Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is ina [H]
Identifier: 160873255
GI number: 160873255
Start: 150789
End: 153404
Strand: Direct
Name: ina [H]
Synonym: Sbal195_0129
Alternate gene names: 160873255
Gene position: 150789-153404 (Clockwise)
Preceding gene: 160873254
Following gene: 160873257
Centisome position: 2.82
GC content: 46.1
Gene sequence:
>2616_bases ATGCGAAGTGCAAAAGGCGTGACAGCGTTTGGACTGATGTTGGCATTGATTAGCGGCGCGAGTATTGCGGCTCCGAATCA TACGCCTGCAGATGCGGGTGTGATTAATAAAGATCGAATTTTATATTGGTTGATTAAACGTGGCGAAGTGGCCGCCGATG CCAGTGATAGCGTAAAGCAGGAAGCGATAGAAGCGTATATTCATCGTGCCACTTTGGCTCAACCTAAGGCGCCGCGCATC GAAGTTGAAGCCGAACATGCGCGTCTGCAAAGAGCTAAGTCATCGCAAATGATGCGCTCACCCGCACAGCGTTTGCTGGT TGATGCGGATGTAAAAAAAACCGTTAAAGTACTCACTGTATTAGTGGATTTCCCTGATTTAAAACATGATAACAATGGCT TAAGTGCGGGCGATACGGCCATGTATTACCCAAGTTATCCTTCGTCCCACTACAAGGCATTACTCTTTTCGACGACTGGC TTTAATGGTCCACAGGGGCAGACGTTAGATTCGGCTTATCAATATTATCAAGCGGTTTCAGGGCAAACCTTCTCCTTTAC TGGGGATGTAAAGGGTTGGTATACCGCCTCACAAAATGCTGAATACTATGGTGCTAATGATCCAGATACTCGTAGTGATT CACAGGTCGAACAATTGGTAAAAGAAGCCGTATCTCAAGCCGTCGCGAATATGTCTCCTGCAGAGTTGGCTAGCTATGAT GTTGAAGACCAAAATGACTTGAACAACAACGGTAATTACAACGAGCCCGATGGCATTATCGACCATGTGATGATTTTCCA CTCTAGCATAGGTGAAGAAGCCGGTGGTGGAGCTTTAGGCGCGAGTGCAATTTGGTCGCATCGATTTTTTGTTGACCAAG CAACCAATGGCTATGCGCTTCCTGGTACGGATAAAAAAGTATTCGGTTATACCATTCAGCCTATCGATGCGGCCACGGGT GTGTGTACCCACGAATTTGGCCATGATTTAGGTCTGCCAGATGAATACGATACCACTGAAAATGATAATAAAGACGGCTC GCCTGTAGGGTTATGGTCTTTGATGTCTGGTGGAAGTTGGGCTGGCGCTATCGCTGGTGCCCAGCCGAGTGGCTTTAGTC CCTATGCGCGCTCTTACCTACAGGAAAGATATAGAGGTAAGTGGTTGAATGAACGTGAAATCAGCTTAGATAGTATTCCA AAATCTGGCATGGATGTGACCTTGAATGAGGCGGTTAATCATCAGGCGGTTAACCAGATCTCCATTCCACTTCCTCCAAC GCCAATCCCCTTTAAAGCACCTTATCAGGGCAGTTATCAGTATTATTCTGGTCAAGGGGATATGCTGAATAACAGCATGA ATTTCAATGTTACTTTGCCCGCAGTCACGACAGATAAACTGATCCTGAGTATGAAAGCCAGTTGGAGTATTGAACGTGAC TATGACTACATGCAAGTGAAAGTGGATGGTGAGGCTATTGCGGGTAATCACACTAAGTTTAACAATGGGGTAAATAGCGC TCGTCATATTATTACTGGCGAGTCGTCTGCGATTGCTCAGGCGGAGGGCAATGATGCTTGGGTAACGTTAGAGTATGATT TATCTGCCTATTCAGGGAAAACGATTGCGGTCGAGATCAATTATGTCACCGATGACTATACCGGAGGGTCAGGGATCACT CTCGATAACATCAGCGTTAAACAAAATACCACTGAGTTCTATAGTGATAATGCTGAAGTTGCGGATAAAGTGACATTCTA TGGTTATAGCCGGATTAAGGACTCACGTCCTGATCCAAAATCCCAGTCTCGTTATATTATCCAATTGCGTAGCCATAACG GTGTCGATGCGGGTTTGCAAGCAAAAAGCTTTGATCCTGGCGTATTAGTCTGGTTAGAAAATTTGGGTTACAGAGACAAT AACGTTTCAGAGCATGCTGGCCATGGCTTGATTGGCGTGATTGATGCTGACCAAAACCTGATTGGCACTCGCTCTACCGA GGTACAAATTCGCGATGCAGCCTTTAGCACAGTAAAACAAACCTTCTATGCAGGTGACAATAATCGCGATGCTGTCAGCC TGTTTGATGATAGTTTTGATTACAGCGCGCCGCTACAACCCCAGTCAGGCATAGTATTGCAGCAGTTAGGTTTGACGATG CAGGTACTATCGCAAGCCGGCAATAACAGCACAGCTGTGATTCGGTTAGCAAATGCAAATTCTGATGCTGTAGCGCCGTT AAAAGTCAGTGTTACTAATACGGTCAATCAATTAGTTGTAAACTTCACCACTAATATTAATGGTGGTATGGGAGCATTAA CCTACGCTTGGGATTTTGGTGATGGCACCACAAGTACAGCGGCTTCGCCAACCCATACCTATGCGAAGGCGGGCACTTAT ACTGTGACGCTTACAGTAACTGATGCGAAAAATACTAAGGATATTAGTAGTTTGGCAGTGACTGTTACCGCACCAGTTAC GCCCCCTGTCACACCCCCTGTCACACCTCCTGTGACTCCGCCGGCGAATGAGAGTTCTGGCGGTGGTAGTTTAGGTTGGT TGAGCCTTGCTTTTCTTGGCTTATTGACTTGGCGTCGCCAGTTAAATATTCGCTAA
Upstream 100 bases:
>100_bases AAAGGCAAATTTGTCTTAATACGCAAATTTGTCTTAATACAAAGAGACACTAGTCTTAATAAATAGAATGGCGTTGGCTG TTACAGTAAGGATGTTAAAA
Downstream 100 bases:
>100_bases GTTAATCGCGTGATAGCAGAGCAAAAATGCCTCTAATTTAGAGGCATTTTTATTTGTCATCAGTCATTAAAGCAAGCTTT GGCTAAAGCTCGGATTCAAG
Product: M6 family metalloprotease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 871; Mature: 871
Protein sequence:
>871_residues MRSAKGVTAFGLMLALISGASIAAPNHTPADAGVINKDRILYWLIKRGEVAADASDSVKQEAIEAYIHRATLAQPKAPRI EVEAEHARLQRAKSSQMMRSPAQRLLVDADVKKTVKVLTVLVDFPDLKHDNNGLSAGDTAMYYPSYPSSHYKALLFSTTG FNGPQGQTLDSAYQYYQAVSGQTFSFTGDVKGWYTASQNAEYYGANDPDTRSDSQVEQLVKEAVSQAVANMSPAELASYD VEDQNDLNNNGNYNEPDGIIDHVMIFHSSIGEEAGGGALGASAIWSHRFFVDQATNGYALPGTDKKVFGYTIQPIDAATG VCTHEFGHDLGLPDEYDTTENDNKDGSPVGLWSLMSGGSWAGAIAGAQPSGFSPYARSYLQERYRGKWLNEREISLDSIP KSGMDVTLNEAVNHQAVNQISIPLPPTPIPFKAPYQGSYQYYSGQGDMLNNSMNFNVTLPAVTTDKLILSMKASWSIERD YDYMQVKVDGEAIAGNHTKFNNGVNSARHIITGESSAIAQAEGNDAWVTLEYDLSAYSGKTIAVEINYVTDDYTGGSGIT LDNISVKQNTTEFYSDNAEVADKVTFYGYSRIKDSRPDPKSQSRYIIQLRSHNGVDAGLQAKSFDPGVLVWLENLGYRDN NVSEHAGHGLIGVIDADQNLIGTRSTEVQIRDAAFSTVKQTFYAGDNNRDAVSLFDDSFDYSAPLQPQSGIVLQQLGLTM QVLSQAGNNSTAVIRLANANSDAVAPLKVSVTNTVNQLVVNFTTNINGGMGALTYAWDFGDGTTSTAASPTHTYAKAGTY TVTLTVTDAKNTKDISSLAVTVTAPVTPPVTPPVTPPVTPPANESSGGGSLGWLSLAFLGLLTWRRQLNIR
Sequences:
>Translated_871_residues MRSAKGVTAFGLMLALISGASIAAPNHTPADAGVINKDRILYWLIKRGEVAADASDSVKQEAIEAYIHRATLAQPKAPRI EVEAEHARLQRAKSSQMMRSPAQRLLVDADVKKTVKVLTVLVDFPDLKHDNNGLSAGDTAMYYPSYPSSHYKALLFSTTG FNGPQGQTLDSAYQYYQAVSGQTFSFTGDVKGWYTASQNAEYYGANDPDTRSDSQVEQLVKEAVSQAVANMSPAELASYD VEDQNDLNNNGNYNEPDGIIDHVMIFHSSIGEEAGGGALGASAIWSHRFFVDQATNGYALPGTDKKVFGYTIQPIDAATG VCTHEFGHDLGLPDEYDTTENDNKDGSPVGLWSLMSGGSWAGAIAGAQPSGFSPYARSYLQERYRGKWLNEREISLDSIP KSGMDVTLNEAVNHQAVNQISIPLPPTPIPFKAPYQGSYQYYSGQGDMLNNSMNFNVTLPAVTTDKLILSMKASWSIERD YDYMQVKVDGEAIAGNHTKFNNGVNSARHIITGESSAIAQAEGNDAWVTLEYDLSAYSGKTIAVEINYVTDDYTGGSGIT LDNISVKQNTTEFYSDNAEVADKVTFYGYSRIKDSRPDPKSQSRYIIQLRSHNGVDAGLQAKSFDPGVLVWLENLGYRDN NVSEHAGHGLIGVIDADQNLIGTRSTEVQIRDAAFSTVKQTFYAGDNNRDAVSLFDDSFDYSAPLQPQSGIVLQQLGLTM QVLSQAGNNSTAVIRLANANSDAVAPLKVSVTNTVNQLVVNFTTNINGGMGALTYAWDFGDGTTSTAASPTHTYAKAGTY TVTLTVTDAKNTKDISSLAVTVTAPVTPPVTPPVTPPVTPPANESSGGGSLGWLSLAFLGLLTWRRQLNIR >Mature_871_residues MRSAKGVTAFGLMLALISGASIAAPNHTPADAGVINKDRILYWLIKRGEVAADASDSVKQEAIEAYIHRATLAQPKAPRI EVEAEHARLQRAKSSQMMRSPAQRLLVDADVKKTVKVLTVLVDFPDLKHDNNGLSAGDTAMYYPSYPSSHYKALLFSTTG FNGPQGQTLDSAYQYYQAVSGQTFSFTGDVKGWYTASQNAEYYGANDPDTRSDSQVEQLVKEAVSQAVANMSPAELASYD VEDQNDLNNNGNYNEPDGIIDHVMIFHSSIGEEAGGGALGASAIWSHRFFVDQATNGYALPGTDKKVFGYTIQPIDAATG VCTHEFGHDLGLPDEYDTTENDNKDGSPVGLWSLMSGGSWAGAIAGAQPSGFSPYARSYLQERYRGKWLNEREISLDSIP KSGMDVTLNEAVNHQAVNQISIPLPPTPIPFKAPYQGSYQYYSGQGDMLNNSMNFNVTLPAVTTDKLILSMKASWSIERD YDYMQVKVDGEAIAGNHTKFNNGVNSARHIITGESSAIAQAEGNDAWVTLEYDLSAYSGKTIAVEINYVTDDYTGGSGIT LDNISVKQNTTEFYSDNAEVADKVTFYGYSRIKDSRPDPKSQSRYIIQLRSHNGVDAGLQAKSFDPGVLVWLENLGYRDN NVSEHAGHGLIGVIDADQNLIGTRSTEVQIRDAAFSTVKQTFYAGDNNRDAVSLFDDSFDYSAPLQPQSGIVLQQLGLTM QVLSQAGNNSTAVIRLANANSDAVAPLKVSVTNTVNQLVVNFTTNINGGMGALTYAWDFGDGTTSTAASPTHTYAKAGTY TVTLTVTDAKNTKDISSLAVTVTAPVTPPVTPPVTPPVTPPANESSGGGSLGWLSLAFLGLLTWRRQLNIR
Specific function: Neutral metalloprotease that is secreted to degrade antibacterial proteins produced by the insect host for its defense (attacins and cecropins). Probably degrades some unknown crucial protein(s) too, since it is toxic when injected to insect larvae [H]
COG id: COG4412
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M6 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012300 - InterPro: IPR008757 [H]
Pfam domain/function: PF05547 Peptidase_M6 [H]
EC number: NA
Molecular weight: Translated: 93959; Mature: 93959
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS50093 PKD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSAKGVTAFGLMLALISGASIAAPNHTPADAGVINKDRILYWLIKRGEVAADASDSVKQ CCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHH EAIEAYIHRATLAQPKAPRIEVEAEHARLQRAKSSQMMRSPAQRLLVDADVKKTVKVLTV HHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHH LVDFPDLKHDNNGLSAGDTAMYYPSYPSSHYKALLFSTTGFNGPQGQTLDSAYQYYQAVS EECCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHC GQTFSFTGDVKGWYTASQNAEYYGANDPDTRSDSQVEQLVKEAVSQAVANMSPAELASYD CCEEEEECCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCC VEDQNDLNNNGNYNEPDGIIDHVMIFHSSIGEEAGGGALGASAIWSHRFFVDQATNGYAL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHEEEEEEECCCCEEC PGTDKKVFGYTIQPIDAATGVCTHEFGHDLGLPDEYDTTENDNKDGSPVGLWSLMSGGSW CCCCCEEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC AGAIAGAQPSGFSPYARSYLQERYRGKWLNEREISLDSIPKSGMDVTLNEAVNHQAVNQI EEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCEEHHHHHCCHHHCEE SIPLPPTPIPFKAPYQGSYQYYSGQGDMLNNSMNFNVTLPAVTTDKLILSMKASWSIERD ECCCCCCCCCCCCCCCCCEEEECCCCCEECCCEEEEEEECCEECCEEEEEEECCCCEECC YDYMQVKVDGEAIAGNHTKFNNGVNSARHIITGESSAIAQAEGNDAWVTLEYDLSAYSGK CCEEEEEECCEEECCCCCCCCCCCCCCCEEEECCCCEEEECCCCCEEEEEEEECCCCCCC TIAVEINYVTDDYTGGSGITLDNISVKQNTTEFYSDNAEVADKVTFYGYSRIKDSRPDPK EEEEEEEEEECCCCCCCCEEEECEEECCCCHHHHCCCCHHHHEEEEEEHHHHCCCCCCCC SQSRYIIQLRSHNGVDAGLQAKSFDPGVLVWLENLGYRDNNVSEHAGHGLIGVIDADQNL CCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHCCCCEEEEEECCCCC IGTRSTEVQIRDAAFSTVKQTFYAGDNNRDAVSLFDDSFDYSAPLQPQSGIVLQQLGLTM CCCCCCEEEEEHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCHHH QVLSQAGNNSTAVIRLANANSDAVAPLKVSVTNTVNQLVVNFTTNINGGMGALTYAWDFG HHHHHCCCCCEEEEEEECCCCCCEEEEEEEEHHCCEEEEEEEEECCCCCCEEEEEEEECC DGTTSTAASPTHTYAKAGTYTVTLTVTDAKNTKDISSLAVTVTAPVTPPVTPPVTPPVTP CCCCCCCCCCCCHHCCCCEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC PANESSGGGSLGWLSLAFLGLLTWRRQLNIR CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRSAKGVTAFGLMLALISGASIAAPNHTPADAGVINKDRILYWLIKRGEVAADASDSVKQ CCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHH EAIEAYIHRATLAQPKAPRIEVEAEHARLQRAKSSQMMRSPAQRLLVDADVKKTVKVLTV HHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHH LVDFPDLKHDNNGLSAGDTAMYYPSYPSSHYKALLFSTTGFNGPQGQTLDSAYQYYQAVS EECCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHC GQTFSFTGDVKGWYTASQNAEYYGANDPDTRSDSQVEQLVKEAVSQAVANMSPAELASYD CCEEEEECCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCC VEDQNDLNNNGNYNEPDGIIDHVMIFHSSIGEEAGGGALGASAIWSHRFFVDQATNGYAL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHEEEEEEECCCCEEC PGTDKKVFGYTIQPIDAATGVCTHEFGHDLGLPDEYDTTENDNKDGSPVGLWSLMSGGSW CCCCCEEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC AGAIAGAQPSGFSPYARSYLQERYRGKWLNEREISLDSIPKSGMDVTLNEAVNHQAVNQI EEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCEEHHHHHCCHHHCEE SIPLPPTPIPFKAPYQGSYQYYSGQGDMLNNSMNFNVTLPAVTTDKLILSMKASWSIERD ECCCCCCCCCCCCCCCCCEEEECCCCCEECCCEEEEEEECCEECCEEEEEEECCCCEECC YDYMQVKVDGEAIAGNHTKFNNGVNSARHIITGESSAIAQAEGNDAWVTLEYDLSAYSGK CCEEEEEECCEEECCCCCCCCCCCCCCCEEEECCCCEEEECCCCCEEEEEEEECCCCCCC TIAVEINYVTDDYTGGSGITLDNISVKQNTTEFYSDNAEVADKVTFYGYSRIKDSRPDPK EEEEEEEEEECCCCCCCCEEEECEEECCCCHHHHCCCCHHHHEEEEEEHHHHCCCCCCCC SQSRYIIQLRSHNGVDAGLQAKSFDPGVLVWLENLGYRDNNVSEHAGHGLIGVIDADQNL CCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHCCCCEEEEEECCCCC IGTRSTEVQIRDAAFSTVKQTFYAGDNNRDAVSLFDDSFDYSAPLQPQSGIVLQQLGLTM CCCCCCEEEEEHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCHHH QVLSQAGNNSTAVIRLANANSDAVAPLKVSVTNTVNQLVVNFTTNINGGMGALTYAWDFG HHHHHCCCCCEEEEEEECCCCCCEEEEEEEEHHCCEEEEEEEEECCCCCCEEEEEEEECC DGTTSTAASPTHTYAKAGTYTVTLTVTDAKNTKDISSLAVTVTAPVTPPVTPPVTPPVTP CCCCCCCCCCCCHHCCCCEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC PANESSGGGSLGWLSLAFLGLLTWRRQLNIR CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2089225; 6421577 [H]