Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160873293
Identifier: 160873293
GI number: 160873293
Start: 195344
End: 196504
Strand: Direct
Name: 160873293
Synonym: Sbal195_0167
Alternate gene names: NA
Gene position: 195344-196504 (Clockwise)
Preceding gene: 160873292
Following gene: 160873294
Centisome position: 3.65
GC content: 43.76
Gene sequence:
>1161_bases ATGGTTGATTTTAAAGAACAACAGCAACGCTATTGGCAATTGTTGCATCAACCAGAGTCATTGTTTTTACTGCATCAAGC GAATGATGTAGAGCATTTTATCGCGCTGATGACGGATTTTCTTGCTTGGCCAGAGCTTAATTTAGAACACATGCTCGCAT TTATTGCTTTGCAGCAAGATAGCTTTATTCCAGATTTAGATCGCTTCAGTCAAGCCTGGTTCCCTTGTCGTTATCACTCA CAACATAAAACGGTGAGTTGGGTTCCGGCATTTCATAGGTTATCTAAACCCTTCTTAGAGGACGATATCAGTGATGCTCG TCGTTGTTTACTCGCTAGTTTTATCCAACCTAAAACCTTGCTCGAACCCCTATTATCCCAACGGGAAAGTTTGCCTATCG TAAATCCAAGTTTGATGATTTTTCACTGGTCCCGTTGTGGTTCGACGCTAGTTTCGAGTAGCTTTGCCCTGCTCGAAACT TGCCGAGTGCTCTCTGAATCTATGCTCTGCAGCGATGTTATGCATGATGACCATTGGCCTTTGGCACTAAAGCCTCAGCT CGTCGATTTATGCTTGCGGCTACAGGGGCGATTGAGATTAGGCGAGCGTGAGTTAGTGATCAAGTGGAATGCATGGGATC TGGCCTGCAGGCCCATGTTGCTCGAACTTTACCCTAAGAGCCGAGTGTTATGCTTAATACGCAATCCTAAGGATATTATT GCGTCTCATCAAAGAGTTGCTGGGAGACATATGGCTGGAGGGCAAAGTTTACTTCCAACTGAACTGCATACTCAACAGAT GGAAAATACGGATACTGAGCCTAGCTTAGATGAATTTCGCACCACCGTCTTACTGTATTTAGCGCAATTATCTGTCGCTT CACATCAATCTTCTCGAGTTATTCTACTGGATTATCATCAATTAAAAGATTTTAAACCCACAACATTCTCTACCATCTTA GGATGGCCATTATCTGAAGGTGAGATTCAGCGCTGGCAACACCATTGGCGTTTTGATGCGAAGCAGCAGGGGCAACTATT TACACCTGTTGTGTCAAATGAGCCCGTCCCAATCCGTGAATGTCAAAGCCCATCGTGGCAGCAATTATTAATCACCTATA ACCAACTTTTGCAGCGTTTATATTGGGATAAAAAGGCATGA
Upstream 100 bases:
>100_bases TAATCATTTGGCACCATGCCTTGCCCCATGGCGCAAGCCCGAATCGGGCTAAACTACCGCGTATGGTGCAGTACATTAAC TTTTATCCTATGGCTTGCTA
Downstream 100 bases:
>100_bases TGCGAGGTGAGTTAAATCTACCAATAGGCTTGAGTGTTAAAGCTGCTAATATAACTGACGACCCATTTATGGCACAGCTT TTTTATTCCACAAAAACGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MVDFKEQQQRYWQLLHQPESLFLLHQANDVEHFIALMTDFLAWPELNLEHMLAFIALQQDSFIPDLDRFSQAWFPCRYHS QHKTVSWVPAFHRLSKPFLEDDISDARRCLLASFIQPKTLLEPLLSQRESLPIVNPSLMIFHWSRCGSTLVSSSFALLET CRVLSESMLCSDVMHDDHWPLALKPQLVDLCLRLQGRLRLGERELVIKWNAWDLACRPMLLELYPKSRVLCLIRNPKDII ASHQRVAGRHMAGGQSLLPTELHTQQMENTDTEPSLDEFRTTVLLYLAQLSVASHQSSRVILLDYHQLKDFKPTTFSTIL GWPLSEGEIQRWQHHWRFDAKQQGQLFTPVVSNEPVPIRECQSPSWQQLLITYNQLLQRLYWDKKA
Sequences:
>Translated_386_residues MVDFKEQQQRYWQLLHQPESLFLLHQANDVEHFIALMTDFLAWPELNLEHMLAFIALQQDSFIPDLDRFSQAWFPCRYHS QHKTVSWVPAFHRLSKPFLEDDISDARRCLLASFIQPKTLLEPLLSQRESLPIVNPSLMIFHWSRCGSTLVSSSFALLET CRVLSESMLCSDVMHDDHWPLALKPQLVDLCLRLQGRLRLGERELVIKWNAWDLACRPMLLELYPKSRVLCLIRNPKDII ASHQRVAGRHMAGGQSLLPTELHTQQMENTDTEPSLDEFRTTVLLYLAQLSVASHQSSRVILLDYHQLKDFKPTTFSTIL GWPLSEGEIQRWQHHWRFDAKQQGQLFTPVVSNEPVPIRECQSPSWQQLLITYNQLLQRLYWDKKA >Mature_386_residues MVDFKEQQQRYWQLLHQPESLFLLHQANDVEHFIALMTDFLAWPELNLEHMLAFIALQQDSFIPDLDRFSQAWFPCRYHS QHKTVSWVPAFHRLSKPFLEDDISDARRCLLASFIQPKTLLEPLLSQRESLPIVNPSLMIFHWSRCGSTLVSSSFALLET CRVLSESMLCSDVMHDDHWPLALKPQLVDLCLRLQGRLRLGERELVIKWNAWDLACRPMLLELYPKSRVLCLIRNPKDII ASHQRVAGRHMAGGQSLLPTELHTQQMENTDTEPSLDEFRTTVLLYLAQLSVASHQSSRVILLDYHQLKDFKPTTFSTIL GWPLSEGEIQRWQHHWRFDAKQQGQLFTPVVSNEPVPIRECQSPSWQQLLITYNQLLQRLYWDKKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45170; Mature: 45170
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDFKEQQQRYWQLLHQPESLFLLHQANDVEHFIALMTDFLAWPELNLEHMLAFIALQQD CCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC SFIPDLDRFSQAWFPCRYHSQHKTVSWVPAFHRLSKPFLEDDISDARRCLLASFIQPKTL CCCCCHHHHHHHCCCCEECCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHH LEPLLSQRESLPIVNPSLMIFHWSRCGSTLVSSSFALLETCRVLSESMLCSDVMHDDHWP HHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LALKPQLVDLCLRLQGRLRLGERELVIKWNAWDLACRPMLLELYPKSRVLCLIRNPKDII EEECHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCHHHH ASHQRVAGRHMAGGQSLLPTELHTQQMENTDTEPSLDEFRTTVLLYLAQLSVASHQSSRV HHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE ILLDYHQLKDFKPTTFSTILGWPLSEGEIQRWQHHWRFDAKQQGQLFTPVVSNEPVPIRE EEEEHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCCCCCHHH CQSPSWQQLLITYNQLLQRLYWDKKA CCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVDFKEQQQRYWQLLHQPESLFLLHQANDVEHFIALMTDFLAWPELNLEHMLAFIALQQD CCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC SFIPDLDRFSQAWFPCRYHSQHKTVSWVPAFHRLSKPFLEDDISDARRCLLASFIQPKTL CCCCCHHHHHHHCCCCEECCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHH LEPLLSQRESLPIVNPSLMIFHWSRCGSTLVSSSFALLETCRVLSESMLCSDVMHDDHWP HHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LALKPQLVDLCLRLQGRLRLGERELVIKWNAWDLACRPMLLELYPKSRVLCLIRNPKDII EEECHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCHHHH ASHQRVAGRHMAGGQSLLPTELHTQQMENTDTEPSLDEFRTTVLLYLAQLSVASHQSSRV HHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE ILLDYHQLKDFKPTTFSTILGWPLSEGEIQRWQHHWRFDAKQQGQLFTPVVSNEPVPIRE EEEEHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCCCCCHHH CQSPSWQQLLITYNQLLQRLYWDKKA CCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA