLLQQTSVQQLL IAYWQSSTNEFAYDGQLSEMGSKVADILKVFPTDGLQLNHGDKLAAIYYQLGDYASAERLLTLAKPSGLTWWLNAKLLLQ KGDQAEAAKAYAQAARHFPKQSNEALATVDAKETQQQAINADEDIATYCRIRAEQGVLSLERGEYVDALNHLLASGDEYW QDIAYVAERVLTTAELKLFIDEHVPLIAFEYPKDSDWYDNIEPINNRLRYLLGRRLLREGAIAEAPAYFPNPNLNASALT YGTELKAAKNATSIDSAKAYWAAAELARHQGMEILGFELAPDYSIYQGVFDLSDWNEPSKLAEKEQLRLSASQAVPDKRF HYRYTAAELANKASDHVPHNSQAYAALLCQATGWVLYRDQELALRYYKKYVANGPFVPWAENFGMQCETPDFDGAVKRAQ ANEIAEWNALYHKLKKPVVFGVLAIMGLLGVWWMRRRSKKQQNNL >Mature_765_residues MRHKPKSSSTMATSNRAFMLKKTTLICLSLFSPMLLACGPDFPLQLTQDRQSNLSYLPQTSFSQQLTALAKPLPWQYQDA PAAQEYLWDEVHSRYLSQTRAFENSELSEAHLILVNTLRDATGPIEAEQMAAKLDKDLPQALTWYTLGAVAFEAKDYDRA SNYFSKIIKLPESERASRSLWALYSLSRIELILSKTSADPEHFNRANAYLTQLQTEVAQGAADPLRLSLASLGEQAYILL HQGQPLPQVTNQGAGETESELQITLNPDALNKAIELYATQSVQGDSGGYDSLLMLSRTLMGKDIAELKPLLQQTSVQQLL IAYWQSSTNEFAYDGQLSEMGSKVADILKVFPTDGLQLNHGDKLAAIYYQLGDYASAERLLTLAKPSGLTWWLNAKLLLQ KGDQAEAAKAYAQAARHFPKQSNEALATVDAKETQQQAINADEDIATYCRIRAEQGVLSLERGEYVDALNHLLASGDEYW QDIAYVAERVLTTAELKLFIDEHVPLIAFEYPKDSDWYDNIEPINNRLRYLLGRRLLREGAIAEAPAYFPNPNLNASALT YGTELKAAKNATSIDSAKAYWAAAELARHQGMEILGFELAPDYSIYQGVFDLSDWNEPSKLAEKEQLRLSASQAVPDKRF HYRYTAAELANKASDHVPHNSQAYAALLCQATGWVLYRDQELALRYYKKYVANGPFVPWAENFGMQCETPDFDGAVKRAQ ANEIAEWNALYHKLKKPVVFGVLAIMGLLGVWWMRRRSKKQQNNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85774; Mature: 85774
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHKPKSSSTMATSNRAFMLKKTTLICLSLFSPMLLACGPDFPLQLTQDRQSNLSYLPQT CCCCCCCCCCEECCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCC SFSQQLTALAKPLPWQYQDAPAAQEYLWDEVHSRYLSQTRAFENSELSEAHLILVNTLRD CHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEHHHC ATGPIEAEQMAAKLDKDLPQALTWYTLGAVAFEAKDYDRASNYFSKIIKLPESERASRSL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHCCCCCHHHHHHH WALYSLSRIELILSKTSADPEHFNRANAYLTQLQTEVAQGAADPLRLSLASLGEQAYILL HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEE HQGQPLPQVTNQGAGETESELQITLNPDALNKAIELYATQSVQGDSGGYDSLLMLSRTLM ECCCCCHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHH GKDIAELKPLLQQTSVQQLLIAYWQSSTNEFAYDGQLSEMGSKVADILKVFPTDGLQLNH CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHCCCCCEEECC GDKLAAIYYQLGDYASAERLLTLAKPSGLTWWLNAKLLLQKGDQAEAAKAYAQAARHFPK CCCCEEHHHHHCCCCCHHHHEEEECCCCCEEEECCEEEEECCCHHHHHHHHHHHHHHCCC QSNEALATVDAKETQQQAINADEDIATYCRIRAEQGVLSLERGEYVDALNHLLASGDEYW CCCCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHCCHHHH QDIAYVAERVLTTAELKLFIDEHVPLIAFEYPKDSDWYDNIEPINNRLRYLLGRRLLREG HHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCC AIAEAPAYFPNPNLNASALTYGTELKAAKNATSIDSAKAYWAAAELARHQGMEILGFELA CCCCCCCCCCCCCCCCHHEEECCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECC PDYSIYQGVFDLSDWNEPSKLAEKEQLRLSASQAVPDKRFHYRYTAAELANKASDHVPHN CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHEEEEHHHHHHHHHHHCCCCC SQAYAALLCQATGWVLYRDQELALRYYKKYVANGPFVPWAENFGMQCETPDFDGAVKRAQ CHHHHHHHHHHCCEEEEECHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCHHHHHHH ANEIAEWNALYHKLKKPVVFGVLAIMGLLGVWWMRRRSKKQQNNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRHKPKSSSTMATSNRAFMLKKTTLICLSLFSPMLLACGPDFPLQLTQDRQSNLSYLPQT CCCCCCCCCCEECCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCC SFSQQLTALAKPLPWQYQDAPAAQEYLWDEVHSRYLSQTRAFENSELSEAHLILVNTLRD CHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEHHHC ATGPIEAEQMAAKLDKDLPQALTWYTLGAVAFEAKDYDRASNYFSKIIKLPESERASRSL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHCCCCCHHHHHHH WALYSLSRIELILSKTSADPEHFNRANAYLTQLQTEVAQGAADPLRLSLASLGEQAYILL HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEE HQGQPLPQVTNQGAGETESELQITLNPDALNKAIELYATQSVQGDSGGYDSLLMLSRTLM ECCCCCHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHH GKDIAELKPLLQQTSVQQLLIAYWQSSTNEFAYDGQLSEMGSKVADILKVFPTDGLQLNH CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHCCCCCEEECC GDKLAAIYYQLGDYASAERLLTLAKPSGLTWWLNAKLLLQKGDQAEAAKAYAQAARHFPK CCCCEEHHHHHCCCCCHHHHEEEECCCCCEEEECCEEEEECCCHHHHHHHHHHHHHHCCC QSNEALATVDAKETQQQAINADEDIATYCRIRAEQGVLSLERGEYVDALNHLLASGDEYW CCCCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHCCHHHH QDIAYVAERVLTTAELKLFIDEHVPLIAFEYPKDSDWYDNIEPINNRLRYLLGRRLLREG HHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCC AIAEAPAYFPNPNLNASALTYGTELKAAKNATSIDSAKAYWAAAELARHQGMEILGFELA CCCCCCCCCCCCCCCCHHEEECCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECC PDYSIYQGVFDLSDWNEPSKLAEKEQLRLSASQAVPDKRFHYRYTAAELANKASDHVPHN CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHEEEEHHHHHHHHHHHCCCCC SQAYAALLCQATGWVLYRDQELALRYYKKYVANGPFVPWAENFGMQCETPDFDGAVKRAQ CHHHHHHHHHHCCEEEEECHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCHHHHHHH ANEIAEWNALYHKLKKPVVFGVLAIMGLLGVWWMRRRSKKQQNNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA