Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160873373
Identifier: 160873373
GI number: 160873373
Start: 285052
End: 285516
Strand: Direct
Name: 160873373
Synonym: Sbal195_0247
Alternate gene names: NA
Gene position: 285052-285516 (Clockwise)
Preceding gene: 160873365
Following gene: 160873374
Centisome position: 5.33
GC content: 46.67
Gene sequence:
>465_bases ATGTCTACCGCCGTTATTCGCGCTTTCATCAGCCGCAATCCGAGTCGTAAATCCTTTTTTATTTATGCCGTTTTATTATT TTTGACTGAAGTCTTAATCGCTTTATATGCGCCTGCGGGTTTTATCCGTGGTTTTGTGGGCGATGTATTGGTGGTGATCT TGCTGTTTTGCATGGCGCGCGTTGTCGTTCCTGTCACCCATCCGGTAGAAAATACCGCAGCAAAAAACACCGGCGATGGC ATTAAGCGCTTATTTCAAACTCCTTGGCTGGCGTTTGCGGTATTGCTGTTTGCCTTTGCTATCGAGTTTGGTCAGTATTG GGGTTTAGTCGACAAGTTAGGCTTGGGCGGAAATCGCTTGGCGCGGATAGTGATAGGTAGCCATTTTGATCCACTCGATC TCGTGGCATATTTTGTCGGTTACTTGATCTTATTGGGCTGTTATTGGAAAAGCCGCCAGTCCTAG
Upstream 100 bases:
>100_bases TAGGTGGGGAGCCTTAAATGTCAACGAAAACTCGCTTGTTAACCTATTGGTATTACGGTAGATTCTGCCACCTCAACCGA GTGAAGGGATTAACATATCT
Downstream 100 bases:
>100_bases TGATTTGAATCCGCAAGAGTCACGCGACATGTGTGTTCGCGGACAGGCGAGATAAGTGGGGTAAGGGATGCAACCGATAA CGGCATTTTCACTGCTAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSTAVIRAFISRNPSRKSFFIYAVLLFLTEVLIALYAPAGFIRGFVGDVLVVILLFCMARVVVPVTHPVENTAAKNTGDG IKRLFQTPWLAFAVLLFAFAIEFGQYWGLVDKLGLGGNRLARIVIGSHFDPLDLVAYFVGYLILLGCYWKSRQS
Sequences:
>Translated_154_residues MSTAVIRAFISRNPSRKSFFIYAVLLFLTEVLIALYAPAGFIRGFVGDVLVVILLFCMARVVVPVTHPVENTAAKNTGDG IKRLFQTPWLAFAVLLFAFAIEFGQYWGLVDKLGLGGNRLARIVIGSHFDPLDLVAYFVGYLILLGCYWKSRQS >Mature_153_residues STAVIRAFISRNPSRKSFFIYAVLLFLTEVLIALYAPAGFIRGFVGDVLVVILLFCMARVVVPVTHPVENTAAKNTGDGI KRLFQTPWLAFAVLLFAFAIEFGQYWGLVDKLGLGGNRLARIVIGSHFDPLDLVAYFVGYLILLGCYWKSRQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17123; Mature: 16991
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTAVIRAFISRNPSRKSFFIYAVLLFLTEVLIALYAPAGFIRGFVGDVLVVILLFCMAR CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VVVPVTHPVENTAAKNTGDGIKRLFQTPWLAFAVLLFAFAIEFGQYWGLVDKLGLGGNRL HHHHCCCCCHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH ARIVIGSHFDPLDLVAYFVGYLILLGCYWKSRQS HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure STAVIRAFISRNPSRKSFFIYAVLLFLTEVLIALYAPAGFIRGFVGDVLVVILLFCMAR CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VVVPVTHPVENTAAKNTGDGIKRLFQTPWLAFAVLLFAFAIEFGQYWGLVDKLGLGGNRL HHHHCCCCCHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH ARIVIGSHFDPLDLVAYFVGYLILLGCYWKSRQS HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA