Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is 160873374

Identifier: 160873374

GI number: 160873374

Start: 285584

End: 286087

Strand: Direct

Name: 160873374

Synonym: Sbal195_0248

Alternate gene names: NA

Gene position: 285584-286087 (Clockwise)

Preceding gene: 160873373

Following gene: 160873376

Centisome position: 5.34

GC content: 46.03

Gene sequence:

>504_bases
ATGCAACCGATAACGGCATTTTCACTGCTAACAGCACGTACTAATGGACTTGAGCTTAACCCACTGAAAATGCCTTTGTA
TTTCAATGGCCAACATACTCATACCTTTATTGCTGGCCTAGTGATTGAAGGCCAATACCGCTGCGTTTTACCCAATAAAA
CCTCGGGGTATTTGGTCATTACTTCTTTTGATTGTCCCTTCGAAGAATCAACCGAGTTTAGTCTGCTTGATGAAGCGTTT
AAGCTCATTGCGACGACATCTTTGGCGCAAATGTATGATTCATTTTTACTGCACTCACACTGGCCCATAGCCGATAACCG
CTTGCGACTGCACTATTACGGTCAGTTTGTGCTGGATTTAGTCATTACTGCGGGCAGCTCTTGGTTAACGGCGCGGCCGA
AACTTAAGCTGATTGAAGTTGTTGATCCCCAAAGCGATCCGCAAACGGCCGCCGCTATGGCCGAATTGGATCAGCGTTTA
GCAGCCATCGAAAAGTCCCTTTAA

Upstream 100 bases:

>100_bases
TTGGGCTGTTATTGGAAAAGCCGCCAGTCCTAGTGATTTGAATCCGCAAGAGTCACGCGACATGTGTGTTCGCGGACAGG
CGAGATAAGTGGGGTAAGGG

Downstream 100 bases:

>100_bases
TGTGGGATTAAAAACGGCGTCATCTGCTGATTTAACCATGCCATAAAGACTTGCAGGCGTTTGGATAAGTGCCGCCTGTG
TGGGTAGAGCAAGCTTACTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MQPITAFSLLTARTNGLELNPLKMPLYFNGQHTHTFIAGLVIEGQYRCVLPNKTSGYLVITSFDCPFEESTEFSLLDEAF
KLIATTSLAQMYDSFLLHSHWPIADNRLRLHYYGQFVLDLVITAGSSWLTARPKLKLIEVVDPQSDPQTAAAMAELDQRL
AAIEKSL

Sequences:

>Translated_167_residues
MQPITAFSLLTARTNGLELNPLKMPLYFNGQHTHTFIAGLVIEGQYRCVLPNKTSGYLVITSFDCPFEESTEFSLLDEAF
KLIATTSLAQMYDSFLLHSHWPIADNRLRLHYYGQFVLDLVITAGSSWLTARPKLKLIEVVDPQSDPQTAAAMAELDQRL
AAIEKSL
>Mature_167_residues
MQPITAFSLLTARTNGLELNPLKMPLYFNGQHTHTFIAGLVIEGQYRCVLPNKTSGYLVITSFDCPFEESTEFSLLDEAF
KLIATTSLAQMYDSFLLHSHWPIADNRLRLHYYGQFVLDLVITAGSSWLTARPKLKLIEVVDPQSDPQTAAAMAELDQRL
AAIEKSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18736; Mature: 18736

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPITAFSLLTARTNGLELNPLKMPLYFNGQHTHTFIAGLVIEGQYRCVLPNKTSGYLVI
CCCCHHHHEEEECCCCEEECCEEEEEEECCCCCEEEEEEEEECCCEEEECCCCCCCEEEE
TSFDCPFEESTEFSLLDEAFKLIATTSLAQMYDSFLLHSHWPIADNRLRLHYYGQFVLDL
EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHH
VITAGSSWLTARPKLKLIEVVDPQSDPQTAAAMAELDQRLAAIEKSL
HHHCCCCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQPITAFSLLTARTNGLELNPLKMPLYFNGQHTHTFIAGLVIEGQYRCVLPNKTSGYLVI
CCCCHHHHEEEECCCCEEECCEEEEEEECCCCCEEEEEEEEECCCEEEECCCCCCCEEEE
TSFDCPFEESTEFSLLDEAFKLIATTSLAQMYDSFLLHSHWPIADNRLRLHYYGQFVLDL
EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHH
VITAGSSWLTARPKLKLIEVVDPQSDPQTAAAMAELDQRLAAIEKSL
HHHCCCCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA