Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160873380
Identifier: 160873380
GI number: 160873380
Start: 293958
End: 294464
Strand: Direct
Name: 160873380
Synonym: Sbal195_0254
Alternate gene names: NA
Gene position: 293958-294464 (Clockwise)
Preceding gene: 160873379
Following gene: 160873381
Centisome position: 5.5
GC content: 48.52
Gene sequence:
>507_bases ATGAAACACAATATTACTATCTTATTATTGATGATTGCGGCATTGAGTATGTCGGTCGTGATGGGCGCAGGTTCGGCTCA GGCATCCGCAACTGTCAGCCAAGCGGACGAGCCCGATACCGCACAAGTACAAGTGCTGGTGGACTATTTTTTTGCTGCCG CGCGTACTGGCGATATCACAGTGCTTGAGCATTTTCTCGATGCGGGCTTCCCTATTGACCAGAGAAATAGTCAATCCTAT ACCGCGCTAATGGTGGCGGCTTATAACGGCCAAGAGGCTGCAACAGATGTATTACTTGAGCATGGTGCTAATGCTTGTTT GCAAGATAAGCGTGGTAATACGGCAATCATGGGCGCTGTAATTAAGGCCGAATTCAATATCGTAAAGCGGCTATACGCGA AAGAATGTGATGCGAACCTAACGAATAATGCCGGAATGACCTTGGTTGAGTTTGCCCGCTACTGGGGTCAAAGTGGCGCT TTGCAGCAGGCGAGTTTGAAGCCATAA
Upstream 100 bases:
>100_bases GTAATCAAGCTCTTTTCTGCCCAGTTTAAGAGGGCGTCTTGCGGGCATTTCGTCACCTCTTATTGTTTAAATCTCTATTT TTGCTGCGCGGGAGTTATTG
Downstream 100 bases:
>100_bases AGGCATCATTTTTTGCCATCTTTTGCGCTCGATCACTCTGGGCCATTCTCTTTAATCTGTTTAGATCTCAGCGTTTACTA TTAGCCATAAGTCTGCTTGT
Product: ankyrin
Products: NA
Alternate protein names: Ankyrin Repeat-Containing Protein; AnkB Protein; Ankyrin-Like Protein; Ankyrin Domain-Containing Protein; Ankyrin Repeat Protein; Ankyrin Domain Protein; Ankyrin Repeat-Containing Exported Protein; Ankyrin Protein; AnkB Protein Involved In Protection Against Oxygen; Secreted Protein
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MKHNITILLLMIAALSMSVVMGAGSAQASATVSQADEPDTAQVQVLVDYFFAAARTGDITVLEHFLDAGFPIDQRNSQSY TALMVAAYNGQEAATDVLLEHGANACLQDKRGNTAIMGAVIKAEFNIVKRLYAKECDANLTNNAGMTLVEFARYWGQSGA LQQASLKP
Sequences:
>Translated_168_residues MKHNITILLLMIAALSMSVVMGAGSAQASATVSQADEPDTAQVQVLVDYFFAAARTGDITVLEHFLDAGFPIDQRNSQSY TALMVAAYNGQEAATDVLLEHGANACLQDKRGNTAIMGAVIKAEFNIVKRLYAKECDANLTNNAGMTLVEFARYWGQSGA LQQASLKP >Mature_168_residues MKHNITILLLMIAALSMSVVMGAGSAQASATVSQADEPDTAQVQVLVDYFFAAARTGDITVLEHFLDAGFPIDQRNSQSY TALMVAAYNGQEAATDVLLEHGANACLQDKRGNTAIMGAVIKAEFNIVKRLYAKECDANLTNNAGMTLVEFARYWGQSGA LQQASLKP
Specific function: Unknown
COG id: COG0666
COG function: function code R; FOG: Ankyrin repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17975; Mature: 17975
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHNITILLLMIAALSMSVVMGAGSAQASATVSQADEPDTAQVQVLVDYFFAAARTGDIT CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHH VLEHFLDAGFPIDQRNSQSYTALMVAAYNGQEAATDVLLEHGANACLQDKRGNTAIMGAV HHHHHHHCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHCCCCHHHCCCCCEEEHHHH IKAEFNIVKRLYAKECDANLTNNAGMTLVEFARYWGQSGALQQASLKP HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKHNITILLLMIAALSMSVVMGAGSAQASATVSQADEPDTAQVQVLVDYFFAAARTGDIT CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHH VLEHFLDAGFPIDQRNSQSYTALMVAAYNGQEAATDVLLEHGANACLQDKRGNTAIMGAV HHHHHHHCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHCCCCHHHCCCCCEEEHHHH IKAEFNIVKRLYAKECDANLTNNAGMTLVEFARYWGQSGALQQASLKP HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA