Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is yusP [H]
Identifier: 160873190
GI number: 160873190
Start: 73371
End: 74834
Strand: Direct
Name: yusP [H]
Synonym: Sbal195_0064
Alternate gene names: 160873190
Gene position: 73371-74834 (Clockwise)
Preceding gene: 160873189
Following gene: 160873191
Centisome position: 1.37
GC content: 52.66
Gene sequence:
>1464_bases ATGTCCTTAGAGCCTGCGTTATCCCAGAGTGACCCTTTACCTACTTCTGTTTTTCTCGCCATTTTCTCGGCTGTATTCTT GCCCATGTTTTTGGCGGCAGTCGATCAAACCTTACTCGCCACGGCGACGCCAGCCATAGTTGAAGATCTTGGCGGCCTGC GCCAAGCCTCGTGGATCACTATCGGTTATATGCTGGCGATGGCCGCTTCTGTGCCTATTTATGGCTGGTTAGGGGATAAC TTCGGTCGCGCGAAAATCCTGATGATCGCCATAGTGATTTTTGCACTGGGTTCCATCGTTTCGGCGAGTGCGGGCACTAT GGATCACATGATCGCCGGACGTATCTTGCAGGGCATGGGCGGTGGCGGCTTGATGAGTTTGTCTCAATCCTTGATTGGCG AGTTAGTTCCCATTCGGCAGCGGGCGCGTTTCCAAGGCTATTTTGCTGCTATGTTTACCCTCGCGAGTGTTGGCGGCCCT GTCATTGGCGGTATTGTGGTGCACGCTTATTCGTGGCATTGGCTATTTTGGGCGAATATTCCACTGGCTATGCTAGCGGT ATGGCGACTCAATGGGCTGCATAAGCACAGCGTTAAACCCGTACGCCAAGGCAAGTTTGATTTAGTGGGCGTGGTCTTGT TTCCGACCATTATCACCGCACTGCTATATTGGTTATCTGTGGCGGGGCAAGAGTTTGCTTGGCTTTCTGCGACCAGCTTA GGCTTTGCCGTCTTTGTGGTGTTCGGCATTCTAGGTCTGCTGTTGTGGGAACGGCGATTGGCGAGCCCGTTTCTGCCGTT AGATTTACTGGCGAAGAAGGCCGTGTATATGCCACTACTAACGGCGGCGCTGTTTGCGGCTTGTTTGTTTGCGATGATCT TCTTCCTGCCGATTTATCTGCAAGTGGGCTTACACACCAATCCCGCCAAAACCGGTTTGCTGCTCTTGCCTATGACCTTC GGTATTGTCACTGGCTCGACGATTGCGGGCCGACTGTTAAGCAAAGATGTCGCGCCTAAGTGGTTGCCGACCTTTGGTAT GGGCTTAGCTTTCATCGGCTTGATATTGATTAGTTTTGTGCCGCCTAATGCCAATGTAATCGGCGGTTTAGGTGTGTTGG TCGGAATAGGATTAGGGACTGTGATGCCGAGCGTGCAGCTCGTAGTGCAGAGCGTGTCGGGCAAGGCGCGACTCAGCCAG ATCACGGCCATGGTGTCACTGTGTCGTTCTATGGGCGCTGCTATTGGTACTGCGCTGTTTAGCGTGCTGCTTTATAGTCT GTTGCCACTCACGGGTTCAGAGCTTGGCATCGCCGCGATTAAAACATTGCCGACAGAGGTGGTGCATCACGCCTTCCAAT ATGGATTTATGGCCGCTGCGGGTGTGGCATTGTGTGCCGCAATAGTCGGTTTTCTATCCCCTGCGACGGCATTAAAAGAT CACGATAGCGAAACTGCGCATTAA
Upstream 100 bases:
>100_bases AGTTATTGGGCGTCTAAGTATTGGAATGCACGGCGAATTTAGCACATCTTCTTTATGCACTTTCTTTTTGCACTTGGGCT GATGAGTTAGCGGAGACAAT
Downstream 100 bases:
>100_bases GCCTAGATTTGCAGGTGCACGACCCATTTAAGCCGTGTACTATTTGCGCTGAGCCGTATTTTTGTGGCCTTATTCGATTC CAGGACATAAGCATGACAAC
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 487; Mature: 486
Protein sequence:
>487_residues MSLEPALSQSDPLPTSVFLAIFSAVFLPMFLAAVDQTLLATATPAIVEDLGGLRQASWITIGYMLAMAASVPIYGWLGDN FGRAKILMIAIVIFALGSIVSASAGTMDHMIAGRILQGMGGGGLMSLSQSLIGELVPIRQRARFQGYFAAMFTLASVGGP VIGGIVVHAYSWHWLFWANIPLAMLAVWRLNGLHKHSVKPVRQGKFDLVGVVLFPTIITALLYWLSVAGQEFAWLSATSL GFAVFVVFGILGLLLWERRLASPFLPLDLLAKKAVYMPLLTAALFAACLFAMIFFLPIYLQVGLHTNPAKTGLLLLPMTF GIVTGSTIAGRLLSKDVAPKWLPTFGMGLAFIGLILISFVPPNANVIGGLGVLVGIGLGTVMPSVQLVVQSVSGKARLSQ ITAMVSLCRSMGAAIGTALFSVLLYSLLPLTGSELGIAAIKTLPTEVVHHAFQYGFMAAAGVALCAAIVGFLSPATALKD HDSETAH
Sequences:
>Translated_487_residues MSLEPALSQSDPLPTSVFLAIFSAVFLPMFLAAVDQTLLATATPAIVEDLGGLRQASWITIGYMLAMAASVPIYGWLGDN FGRAKILMIAIVIFALGSIVSASAGTMDHMIAGRILQGMGGGGLMSLSQSLIGELVPIRQRARFQGYFAAMFTLASVGGP VIGGIVVHAYSWHWLFWANIPLAMLAVWRLNGLHKHSVKPVRQGKFDLVGVVLFPTIITALLYWLSVAGQEFAWLSATSL GFAVFVVFGILGLLLWERRLASPFLPLDLLAKKAVYMPLLTAALFAACLFAMIFFLPIYLQVGLHTNPAKTGLLLLPMTF GIVTGSTIAGRLLSKDVAPKWLPTFGMGLAFIGLILISFVPPNANVIGGLGVLVGIGLGTVMPSVQLVVQSVSGKARLSQ ITAMVSLCRSMGAAIGTALFSVLLYSLLPLTGSELGIAAIKTLPTEVVHHAFQYGFMAAAGVALCAAIVGFLSPATALKD HDSETAH >Mature_486_residues SLEPALSQSDPLPTSVFLAIFSAVFLPMFLAAVDQTLLATATPAIVEDLGGLRQASWITIGYMLAMAASVPIYGWLGDNF GRAKILMIAIVIFALGSIVSASAGTMDHMIAGRILQGMGGGGLMSLSQSLIGELVPIRQRARFQGYFAAMFTLASVGGPV IGGIVVHAYSWHWLFWANIPLAMLAVWRLNGLHKHSVKPVRQGKFDLVGVVLFPTIITALLYWLSVAGQEFAWLSATSLG FAVFVVFGILGLLLWERRLASPFLPLDLLAKKAVYMPLLTAALFAACLFAMIFFLPIYLQVGLHTNPAKTGLLLLPMTFG IVTGSTIAGRLLSKDVAPKWLPTFGMGLAFIGLILISFVPPNANVIGGLGVLVGIGLGTVMPSVQLVVQSVSGKARLSQI TAMVSLCRSMGAAIGTALFSVLLYSLLPLTGSELGIAAIKTLPTEVVHHAFQYGFMAAAGVALCAAIVGFLSPATALKDH DSETAH
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=426, Percent_Identity=27.9342723004695, Blast_Score=130, Evalue=3e-31, Organism=Escherichia coli, GI1790195, Length=314, Percent_Identity=27.0700636942675, Blast_Score=112, Evalue=5e-26, Organism=Escherichia coli, GI1789042, Length=331, Percent_Identity=27.190332326284, Blast_Score=112, Evalue=7e-26, Organism=Escherichia coli, GI1788392, Length=341, Percent_Identity=28.4457478005865, Blast_Score=99, Evalue=8e-22, Organism=Escherichia coli, GI1788710, Length=319, Percent_Identity=25.3918495297806, Blast_Score=99, Evalue=8e-22, Organism=Escherichia coli, GI1788509, Length=168, Percent_Identity=27.3809523809524, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6322958, Length=469, Percent_Identity=24.3070362473348, Blast_Score=111, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6323735, Length=327, Percent_Identity=26.2996941896024, Blast_Score=109, Evalue=9e-25, Organism=Saccharomyces cerevisiae, GI6321663, Length=488, Percent_Identity=23.7704918032787, Blast_Score=99, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6325455, Length=463, Percent_Identity=22.0302375809935, Blast_Score=94, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6319770, Length=383, Percent_Identity=26.1096605744125, Blast_Score=87, Evalue=5e-18, Organism=Saccharomyces cerevisiae, GI6324415, Length=422, Percent_Identity=24.6445497630332, Blast_Score=78, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6319783, Length=370, Percent_Identity=23.7837837837838, Blast_Score=70, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6321740, Length=462, Percent_Identity=22.5108225108225, Blast_Score=64, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6322959, Length=473, Percent_Identity=22.1987315010571, Blast_Score=64, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6319782, Length=473, Percent_Identity=22.1987315010571, Blast_Score=64, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 51468; Mature: 51337
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLEPALSQSDPLPTSVFLAIFSAVFLPMFLAAVDQTLLATATPAIVEDLGGLRQASWIT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHH IGYMLAMAASVPIYGWLGDNFGRAKILMIAIVIFALGSIVSASAGTMDHMIAGRILQGMG HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC GGGLMSLSQSLIGELVPIRQRARFQGYFAAMFTLASVGGPVIGGIVVHAYSWHWLFWANI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEECCH PLAMLAVWRLNGLHKHSVKPVRQGKFDLVGVVLFPTIITALLYWLSVAGQEFAWLSATSL HHHHHHHHHHCCCHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH GFAVFVVFGILGLLLWERRLASPFLPLDLLAKKAVYMPLLTAALFAACLFAMIFFLPIYL HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVGLHTNPAKTGLLLLPMTFGIVTGSTIAGRLLSKDVAPKWLPTFGMGLAFIGLILISFV HHCCCCCCCCCCEEHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC PPNANVIGGLGVLVGIGLGTVMPSVQLVVQSVSGKARLSQITAMVSLCRSMGAAIGTALF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH SVLLYSLLPLTGSELGIAAIKTLPTEVVHHAFQYGFMAAAGVALCAAIVGFLSPATALKD HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHC HDSETAH CCCCCCC >Mature Secondary Structure SLEPALSQSDPLPTSVFLAIFSAVFLPMFLAAVDQTLLATATPAIVEDLGGLRQASWIT CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHH IGYMLAMAASVPIYGWLGDNFGRAKILMIAIVIFALGSIVSASAGTMDHMIAGRILQGMG HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC GGGLMSLSQSLIGELVPIRQRARFQGYFAAMFTLASVGGPVIGGIVVHAYSWHWLFWANI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEECCH PLAMLAVWRLNGLHKHSVKPVRQGKFDLVGVVLFPTIITALLYWLSVAGQEFAWLSATSL HHHHHHHHHHCCCHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH GFAVFVVFGILGLLLWERRLASPFLPLDLLAKKAVYMPLLTAALFAACLFAMIFFLPIYL HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVGLHTNPAKTGLLLLPMTFGIVTGSTIAGRLLSKDVAPKWLPTFGMGLAFIGLILISFV HHCCCCCCCCCCEEHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC PPNANVIGGLGVLVGIGLGTVMPSVQLVVQSVSGKARLSQITAMVSLCRSMGAAIGTALF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH SVLLYSLLPLTGSELGIAAIKTLPTEVVHHAFQYGFMAAAGVALCAAIVGFLSPATALKD HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHC HDSETAH CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]