Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is murI [H]
Identifier: 160873307
GI number: 160873307
Start: 219578
End: 220402
Strand: Direct
Name: murI [H]
Synonym: Sbal195_0181
Alternate gene names: 160873307
Gene position: 219578-220402 (Clockwise)
Preceding gene: 160873305
Following gene: 160873309
Centisome position: 4.11
GC content: 46.79
Gene sequence:
>825_bases TTGTCGCGACCTATATTAGTGTTTGATTCTGGGATTGGTGGCCTATCCGTATTGGCTGAAATCCGCAAGAGTTTGCCCCA TAGCGACTATTGTTATCTTTTCGACAATGCGAGGTTGCCCTATGGCGAGTTAGAAGAGCAGGTATTAATTGCTGGCTGTG TCGCATTAGTATGTGATCTTGTGGCTCGCACCAATGCAATGATAGTCGTTGTCGCCTGCAATACCGCGAGCACTGTTGTG CTACCGGCATTACGTGCAAACCTCAGTATTCCTGTTGTGGGCGTTGTACCCGCTATCAAACCTGCGGCACAGATGTCTAA GAGTAAACGTATTGGACTCTTGGCCACACCAGGCACAGTTAAGCGTCATTATACCCATGAGCTCATCAGTCAATTTGCCG ATGATTGCCATGTCGAACTTTTTGGTTGTTCTGAACTTGTCATGATGGCGGAGCAGAAAATAGCGACAGGTGAAATGGAC ATGCACAGACTGGCAGATTTACTCGCGCCAGTCGTTGCCGCGCAATTGGACGTGCTCGTACTGGGTTGTACTCACTTCCC TATGATCCAAGCTGAATTACAACAAGTGCTCGGTGCGGGCGTAACGCTAATGGATTCTGGCGCTGCGATAGCTAAGCGAG TCGTGACTCTTTTAACGCAACAAAATCTTATTGTGGAACAGCGCAGAGTAACAAATGAGAGAGAAGCATTAGGGCAGTCA GTAATGCAGGCGTTCTATACTAAAGCGGAAATCAGTGAAGGTTTAACAACAACATTAATTGATTGTGGCTTTTCAACTAT CGAACGAATCACCACAACCAACTAA
Upstream 100 bases:
>100_bases GGAGTCATTCAATCATCAATCATCAAACATCGAATCAGTTAATGTTGTAATGCGTTCAATCTGTATAGCCATTTTGTTAT AACCGAAACGGGAGACCCGC
Downstream 100 bases:
>100_bases ATTTACAACGTCAAACAAAACAGTTTAAACGGTAATGCTACTCGTCAGTACCAGTACGGTCGGCAGCTTCCGAATCTTGT GTTTTTGCTTCTCTTACTTT
Product: glutamate racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MSRPILVFDSGIGGLSVLAEIRKSLPHSDYCYLFDNARLPYGELEEQVLIAGCVALVCDLVARTNAMIVVVACNTASTVV LPALRANLSIPVVGVVPAIKPAAQMSKSKRIGLLATPGTVKRHYTHELISQFADDCHVELFGCSELVMMAEQKIATGEMD MHRLADLLAPVVAAQLDVLVLGCTHFPMIQAELQQVLGAGVTLMDSGAAIAKRVVTLLTQQNLIVEQRRVTNEREALGQS VMQAFYTKAEISEGLTTTLIDCGFSTIERITTTN
Sequences:
>Translated_274_residues MSRPILVFDSGIGGLSVLAEIRKSLPHSDYCYLFDNARLPYGELEEQVLIAGCVALVCDLVARTNAMIVVVACNTASTVV LPALRANLSIPVVGVVPAIKPAAQMSKSKRIGLLATPGTVKRHYTHELISQFADDCHVELFGCSELVMMAEQKIATGEMD MHRLADLLAPVVAAQLDVLVLGCTHFPMIQAELQQVLGAGVTLMDSGAAIAKRVVTLLTQQNLIVEQRRVTNEREALGQS VMQAFYTKAEISEGLTTTLIDCGFSTIERITTTN >Mature_273_residues SRPILVFDSGIGGLSVLAEIRKSLPHSDYCYLFDNARLPYGELEEQVLIAGCVALVCDLVARTNAMIVVVACNTASTVVL PALRANLSIPVVGVVPAIKPAAQMSKSKRIGLLATPGTVKRHYTHELISQFADDCHVELFGCSELVMMAEQKIATGEMDM HRLADLLAPVVAAQLDVLVLGCTHFPMIQAELQQVLGAGVTLMDSGAAIAKRVVTLLTQQNLIVEQRRVTNEREALGQSV MQAFYTKAEISEGLTTTLIDCGFSTIERITTTN
Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]
COG id: COG0796
COG function: function code M; Glutamate racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate/glutamate racemases family [H]
Homologues:
Organism=Escherichia coli, GI87082355, Length=222, Percent_Identity=52.2522522522522, Blast_Score=209, Evalue=1e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 - InterPro: IPR001920 - InterPro: IPR018187 - InterPro: IPR004391 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.1.3 [H]
Molecular weight: Translated: 29540; Mature: 29409
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS00923 ASP_GLU_RACEMASE_1 ; PS00924 ASP_GLU_RACEMASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPILVFDSGIGGLSVLAEIRKSLPHSDYCYLFDNARLPYGELEEQVLIAGCVALVCDL CCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH VARTNAMIVVVACNTASTVVLPALRANLSIPVVGVVPAIKPAAQMSKSKRIGLLATPGTV HHCCCCEEEEEEECCCCHHHHHHHHCCCCCCEEECCCCCCHHHHHHHCCCCEEEECCCHH KRHYTHELISQFADDCHVELFGCSELVMMAEQKIATGEMDMHRLADLLAPVVAAQLDVLV HHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHE LGCTHFPMIQAELQQVLGAGVTLMDSGAAIAKRVVTLLTQQNLIVEQRRVTNEREALGQS ECCCCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH VMQAFYTKAEISEGLTTTLIDCGFSTIERITTTN HHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHCCC >Mature Secondary Structure SRPILVFDSGIGGLSVLAEIRKSLPHSDYCYLFDNARLPYGELEEQVLIAGCVALVCDL CCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH VARTNAMIVVVACNTASTVVLPALRANLSIPVVGVVPAIKPAAQMSKSKRIGLLATPGTV HHCCCCEEEEEEECCCCHHHHHHHHCCCCCCEEECCCCCCHHHHHHHCCCCEEEECCCHH KRHYTHELISQFADDCHVELFGCSELVMMAEQKIATGEMDMHRLADLLAPVVAAQLDVLV HHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHE LGCTHFPMIQAELQQVLGAGVTLMDSGAAIAKRVVTLLTQQNLIVEQRRVTNEREALGQS ECCCCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH VMQAFYTKAEISEGLTTTLIDCGFSTIERITTTN HHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA