| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874210
Identifier: 160874210
GI number: 160874210
Start: 1289409
End: 1290869
Strand: Reverse
Name: 160874210
Synonym: Sbal195_1090
Alternate gene names: NA
Gene position: 1290869-1289409 (Counterclockwise)
Preceding gene: 160874211
Following gene: 160874209
Centisome position: 24.14
GC content: 49.83
Gene sequence:
>1461_bases ATGGGCATAGGCAATCTGGTTAAAAACATTAGCCGAAATCAATGGCTGTTATTCGCTTTGCTGAGCACCACTCTATTCGT AAGCGCCTGTCAGCCCGCATCGGAACCGAGTGAACTCAAGACAACCCCAGATGCCAGTCATACAGCAGAAGTCACCTCAG CAACCGCAATGCCTCGTGCTCCGCTCACCCAGGAAGTCTATATCTGGCAGCGCCAATGGCGCCCCGCCAATCAAACGGCA TTAGTGCAAAGCCAAGGAGCATTCCAAGGATTGCGCATTTTAGCGCTGCAAGCACATCCAAAACCCAATGGCGCAGACAT TTGGTTTGAAGTCGCGGTCAATCATGCTTGGCTACAGGCAGATCCTAGACCCAAAATCGCCGTGATTCGCTTAGATGGTC AGTTCGTGCATTTAAATGATGAACAAGTGATCCGTAAAATCAGCCAAGTACTGACAGATTGGCAGGCAAAAGGCACGCAC ATAGCCGGAGTTGAAATCGATCACGACAGCGCTAGCAGCAAACTGCCCGCCTATCGGGATTTTCTTAAAAAGCTTAAAGC GCAGTTACCTGCTGACCTTAAACTCAGCATTACCGCCCTGCCCGCTTGGCTCAATAGCGCCAATTTCCCCGCATTACTCA CCAATATCGATGAACTCGTGCTGCAAATTCACAGCGTGAGCGACCCACGCCTCGGACTATTCGATGCCGATCAAGGTTGG CAATGGGTGCAGCAACTCTCAAAAATCAGTACTGTACCTTATCTTATTGCGCTTCCCGCTTACGGCTCGGCGGTCATCAG CACAGCTTCAGGTTATAAAGTTGAGAGTGAAACACCGCTTCGAGGTCAACTCAATGATACCCATGCAGTACAGGAACTGA TGGCCGATCCGCAAGTGTTGCAAGCTTTTGTGCACAAACTGCAAAGCCACGCGGATGCCAAGCTCAAAGGCATTATCTGG TTCAGGCTGCCGCTGGAAGGGGATAAAAGAGTCTGGCCACTCGACACCTTAATCGCCGTTGCGCAGCAAGGTAAACTTGC CGCCAAGATTGAATTAGTGATCTCAAGCGATAACGATACCCAAACGACATTAGCCACTGAAAATAAGACTAAAAACCAAG AAATCCTCAAGCCACAGCTATTCCAACTGAGCTTAATTAATCGCGGTAATATTGCTGGCGAGATTCCCACGACTTTGTCC CTAGCGGGACAAGCTTGCAGCGGGTATGATGCGCAAAATGGCTATCGCGTAATACAAAAAAATGGCCTGTTAGTCTGGCA GTGGCGAGCTGACAATACCGCCGCGTTGGCGCCGACTGACACTGCTCCAAGCGCGACGAACATGCCAATGCCGCAAGCAA ACAAACAAACTCAAAAACACATGCTCAACCCTGGCGGCCAGAAAGTGATAGGCTGGGCACGTTGTGAGTCATTATATTTA CAGGGAATTTATGCGCCATAA
Upstream 100 bases:
>100_bases GAAGACTAAGATTTGATGCAGGCTCTTTGACCGCAATGTAAAAGCGGGCTTTTTCGGGCATAGTAATGCCTCACTCAAAA ACGGAACCGATAGCAATACT
Downstream 100 bases:
>100_bases GCCAAAATCATCATCCACAATGGCAACATCCAATCGGGCTTTTATGCTTAAAAAGACCACACTTATCTGTTTAAGCCTAT TTTCGCCAATGCTCTTGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 486; Mature: 485
Protein sequence:
>486_residues MGIGNLVKNISRNQWLLFALLSTTLFVSACQPASEPSELKTTPDASHTAEVTSATAMPRAPLTQEVYIWQRQWRPANQTA LVQSQGAFQGLRILALQAHPKPNGADIWFEVAVNHAWLQADPRPKIAVIRLDGQFVHLNDEQVIRKISQVLTDWQAKGTH IAGVEIDHDSASSKLPAYRDFLKKLKAQLPADLKLSITALPAWLNSANFPALLTNIDELVLQIHSVSDPRLGLFDADQGW QWVQQLSKISTVPYLIALPAYGSAVISTASGYKVESETPLRGQLNDTHAVQELMADPQVLQAFVHKLQSHADAKLKGIIW FRLPLEGDKRVWPLDTLIAVAQQGKLAAKIELVISSDNDTQTTLATENKTKNQEILKPQLFQLSLINRGNIAGEIPTTLS LAGQACSGYDAQNGYRVIQKNGLLVWQWRADNTAALAPTDTAPSATNMPMPQANKQTQKHMLNPGGQKVIGWARCESLYL QGIYAP
Sequences:
>Translated_486_residues MGIGNLVKNISRNQWLLFALLSTTLFVSACQPASEPSELKTTPDASHTAEVTSATAMPRAPLTQEVYIWQRQWRPANQTA LVQSQGAFQGLRILALQAHPKPNGADIWFEVAVNHAWLQADPRPKIAVIRLDGQFVHLNDEQVIRKISQVLTDWQAKGTH IAGVEIDHDSASSKLPAYRDFLKKLKAQLPADLKLSITALPAWLNSANFPALLTNIDELVLQIHSVSDPRLGLFDADQGW QWVQQLSKISTVPYLIALPAYGSAVISTASGYKVESETPLRGQLNDTHAVQELMADPQVLQAFVHKLQSHADAKLKGIIW FRLPLEGDKRVWPLDTLIAVAQQGKLAAKIELVISSDNDTQTTLATENKTKNQEILKPQLFQLSLINRGNIAGEIPTTLS LAGQACSGYDAQNGYRVIQKNGLLVWQWRADNTAALAPTDTAPSATNMPMPQANKQTQKHMLNPGGQKVIGWARCESLYL QGIYAP >Mature_485_residues GIGNLVKNISRNQWLLFALLSTTLFVSACQPASEPSELKTTPDASHTAEVTSATAMPRAPLTQEVYIWQRQWRPANQTAL VQSQGAFQGLRILALQAHPKPNGADIWFEVAVNHAWLQADPRPKIAVIRLDGQFVHLNDEQVIRKISQVLTDWQAKGTHI AGVEIDHDSASSKLPAYRDFLKKLKAQLPADLKLSITALPAWLNSANFPALLTNIDELVLQIHSVSDPRLGLFDADQGWQ WVQQLSKISTVPYLIALPAYGSAVISTASGYKVESETPLRGQLNDTHAVQELMADPQVLQAFVHKLQSHADAKLKGIIWF RLPLEGDKRVWPLDTLIAVAQQGKLAAKIELVISSDNDTQTTLATENKTKNQEILKPQLFQLSLINRGNIAGEIPTTLSL AGQACSGYDAQNGYRVIQKNGLLVWQWRADNTAALAPTDTAPSATNMPMPQANKQTQKHMLNPGGQKVIGWARCESLYLQ GIYAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53474; Mature: 53342
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIGNLVKNISRNQWLLFALLSTTLFVSACQPASEPSELKTTPDASHTAEVTSATAMPRA CCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC PLTQEVYIWQRQWRPANQTALVQSQGAFQGLRILALQAHPKPNGADIWFEVAVNHAWLQA CCCHHEEEEHHCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEEEECEEEEEC DPRPKIAVIRLDGQFVHLNDEQVIRKISQVLTDWQAKGTHIAGVEIDHDSASSKLPAYRD CCCCCEEEEEECCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHH FLKKLKAQLPADLKLSITALPAWLNSANFPALLTNIDELVLQIHSVSDPRLGLFDADQGW HHHHHHHHCCCCCEEEEEEEHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCH QWVQQLSKISTVPYLIALPAYGSAVISTASGYKVESETPLRGQLNDTHAVQELMADPQVL HHHHHHHHHCCCCEEEEECCCCCEEEECCCCCEECCCCCCCCCCCHHHHHHHHHCCHHHH QAFVHKLQSHADAKLKGIIWFRLPLEGDKRVWPLDTLIAVAQQGKLAAKIELVISSDNDT HHHHHHHHHCCCCEEEEEEEEEEECCCCCEECCHHHHHHHHHCCCEEEEEEEEEECCCCC QTTLATENKTKNQEILKPQLFQLSLINRGNIAGEIPTTLSLAGQACSGYDAQNGYRVIQK EEEEEECCCCCCHHHCCCCEEEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEE NGLLVWQWRADNTAALAPTDTAPSATNMPMPQANKQTQKHMLNPGGQKVIGWARCESLYL CCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEHHHHHHHHE QGIYAP EEECCC >Mature Secondary Structure GIGNLVKNISRNQWLLFALLSTTLFVSACQPASEPSELKTTPDASHTAEVTSATAMPRA CHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC PLTQEVYIWQRQWRPANQTALVQSQGAFQGLRILALQAHPKPNGADIWFEVAVNHAWLQA CCCHHEEEEHHCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEEEECEEEEEC DPRPKIAVIRLDGQFVHLNDEQVIRKISQVLTDWQAKGTHIAGVEIDHDSASSKLPAYRD CCCCCEEEEEECCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHH FLKKLKAQLPADLKLSITALPAWLNSANFPALLTNIDELVLQIHSVSDPRLGLFDADQGW HHHHHHHHCCCCCEEEEEEEHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCH QWVQQLSKISTVPYLIALPAYGSAVISTASGYKVESETPLRGQLNDTHAVQELMADPQVL HHHHHHHHHCCCCEEEEECCCCCEEEECCCCCEECCCCCCCCCCCHHHHHHHHHCCHHHH QAFVHKLQSHADAKLKGIIWFRLPLEGDKRVWPLDTLIAVAQQGKLAAKIELVISSDNDT HHHHHHHHHCCCCEEEEEEEEEEECCCCCEECCHHHHHHHHHCCCEEEEEEEEEECCCCC QTTLATENKTKNQEILKPQLFQLSLINRGNIAGEIPTTLSLAGQACSGYDAQNGYRVIQK EEEEEECCCCCCHHHCCCCEEEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEE NGLLVWQWRADNTAALAPTDTAPSATNMPMPQANKQTQKHMLNPGGQKVIGWARCESLYL CCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEHHHHHHHHE QGIYAP EEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA