Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is katE [C]
Identifier: 160873379
GI number: 160873379
Start: 292266
End: 293786
Strand: Direct
Name: katE [C]
Synonym: Sbal195_0253
Alternate gene names: 160873379
Gene position: 292266-293786 (Clockwise)
Preceding gene: 160873378
Following gene: 160873380
Centisome position: 5.47
GC content: 45.89
Gene sequence:
>1521_bases ATGCATCTGACTAAAAGCCTTTTAATTATTTCTATGGGTCTGGCATTAAATGTACAGGCTCAAACTTTACCAACAAATAC CCTGACACGTGACAATGGCGCCCCTGTGGGTGATAACCAAAACTCGACCACAGCGGGCAGTAATGGCAGCGTGTTATTGC AAGATGTGCAGCTTATTCAGAAGCTACAACGCTTTGCCCGTGAACGTATTCCTGAGCGGGTTGTTCACGCCAGAGGCACA GGTGTGCACGGTGAGTTTGTATCGAGTGGTGATTTTAGTTATCTGACTCAAGCGGCACCCTTTGCACAGAAAGGCAAAGT CACGCCTGTGTTTGTGCGTTTTTCTACTGTTATCCACTCGAAAGGTTCGCCAGAAACGCTGCGCGACCCCCGTGGATTTG CGACCAAATTTTATTCGGACCAAGGTAACTGGGACTTAGTGGGTAATAACTTACCCATATTCTTTATTCGCGATGCGATC AAGTTTCCAGACATGGTGCATTCGCTCAAACCATCGCCTGTGACCAATATGCAAGATCCGAATCGTTTTTTCGATTTTTT TAGCCACGAAGCGGGCTCGACCCATATGTTGACTCAGGTTTACAGTAACTTAGGTGTACCTGCCAGTTATCGTGAAATGG ACGGTTGGGGCGTGCATGCTTACAAGTTTATTAACCAAGACAAGCAAGTGAAATACGTTAAGTTTCACTGGAAGAGTCAG CAAGGTGTAAAAGGCTTGCGCCCTGATGAAGTGGTTAAGGTACAAGGTCAAAACTTTAATCATTTGACCGATGATCTCTA TGGCGAGATCAATAAAGGTAATTTCCCTAAATGGGATTTATACGTCCAATTACTCGACCCAAGTGAGCTGAATAAGTTTG ATTACAACCCGTTAGATGCCACTAAAGTATGGCCAAATGTGCCTGAACAAAAAGTCGGTACTATGACGCTTAATCGCATG CCAGCAAACTTCTTTCAAGAAACTGAACAAGCGGCATTTGCGCCATCGAATTTGATCCCTGGGATTGAGCCTTCGGAAGA CAGATTATTGCAAGGTCGTATGTTCTCCTACGCCGATACTCAACTGTATCGACTCGGCGCGAATTTGTCGCAATTGCCGA TTAATAAACCCATAGTGGCGGTGGCAAATCATAACCAAGAAGGCGCGGGCAATATGGGGCATACCCAGTCCGATGTGAAT TATCAACCGAGCGTACATTTAGCCTTGGCCGAAGATAATCGTTATCGTGCGGTAACGACTGCGCTCAGTGGCACAGTGCA ACAAACGGCTATTAGCAAGCAGGATAACTTTAGCCAAGCGGGCGTTTTTTACCGCAGCTTGAGCAAGCAAGATAGAGCAG ATCTGATCACTAACTTGGCCGGTGACTTAGGCAAAGTGAACGATGCTAAGGTGAAACATCAAATGCTGAGTCACTTTTAT CGTGCAGACCCAGAGTTTGGTGAGCGCTTAACCAAGGCCGTAAAAGGTGATTTGGCCGACGTTAAACAGCGTTCAATTTA A
Upstream 100 bases:
>100_bases TCATATAATCGATAAAGATCCTTTCTTTTAATTATAAATTCAGAACTATACTGCGGGCAGGCAGAAAAGAGCTTGGCGTT ATGCATAGAGAGGAACTGTT
Downstream 100 bases:
>100_bases CGCATCATTTTAGAGCGATTTGGTGCAGATATTCGCGTTAAACCGCTCAAACCCAGTAAGTCCCGCAAGGCGTAATCAAG CTCTTTTCTGCCCAGTTTAA
Product: catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 506; Mature: 506
Protein sequence:
>506_residues MHLTKSLLIISMGLALNVQAQTLPTNTLTRDNGAPVGDNQNSTTAGSNGSVLLQDVQLIQKLQRFARERIPERVVHARGT GVHGEFVSSGDFSYLTQAAPFAQKGKVTPVFVRFSTVIHSKGSPETLRDPRGFATKFYSDQGNWDLVGNNLPIFFIRDAI KFPDMVHSLKPSPVTNMQDPNRFFDFFSHEAGSTHMLTQVYSNLGVPASYREMDGWGVHAYKFINQDKQVKYVKFHWKSQ QGVKGLRPDEVVKVQGQNFNHLTDDLYGEINKGNFPKWDLYVQLLDPSELNKFDYNPLDATKVWPNVPEQKVGTMTLNRM PANFFQETEQAAFAPSNLIPGIEPSEDRLLQGRMFSYADTQLYRLGANLSQLPINKPIVAVANHNQEGAGNMGHTQSDVN YQPSVHLALAEDNRYRAVTTALSGTVQQTAISKQDNFSQAGVFYRSLSKQDRADLITNLAGDLGKVNDAKVKHQMLSHFY RADPEFGERLTKAVKGDLADVKQRSI
Sequences:
>Translated_506_residues MHLTKSLLIISMGLALNVQAQTLPTNTLTRDNGAPVGDNQNSTTAGSNGSVLLQDVQLIQKLQRFARERIPERVVHARGT GVHGEFVSSGDFSYLTQAAPFAQKGKVTPVFVRFSTVIHSKGSPETLRDPRGFATKFYSDQGNWDLVGNNLPIFFIRDAI KFPDMVHSLKPSPVTNMQDPNRFFDFFSHEAGSTHMLTQVYSNLGVPASYREMDGWGVHAYKFINQDKQVKYVKFHWKSQ QGVKGLRPDEVVKVQGQNFNHLTDDLYGEINKGNFPKWDLYVQLLDPSELNKFDYNPLDATKVWPNVPEQKVGTMTLNRM PANFFQETEQAAFAPSNLIPGIEPSEDRLLQGRMFSYADTQLYRLGANLSQLPINKPIVAVANHNQEGAGNMGHTQSDVN YQPSVHLALAEDNRYRAVTTALSGTVQQTAISKQDNFSQAGVFYRSLSKQDRADLITNLAGDLGKVNDAKVKHQMLSHFY RADPEFGERLTKAVKGDLADVKQRSI >Mature_506_residues MHLTKSLLIISMGLALNVQAQTLPTNTLTRDNGAPVGDNQNSTTAGSNGSVLLQDVQLIQKLQRFARERIPERVVHARGT GVHGEFVSSGDFSYLTQAAPFAQKGKVTPVFVRFSTVIHSKGSPETLRDPRGFATKFYSDQGNWDLVGNNLPIFFIRDAI KFPDMVHSLKPSPVTNMQDPNRFFDFFSHEAGSTHMLTQVYSNLGVPASYREMDGWGVHAYKFINQDKQVKYVKFHWKSQ QGVKGLRPDEVVKVQGQNFNHLTDDLYGEINKGNFPKWDLYVQLLDPSELNKFDYNPLDATKVWPNVPEQKVGTMTLNRM PANFFQETEQAAFAPSNLIPGIEPSEDRLLQGRMFSYADTQLYRLGANLSQLPINKPIVAVANHNQEGAGNMGHTQSDVN YQPSVHLALAEDNRYRAVTTALSGTVQQTAISKQDNFSQAGVFYRSLSKQDRADLITNLAGDLGKVNDAKVKHQMLSHFY RADPEFGERLTKAVKGDLADVKQRSI
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=473, Percent_Identity=40.8033826638478, Blast_Score=373, Evalue=1e-103, Organism=Escherichia coli, GI48994891, Length=490, Percent_Identity=38.3673469387755, Blast_Score=339, Evalue=2e-94, Organism=Caenorhabditis elegans, GI25147792, Length=480, Percent_Identity=41.4583333333333, Blast_Score=394, Evalue=1e-110, Organism=Caenorhabditis elegans, GI71998444, Length=485, Percent_Identity=41.2371134020619, Blast_Score=393, Evalue=1e-109, Organism=Caenorhabditis elegans, GI25151141, Length=467, Percent_Identity=41.9700214132762, Blast_Score=392, Evalue=1e-109, Organism=Saccharomyces cerevisiae, GI6320462, Length=488, Percent_Identity=37.5, Blast_Score=310, Evalue=4e-85, Organism=Saccharomyces cerevisiae, GI6321525, Length=336, Percent_Identity=43.1547619047619, Blast_Score=290, Evalue=5e-79, Organism=Drosophila melanogaster, GI17981717, Length=483, Percent_Identity=40.3726708074534, Blast_Score=370, Evalue=1e-103, Organism=Drosophila melanogaster, GI19920968, Length=475, Percent_Identity=38.5263157894737, Blast_Score=353, Evalue=2e-97,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 56550; Mature: 56550
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: PS00437 CATALASE_1 ; PS00438 CATALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLTKSLLIISMGLALNVQAQTLPTNTLTRDNGAPVGDNQNSTTAGSNGSVLLQDVQLIQ CCCHHHHHHHEECCEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH KLQRFARERIPERVVHARGTGVHGEFVSSGDFSYLTQAAPFAQKGKVTPVFVRFSTVIHS HHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHCCCCHHCCCCCEEEEEEEHHHHC KGSPETLRDPRGFATKFYSDQGNWDLVGNNLPIFFIRDAIKFPDMVHSLKPSPVTNMQDP CCCCHHHCCCCCHHHHEECCCCCEEEECCCCCEEEEECHHHHHHHHHHCCCCCCCCCCCH NRFFDFFSHEAGSTHMLTQVYSNLGVPASYREMDGWGVHAYKFINQDKQVKYVKFHWKSQ HHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHCCCCCEEEEEEEECCC QGVKGLRPDEVVKVQGQNFNHLTDDLYGEINKGNFPKWDLYVQLLDPSELNKFDYNPLDA CCCCCCCCCCEEEECCCCCCCCCHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCC TKVWPNVPEQKVGTMTLNRMPANFFQETEQAAFAPSNLIPGIEPSEDRLLQGRMFSYADT HHCCCCCCCHHHCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCHHHHHHH QLYRLGANLSQLPINKPIVAVANHNQEGAGNMGHTQSDVNYQPSVHLALAEDNRYRAVTT HHHHHCCCHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEHH ALSGTVQQTAISKQDNFSQAGVFYRSLSKQDRADLITNLAGDLGKVNDAKVKHQMLSHFY HHHCHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH RADPEFGERLTKAVKGDLADVKQRSI HCCHHHHHHHHHHHHCCHHHHHHCCC >Mature Secondary Structure MHLTKSLLIISMGLALNVQAQTLPTNTLTRDNGAPVGDNQNSTTAGSNGSVLLQDVQLIQ CCCHHHHHHHEECCEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH KLQRFARERIPERVVHARGTGVHGEFVSSGDFSYLTQAAPFAQKGKVTPVFVRFSTVIHS HHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHCCCCHHCCCCCEEEEEEEHHHHC KGSPETLRDPRGFATKFYSDQGNWDLVGNNLPIFFIRDAIKFPDMVHSLKPSPVTNMQDP CCCCHHHCCCCCHHHHEECCCCCEEEECCCCCEEEEECHHHHHHHHHHCCCCCCCCCCCH NRFFDFFSHEAGSTHMLTQVYSNLGVPASYREMDGWGVHAYKFINQDKQVKYVKFHWKSQ HHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHCCCCCEEEEEEEECCC QGVKGLRPDEVVKVQGQNFNHLTDDLYGEINKGNFPKWDLYVQLLDPSELNKFDYNPLDA CCCCCCCCCCEEEECCCCCCCCCHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCC TKVWPNVPEQKVGTMTLNRMPANFFQETEQAAFAPSNLIPGIEPSEDRLLQGRMFSYADT HHCCCCCCCHHHCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCHHHHHHH QLYRLGANLSQLPINKPIVAVANHNQEGAGNMGHTQSDVNYQPSVHLALAEDNRYRAVTT HHHHHCCCHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEHH ALSGTVQQTAISKQDNFSQAGVFYRSLSKQDRADLITNLAGDLGKVNDAKVKHQMLSHFY HHHCHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH RADPEFGERLTKAVKGDLADVKQRSI HCCHHHHHHHHHHHHCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]