Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is yhgN [H]
Identifier: 160873254
GI number: 160873254
Start: 149863
End: 150456
Strand: Direct
Name: yhgN [H]
Synonym: Sbal195_0128
Alternate gene names: 160873254
Gene position: 149863-150456 (Clockwise)
Preceding gene: 160873251
Following gene: 160873255
Centisome position: 2.8
GC content: 46.63
Gene sequence:
>594_bases ATGGATATATTTTCTGCTGCGGTAATGTTGTTTTTGATCATGGACCCTCTGGGGAATTTGCCGATTTTCGCGTCGATTCT TCGGCATATTGATCCCAAGAAGCGTCGTAAGGTATTGATCCGAGAGTTACTCTTCGCCTTAGTGATCATGCTGTCGTTCC TTTATGCGGGTGAGGCTATCTTAAGTTTCTTAAATCTTCGCTCTGAGTCTGTGAGTATCGCGGGCGGGATTATTCTGTTT CTTATCGCGATTAAAATGATTTTCCCCCAACCCGGTGGTGTCGTTGGATTAGCCGCGGGAGAAGAGCCATTTATCGTACC TATGGCCATTCCCTTGATGGCAGGTCCATCGATTCTTGCCGCTTTGATTCTACTGGCACACACAGATAGCTCACGCATGG GCGATTGGACCATAGCATTAGTGTCTGCTTGGGGGGCAAGCGCAGTGATCTTAATGTTTTATAAACTCTTTACCCGTGTG CTGGGTGAAAAAGGCCTCACTGCGGTTGAGCGTTTGATGGGCATGGTATTGGTCATGATCTCAGTACAAATGTTCCTCGA CGGTATTTCAAATTATCTAAAAACCGCCGGCTAA
Upstream 100 bases:
>100_bases GCCTTGCCTAAAGTGCGTTACATTCCCGCTGAATCCTGCATCTTCAGGTTGTTTGGGTATATAATATGGGCTTATGTTGG CTTGGGTGTTGATACGTTAA
Downstream 100 bases:
>100_bases ATTTAGCTCGCTCGCTTAAAACGAAACCGCATTAACGCTATTAATGCGGTTTTTTTATGGCTGGGATTTGGCTGGAATGC CCTCAGCATAGAGATTTGCT
Product: multiple antibiotic resistance (MarC)-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MDIFSAAVMLFLIMDPLGNLPIFASILRHIDPKKRRKVLIRELLFALVIMLSFLYAGEAILSFLNLRSESVSIAGGIILF LIAIKMIFPQPGGVVGLAAGEEPFIVPMAIPLMAGPSILAALILLAHTDSSRMGDWTIALVSAWGASAVILMFYKLFTRV LGEKGLTAVERLMGMVLVMISVQMFLDGISNYLKTAG
Sequences:
>Translated_197_residues MDIFSAAVMLFLIMDPLGNLPIFASILRHIDPKKRRKVLIRELLFALVIMLSFLYAGEAILSFLNLRSESVSIAGGIILF LIAIKMIFPQPGGVVGLAAGEEPFIVPMAIPLMAGPSILAALILLAHTDSSRMGDWTIALVSAWGASAVILMFYKLFTRV LGEKGLTAVERLMGMVLVMISVQMFLDGISNYLKTAG >Mature_197_residues MDIFSAAVMLFLIMDPLGNLPIFASILRHIDPKKRRKVLIRELLFALVIMLSFLYAGEAILSFLNLRSESVSIAGGIILF LIAIKMIFPQPGGVVGLAAGEEPFIVPMAIPLMAGPSILAALILLAHTDSSRMGDWTIALVSAWGASAVILMFYKLFTRV LGEKGLTAVERLMGMVLVMISVQMFLDGISNYLKTAG
Specific function: Unknown
COG id: COG2095
COG function: function code U; Multiple antibiotic transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0056 (marC) family [H]
Homologues:
Organism=Escherichia coli, GI1789842, Length=194, Percent_Identity=64.4329896907217, Blast_Score=248, Evalue=2e-67, Organism=Escherichia coli, GI1787809, Length=204, Percent_Identity=27.9411764705882, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787494, Length=200, Percent_Identity=28.5, Blast_Score=69, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002771 [H]
Pfam domain/function: PF01914 MarC [H]
EC number: NA
Molecular weight: Translated: 21355; Mature: 21355
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.6 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIFSAAVMLFLIMDPLGNLPIFASILRHIDPKKRRKVLIRELLFALVIMLSFLYAGEAI CCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSFLNLRSESVSIAGGIILFLIAIKMIFPQPGGVVGLAAGEEPFIVPMAIPLMAGPSILA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEHHHHHHHCCHHHHH ALILLAHTDSSRMGDWTIALVSAWGASAVILMFYKLFTRVLGEKGLTAVERLMGMVLVMI HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH SVQMFLDGISNYLKTAG HHHHHHHHHHHHHHCCC >Mature Secondary Structure MDIFSAAVMLFLIMDPLGNLPIFASILRHIDPKKRRKVLIRELLFALVIMLSFLYAGEAI CCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSFLNLRSESVSIAGGIILFLIAIKMIFPQPGGVVGLAAGEEPFIVPMAIPLMAGPSILA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEHHHHHHHCCHHHHH ALILLAHTDSSRMGDWTIALVSAWGASAVILMFYKLFTRVLGEKGLTAVERLMGMVLVMI HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH SVQMFLDGISNYLKTAG HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]