Click here to switch to the map view.

The map label for this gene is 160873292

Identifier: 160873292

GI number: 160873292

Start: 193287

End: 195344

Strand: Direct

Name: 160873292

Synonym: Sbal195_0166

Alternate gene names: NA

Gene position: 193287-195344 (Clockwise)

Preceding gene: 160873291

Following gene: 160873293

Centisome position: 3.61

GC content: 47.38

Gene sequence:

>2058_bases
ATGCTGCAAAGTTCAGAACGTGAATTAGAACAGAGTTTGGATGTCGTCGCGTTAACTCAGTTTGCTAACGTGCTATTGCT
GTCAACCTCGGCAGGGGAGTCTAAACGGTTAATCGATCCCATATTGGAGCAGTTATGCCAAATAACCGCGGTGAAATTGC
ACCCTGAGTATTTTTTGGATACTGAGGCGAGTATTACGCCTTTTGGTAAGGCTGTTTCGCTCACTACTGCGGCGCAGTGT
GCTGAAGATCCTGAGCGTGGGCGAGTGTTTATTCAGGGCATTTATCAGGCCATACAGGATAAGTTGGCGTTAAATCCGCA
ACGGCCAATACAGATTTTGTATGCGGGTACAGGACCTTTTGCCTGGTTGTTATTACCATTACTGCCGCTGTTTTCTGCCA
GTCAGATTCAAGTCACCTTGCTCGACATTCACCCTGCCTCGTTAGATAAAGTCACCAAGCTTATTGAATACTTTGATTTA
GCAGATCGTGTGGCAATGTATGTCTGCGCCGACGCCACAGTTTGGCAACCAGAAGCTGCAGTAAAGTTCGATATGATAGT
CTCTGAAACCATGAAGCATCTGCTGCAACAGGAGCCTCAAGTCCAGATATTCAGCCACTTACTGGCGTATCTTGCGGATG
GCGGCGTGCTGATTCCGCAAAACATTGAGCTAGACGCTTGGCTTGAGTGTCGTACTGTGCAGGATTTTGTGGAGACGCAT
TATTTAGGGCCTTTGTTTGCACTCAACCTGCAAACTGCGCGCTTACTTGCCGATGGAGATCGTAGCTTCTTGGCTGGTAC
TTTACTGCTCCCCGATTTCAGCCCGAGTGCGGTAACGCTTAAGTTCACGACTTCCATTCAAGTCTATGGTCATTCCACGC
TGAGCGAAAACCAATCCCAACTCACCTTACCTCGATATCGACGCGAGCATTGGCTTAAGCCTCTCTCATGCCTTGCTTTT
CGATATGAGCAGGGCGCTCATCCCGATTTTGTTTTTGATGTTATAGAGCAAAAACCAGTGCTGGTGTCGAGTGACGATCT
GAGCTGCTTAGGCATTTATCACTTGCAGCGACTCTGGCAAAAGATACAGCTACGCAAACGGGGAGAGTCATACACTGAAC
TGGCAAATGAATGGCACTTAGATAAAACCTTGCTGGATCTTTGTGGAATAGGGCTAGAGCCGGGTCTAAGAGCTTTATAT
CAAAACGATCATCAGTCAGCTTTTGTCGCTTTTATTCAGCAAATAGCCAAGCTGACAGCCGCGGATATTGCTGGGATAAA
TCAGCAATTAAGCGCTATTTCCCATGGATTAACGTCATCGGTCACAATGCCAGAAGTCGATGATTTAAATTCAATAGAGG
TTGAAGACTCAAATCCGGCTGCAGTACTCAGCGAGTCACAACTCAATTTTTGGCGTAGTGAAGGCTACTTAGTGATCCCG
CATGTGCTCACAGCAGAGCAATGCGCCGCCACTCGAGATTTTATTTGGCAGCAGTTAGGGGCCAATGAACGAGATCCCAT
CACTTGGTATCAAGCTCATGCGTTTATGCAGAAAATAATGCTGCAACTGTTTCGCCATCCGCAACTGGACGCGAATCGAC
AAGTCCCCAAAATCCGTCAAGTGTTTGAACAGCTATGGCAGCGAACGGATTTAGTCATGACGACCGACAGAGTCAGCTTT
AATCCACCTGAAACGCCAACTTGGCATTTCCCCGGTCCGGATATGCACTGGGATATGCCGCTACGGCTACCCGTTGAGTT
TGGCACTCAAGGGTTAATTTACTTAACCGATACCATTGCGGAACAAGGTGCATTTTGTTGTGTCCCCGGATTTCATCTCA
AGATAGAGGAGTGGCTTCTCGAACAAAACAAAAAGCAAAACAAGACGGATATCGAGCTTCATCAACAGGATTGGAGCAAG
TGGCCTATTAGACCCCTAGCCGCAAATGCAGGTGATTTAATCATTTGGCACCATGCCTTGCCCCATGGCGCAAGCCCGAA
TCGGGCTAAACTACCGCGTATGGTGCAGTACATTAACTTTTATCCTATGGCTTGCTAA

Upstream 100 bases:

>100_bases
AATGCCGACCAAGTCCATTGGGTTGAAAATAAAGGGCAGGATGCGCGGATCAACTTAGTGATTGATTGCGAAGTGAATAC
TTGGTTAAGGGAGTTAATCG

Downstream 100 bases:

>100_bases
TGGTTGATTTTAAAGAACAACAGCAACGCTATTGGCAATTGTTGCATCAACCAGAGTCATTGTTTTTACTGCATCAAGCG
AATGATGTAGAGCATTTTAT

Product: phytanoyl-CoA dioxygenase

Products: NA

Alternate protein names: Phytanoyl-CoA Dioxygenase Family; Phytanoyl-CoA Dioxygenase Superfamily Protein; Phytanoyl-CoA Deoxygenase Family Protein; Phytanoyl-CoA Deoxygenase PhyH Family Protein

Number of amino acids: Translated: 685; Mature: 685

Protein sequence:

>685_residues
MLQSSERELEQSLDVVALTQFANVLLLSTSAGESKRLIDPILEQLCQITAVKLHPEYFLDTEASITPFGKAVSLTTAAQC
AEDPERGRVFIQGIYQAIQDKLALNPQRPIQILYAGTGPFAWLLLPLLPLFSASQIQVTLLDIHPASLDKVTKLIEYFDL
ADRVAMYVCADATVWQPEAAVKFDMIVSETMKHLLQQEPQVQIFSHLLAYLADGGVLIPQNIELDAWLECRTVQDFVETH
YLGPLFALNLQTARLLADGDRSFLAGTLLLPDFSPSAVTLKFTTSIQVYGHSTLSENQSQLTLPRYRREHWLKPLSCLAF
RYEQGAHPDFVFDVIEQKPVLVSSDDLSCLGIYHLQRLWQKIQLRKRGESYTELANEWHLDKTLLDLCGIGLEPGLRALY
QNDHQSAFVAFIQQIAKLTAADIAGINQQLSAISHGLTSSVTMPEVDDLNSIEVEDSNPAAVLSESQLNFWRSEGYLVIP
HVLTAEQCAATRDFIWQQLGANERDPITWYQAHAFMQKIMLQLFRHPQLDANRQVPKIRQVFEQLWQRTDLVMTTDRVSF
NPPETPTWHFPGPDMHWDMPLRLPVEFGTQGLIYLTDTIAEQGAFCCVPGFHLKIEEWLLEQNKKQNKTDIELHQQDWSK
WPIRPLAANAGDLIIWHHALPHGASPNRAKLPRMVQYINFYPMAC

Sequences:

>Translated_685_residues
MLQSSERELEQSLDVVALTQFANVLLLSTSAGESKRLIDPILEQLCQITAVKLHPEYFLDTEASITPFGKAVSLTTAAQC
AEDPERGRVFIQGIYQAIQDKLALNPQRPIQILYAGTGPFAWLLLPLLPLFSASQIQVTLLDIHPASLDKVTKLIEYFDL
ADRVAMYVCADATVWQPEAAVKFDMIVSETMKHLLQQEPQVQIFSHLLAYLADGGVLIPQNIELDAWLECRTVQDFVETH
YLGPLFALNLQTARLLADGDRSFLAGTLLLPDFSPSAVTLKFTTSIQVYGHSTLSENQSQLTLPRYRREHWLKPLSCLAF
RYEQGAHPDFVFDVIEQKPVLVSSDDLSCLGIYHLQRLWQKIQLRKRGESYTELANEWHLDKTLLDLCGIGLEPGLRALY
QNDHQSAFVAFIQQIAKLTAADIAGINQQLSAISHGLTSSVTMPEVDDLNSIEVEDSNPAAVLSESQLNFWRSEGYLVIP
HVLTAEQCAATRDFIWQQLGANERDPITWYQAHAFMQKIMLQLFRHPQLDANRQVPKIRQVFEQLWQRTDLVMTTDRVSF
NPPETPTWHFPGPDMHWDMPLRLPVEFGTQGLIYLTDTIAEQGAFCCVPGFHLKIEEWLLEQNKKQNKTDIELHQQDWSK
WPIRPLAANAGDLIIWHHALPHGASPNRAKLPRMVQYINFYPMAC
>Mature_685_residues
MLQSSERELEQSLDVVALTQFANVLLLSTSAGESKRLIDPILEQLCQITAVKLHPEYFLDTEASITPFGKAVSLTTAAQC
AEDPERGRVFIQGIYQAIQDKLALNPQRPIQILYAGTGPFAWLLLPLLPLFSASQIQVTLLDIHPASLDKVTKLIEYFDL
ADRVAMYVCADATVWQPEAAVKFDMIVSETMKHLLQQEPQVQIFSHLLAYLADGGVLIPQNIELDAWLECRTVQDFVETH
YLGPLFALNLQTARLLADGDRSFLAGTLLLPDFSPSAVTLKFTTSIQVYGHSTLSENQSQLTLPRYRREHWLKPLSCLAF
RYEQGAHPDFVFDVIEQKPVLVSSDDLSCLGIYHLQRLWQKIQLRKRGESYTELANEWHLDKTLLDLCGIGLEPGLRALY
QNDHQSAFVAFIQQIAKLTAADIAGINQQLSAISHGLTSSVTMPEVDDLNSIEVEDSNPAAVLSESQLNFWRSEGYLVIP
HVLTAEQCAATRDFIWQQLGANERDPITWYQAHAFMQKIMLQLFRHPQLDANRQVPKIRQVFEQLWQRTDLVMTTDRVSF
NPPETPTWHFPGPDMHWDMPLRLPVEFGTQGLIYLTDTIAEQGAFCCVPGFHLKIEEWLLEQNKKQNKTDIELHQQDWSK
WPIRPLAANAGDLIIWHHALPHGASPNRAKLPRMVQYINFYPMAC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77680; Mature: 77680

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQSSERELEQSLDVVALTQFANVLLLSTSAGESKRLIDPILEQLCQITAVKLHPEYFLD
CCCCCHHHHHHHCCHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHEEEECCHHEEC
TEASITPFGKAVSLTTAAQCAEDPERGRVFIQGIYQAIQDKLALNPQRPIQILYAGTGPF
CCCCCCCCCCCEEHHHHHHHCCCHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHH
AWLLLPLLPLFSASQIQVTLLDIHPASLDKVTKLIEYFDLADRVAMYVCADATVWQPEAA
HHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHH
VKFDMIVSETMKHLLQQEPQVQIFSHLLAYLADGGVLIPQNIELDAWLECRTVQDFVETH
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEECCCCCCCCHHEEHHHHHHHHHHH
YLGPLFALNLQTARLLADGDRSFLAGTLLLPDFSPSAVTLKFTTSIQVYGHSTLSENQSQ
CCCCEEEEEHHHHHHEECCCCCCEEEEEECCCCCCCEEEEEEEEEEEEEECCCCCCCCCC
LTLPRYRREHWLKPLSCLAFRYEQGAHPDFVFDVIEQKPVLVSSDDLSCLGIYHLQRLWQ
CCCHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHH
KIQLRKRGESYTELANEWHLDKTLLDLCGIGLEPGLRALYQNDHQSAFVAFIQQIAKLTA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH
ADIAGINQQLSAISHGLTSSVTMPEVDDLNSIEVEDSNPAAVLSESQLNFWRSEGYLVIP
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCEEEECHHHHHHHCCCEEEEC
HVLTAEQCAATRDFIWQQLGANERDPITWYQAHAFMQKIMLQLFRHPQLDANRQVPKIRQ
CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
VFEQLWQRTDLVMTTDRVSFNPPETPTWHFPGPDMHWDMPLRLPVEFGTQGLIYLTDTIA
HHHHHHHHCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCEEEECCCCCCCEEEEEEHHH
EQGAFCCVPGFHLKIEEWLLEQNKKQNKTDIELHQQDWSKWPIRPLAANAGDLIIWHHAL
HCCCEEECCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCEECCCCCCEEEEEECC
PHGASPNRAKLPRMVQYINFYPMAC
CCCCCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLQSSERELEQSLDVVALTQFANVLLLSTSAGESKRLIDPILEQLCQITAVKLHPEYFLD
CCCCCHHHHHHHCCHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHEEEECCHHEEC
TEASITPFGKAVSLTTAAQCAEDPERGRVFIQGIYQAIQDKLALNPQRPIQILYAGTGPF
CCCCCCCCCCCEEHHHHHHHCCCHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHH
AWLLLPLLPLFSASQIQVTLLDIHPASLDKVTKLIEYFDLADRVAMYVCADATVWQPEAA
HHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHH
VKFDMIVSETMKHLLQQEPQVQIFSHLLAYLADGGVLIPQNIELDAWLECRTVQDFVETH
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEECCCCCCCCHHEEHHHHHHHHHHH
YLGPLFALNLQTARLLADGDRSFLAGTLLLPDFSPSAVTLKFTTSIQVYGHSTLSENQSQ
CCCCEEEEEHHHHHHEECCCCCCEEEEEECCCCCCCEEEEEEEEEEEEEECCCCCCCCCC
LTLPRYRREHWLKPLSCLAFRYEQGAHPDFVFDVIEQKPVLVSSDDLSCLGIYHLQRLWQ
CCCHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHH
KIQLRKRGESYTELANEWHLDKTLLDLCGIGLEPGLRALYQNDHQSAFVAFIQQIAKLTA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH
ADIAGINQQLSAISHGLTSSVTMPEVDDLNSIEVEDSNPAAVLSESQLNFWRSEGYLVIP
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCEEEECHHHHHHHCCCEEEEC
HVLTAEQCAATRDFIWQQLGANERDPITWYQAHAFMQKIMLQLFRHPQLDANRQVPKIRQ
CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
VFEQLWQRTDLVMTTDRVSFNPPETPTWHFPGPDMHWDMPLRLPVEFGTQGLIYLTDTIA
HHHHHHHHCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCEEEECCCCCCCEEEEEEHHH
EQGAFCCVPGFHLKIEEWLLEQNKKQNKTDIELHQQDWSKWPIRPLAANAGDLIIWHHAL
HCCCEEECCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCEECCCCCCEEEEEECC
PHGASPNRAKLPRMVQYINFYPMAC
CCCCCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA