| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160874165
Identifier: 160874165
GI number: 160874165
Start: 1240858
End: 1241409
Strand: Reverse
Name: 160874165
Synonym: Sbal195_1045
Alternate gene names: NA
Gene position: 1241409-1240858 (Counterclockwise)
Preceding gene: 160874167
Following gene: 160874164
Centisome position: 23.22
GC content: 45.83
Gene sequence:
>552_bases ATGAGCCAGACAATTACAGCCGATCAAATACTGACATTTTGGTTTGAAGAAATTGAGCCAAAGCTTTGGTGGATTAAAGA TGTTGAATTTGACGAACAAATCAAACAGCGCTTTGAGGACGTATTAGTCCAAGCTAAACGTGGGGAGCTTTCCCATTGGC GAGTCACGCCCCAAGGCCGATTAGCAGAGATCATAGTACTCGACCAATTCTCCCGTAATATTTACCGTGATACGCCTGCC GCTTTCGAAGCCGATGCCATCGCCTTAGTGCTCGCCCAAGAAGCCGTTGCCCAACAGGTTGATTTAGCAGTTAAACCTAA ACAAGTGCCCTTTCTCTTTATGCCCTATATGCACAGCGAGTCGGCCATGATCCATCAAGTCGCGGTTAAACTGTTTAACC GCGAAGCGGCGATAGGAAACTTAGCGTTTGAACTGAAACATAAGGCAATTATCGACAGATTTGGTCGCTATCCACATAGA AATGCCATCTTAGGCAGAGAATCGACAGCAGAGGAAATTGCCTTTCTGCGTGAACCTGACTCATCCTTTTAA
Upstream 100 bases:
>100_bases AGATAACCAATCTCCCCCTAAATCAAGCGAAACGACTTGTCATCCTCCCCCAACAACTGTTATTTGTAATGTCACTCACC ACCTATGAGGGAACGCTAAG
Downstream 100 bases:
>100_bases TTCGCTCATTCTTTAGCGTATTTGGATAAATAAAGCCGTGCGAAGTTCACAGACACACTACACTTATTCAATCGAGTCAT GGAAAGACTGACGAGTGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MSQTITADQILTFWFEEIEPKLWWIKDVEFDEQIKQRFEDVLVQAKRGELSHWRVTPQGRLAEIIVLDQFSRNIYRDTPA AFEADAIALVLAQEAVAQQVDLAVKPKQVPFLFMPYMHSESAMIHQVAVKLFNREAAIGNLAFELKHKAIIDRFGRYPHR NAILGRESTAEEIAFLREPDSSF
Sequences:
>Translated_183_residues MSQTITADQILTFWFEEIEPKLWWIKDVEFDEQIKQRFEDVLVQAKRGELSHWRVTPQGRLAEIIVLDQFSRNIYRDTPA AFEADAIALVLAQEAVAQQVDLAVKPKQVPFLFMPYMHSESAMIHQVAVKLFNREAAIGNLAFELKHKAIIDRFGRYPHR NAILGRESTAEEIAFLREPDSSF >Mature_182_residues SQTITADQILTFWFEEIEPKLWWIKDVEFDEQIKQRFEDVLVQAKRGELSHWRVTPQGRLAEIIVLDQFSRNIYRDTPAA FEADAIALVLAQEAVAQQVDLAVKPKQVPFLFMPYMHSESAMIHQVAVKLFNREAAIGNLAFELKHKAIIDRFGRYPHRN AILGRESTAEEIAFLREPDSSF
Specific function: Unknown
COG id: COG3803
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21187; Mature: 21055
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQTITADQILTFWFEEIEPKLWWIKDVEFDEQIKQRFEDVLVQAKRGELSHWRVTPQGR CCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC LAEIIVLDQFSRNIYRDTPAAFEADAIALVLAQEAVAQQVDLAVKPKQVPFLFMPYMHSE EEEEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCC SAMIHQVAVKLFNREAAIGNLAFELKHKAIIDRFGRYPHRNAILGRESTAEEIAFLREPD HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCC SSF CCC >Mature Secondary Structure SQTITADQILTFWFEEIEPKLWWIKDVEFDEQIKQRFEDVLVQAKRGELSHWRVTPQGR CCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC LAEIIVLDQFSRNIYRDTPAAFEADAIALVLAQEAVAQQVDLAVKPKQVPFLFMPYMHSE EEEEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCC SAMIHQVAVKLFNREAAIGNLAFELKHKAIIDRFGRYPHRNAILGRESTAEEIAFLREPD HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCC SSF CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA