| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160874164
Identifier: 160874164
GI number: 160874164
Start: 1239856
End: 1240716
Strand: Reverse
Name: 160874164
Synonym: Sbal195_1044
Alternate gene names: NA
Gene position: 1240716-1239856 (Counterclockwise)
Preceding gene: 160874165
Following gene: 160874160
Centisome position: 23.2
GC content: 43.21
Gene sequence:
>861_bases ATGGCGCATAATCAAAATAAGCCAAATAGCTCAGTGGCTCGTAGTAACAACCGCTATATATTGATGGGGTTACTCACCTT ATGCGGCGCTCAGCTCGGCCAAGCGGCAGAAATTAAGATAGGCGTCAGTCTGTCTATCCCCCCTTATGTCATCCAAGAAA CAAATAGCGGGCTCGAACTCGAATTACTTAACCAAGCCCTCGCCGTTAAAGGTCATACAGCTTCTATCCACTACTTACCT CTAGCACGCACTTTCCATGAACTCAGGGAAGGTAAACTCGATGGTATCATCAACATTAAAGATGGCATGATCGACAACGT CTTTTACTCCAATGTTGCGATAACCTACCAAAACTGCGCCATTAGCCTCGAAGCCAATCATTTTACTATCAATAACATAA ACGACTTAAACAACAAGCAAGTCGTCTCCTTTCAGCGTGCATCATCGCTACTGGGGGAAGAATTTGCCAGAATGGCCAAA GCTAATAGTGGCTACCAAGAACAAGCGAGGCAAGTACAGCAAGTTTATATGCTGATGAAACACAGGGCCGATGTCGTGGT GATGGATAAAAATATCTTCAAATACTACTTAAAGCAGGCCTACCTTGAGGGGAAACTCACTGAGAAAGATTCAACACAAC AGGCCATTTGCCACCAAATATTCCCACCAACAGAATACAAGTTTGCCTTTCTCAGTGAACAAATTCGGGATGATTTTAAT GCGGGACTCAAACAAATTACCCAAGATGGGAGCTTAGTGGCCTTGCAGGAAAAGTATCGACGCCTGATGTCATTTGAAAA TGAAGCCGAGGTGTCAAACAAGCTAACTGAACCTAAAATAATAAAAAATGATTCCTACTAG
Upstream 100 bases:
>100_bases GAAGTTCACAGACACACTACACTTATTCAATCGAGTCATGGAAAGACTGACGAGTGTCAAACACAGTTGCAAGTGTGTAC CGCGGAGGTGTTGGTAACTT
Downstream 100 bases:
>100_bases GTTTTCTCAAAGAGCTTTATCTAAAGCTCTTTACTTAAACCTATATATCTAAGCTTTATTTCACCACCAGCACAGGGCAC TTAGCATACTTAACAATATC
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: ABC-Type Amino Acid Transport/Signal Transduction Systems; Amino Acid ABC Transporter Periplasmic Protein; ABC Polar Amino Acid Transport System; Amino Acid Transporter; Signal Transduction Histidine Kinase-Like Protein
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MAHNQNKPNSSVARSNNRYILMGLLTLCGAQLGQAAEIKIGVSLSIPPYVIQETNSGLELELLNQALAVKGHTASIHYLP LARTFHELREGKLDGIINIKDGMIDNVFYSNVAITYQNCAISLEANHFTINNINDLNNKQVVSFQRASSLLGEEFARMAK ANSGYQEQARQVQQVYMLMKHRADVVVMDKNIFKYYLKQAYLEGKLTEKDSTQQAICHQIFPPTEYKFAFLSEQIRDDFN AGLKQITQDGSLVALQEKYRRLMSFENEAEVSNKLTEPKIIKNDSY
Sequences:
>Translated_286_residues MAHNQNKPNSSVARSNNRYILMGLLTLCGAQLGQAAEIKIGVSLSIPPYVIQETNSGLELELLNQALAVKGHTASIHYLP LARTFHELREGKLDGIINIKDGMIDNVFYSNVAITYQNCAISLEANHFTINNINDLNNKQVVSFQRASSLLGEEFARMAK ANSGYQEQARQVQQVYMLMKHRADVVVMDKNIFKYYLKQAYLEGKLTEKDSTQQAICHQIFPPTEYKFAFLSEQIRDDFN AGLKQITQDGSLVALQEKYRRLMSFENEAEVSNKLTEPKIIKNDSY >Mature_285_residues AHNQNKPNSSVARSNNRYILMGLLTLCGAQLGQAAEIKIGVSLSIPPYVIQETNSGLELELLNQALAVKGHTASIHYLPL ARTFHELREGKLDGIINIKDGMIDNVFYSNVAITYQNCAISLEANHFTINNINDLNNKQVVSFQRASSLLGEEFARMAKA NSGYQEQARQVQQVYMLMKHRADVVVMDKNIFKYYLKQAYLEGKLTEKDSTQQAICHQIFPPTEYKFAFLSEQIRDDFNA GLKQITQDGSLVALQEKYRRLMSFENEAEVSNKLTEPKIIKNDSY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32361; Mature: 32230
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: PS00063 ALDOKETO_REDUCTASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHNQNKPNSSVARSNNRYILMGLLTLCGAQLGQAAEIKIGVSLSIPPYVIQETNSGLEL CCCCCCCCCCHHHHCCCCEEHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEECCCCCCCH ELLNQALAVKGHTASIHYLPLARTFHELREGKLDGIINIKDGMIDNVFYSNVAITYQNCA HHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHCCEEEEEEEEE ISLEANHFTINNINDLNNKQVVSFQRASSLLGEEFARMAKANSGYQEQARQVQQVYMLMK EEEECCEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH HRADVVVMDKNIFKYYLKQAYLEGKLTEKDSTQQAICHQIFPPTEYKFAFLSEQIRDDFN CCCCEEEECHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH AGLKQITQDGSLVALQEKYRRLMSFENEAEVSNKLTEPKIIKNDSY HHHHHHHCCCCEEEHHHHHHHHHCCCCHHHHHHCCCCCEEECCCCC >Mature Secondary Structure AHNQNKPNSSVARSNNRYILMGLLTLCGAQLGQAAEIKIGVSLSIPPYVIQETNSGLEL CCCCCCCCCHHHHCCCCEEHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEECCCCCCCH ELLNQALAVKGHTASIHYLPLARTFHELREGKLDGIINIKDGMIDNVFYSNVAITYQNCA HHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHCCEEEEEEEEE ISLEANHFTINNINDLNNKQVVSFQRASSLLGEEFARMAKANSGYQEQARQVQQVYMLMK EEEECCEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH HRADVVVMDKNIFKYYLKQAYLEGKLTEKDSTQQAICHQIFPPTEYKFAFLSEQIRDDFN CCCCEEEECHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH AGLKQITQDGSLVALQEKYRRLMSFENEAEVSNKLTEPKIIKNDSY HHHHHHHCCCCEEEHHHHHHHHHCCCCHHHHHHCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA