Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159901063
Identifier: 159901063
GI number: 159901063
Start: 5825711
End: 5826268
Strand: Direct
Name: 159901063
Synonym: Haur_4551
Alternate gene names: NA
Gene position: 5825711-5826268 (Clockwise)
Preceding gene: 159901061
Following gene: 159901064
Centisome position: 91.79
GC content: 51.43
Gene sequence:
>558_bases ATGACGAACGCTGCGTACACACGCCTAAAACCGCAGATCATCACCGGTCGCCGGATTCTGCTGACGGCTTTTGTTACCCC GAATGACGATTATTTTGAGCCGCCCGACGGATGGATCGACCCGATTGAAGTTGCGCTCTATGGCAATAGTTTTGGCTGTA ATTTGGCAACGCCCAATGGCAACAAACGCTATATCGATTCCTACAACCGCGATGAGGTGTTGTGGACGACCAATAGTTTG ATGCAAAATTGCCAGTTGCGGCCAGATTGGGGCTACTCCAATAATTCAACTCTTGATCTGAGCCGCTTGGCTCGGTTCGT TGGGCGGTTTACCAAGGCATGTGTGGCAATCTATCGCCATAATCATCCTCCAGTTACGGTTGGGATGGCAATTATTCCTG CTCAAGGGCTACAATTGCTCGATAGTCAGACCAATTCGCCATTTGGGCCGTTGGTAACCCAAGCGCGGGTGGTGGCGCAA ACGGCGCTTGAGGCAGGAGCCGACGAACGTTTGCTGCAAACGATTCGCGATGGTTTATTATCTAGTGCAGGCAGCTAA
Upstream 100 bases:
>100_bases ATCGCATGCTGCTGGCGCGAAAGCATTACCGCCTAAGCTAGCGTTGTGTAGTATACTAAGCCACAACGCTATTCTATTCT TCTCTAGCTGGTGTGCTGCT
Downstream 100 bases:
>100_bases AATGGTAGCTCAGTTAGCGCTCGCAGACACAACGAGGTGATTGATGGGCAGTCAAATTACAACTGATGCTGGCATTCCAG TTGAGCCAATTTATCGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MTNAAYTRLKPQIITGRRILLTAFVTPNDDYFEPPDGWIDPIEVALYGNSFGCNLATPNGNKRYIDSYNRDEVLWTTNSL MQNCQLRPDWGYSNNSTLDLSRLARFVGRFTKACVAIYRHNHPPVTVGMAIIPAQGLQLLDSQTNSPFGPLVTQARVVAQ TALEAGADERLLQTIRDGLLSSAGS
Sequences:
>Translated_185_residues MTNAAYTRLKPQIITGRRILLTAFVTPNDDYFEPPDGWIDPIEVALYGNSFGCNLATPNGNKRYIDSYNRDEVLWTTNSL MQNCQLRPDWGYSNNSTLDLSRLARFVGRFTKACVAIYRHNHPPVTVGMAIIPAQGLQLLDSQTNSPFGPLVTQARVVAQ TALEAGADERLLQTIRDGLLSSAGS >Mature_184_residues TNAAYTRLKPQIITGRRILLTAFVTPNDDYFEPPDGWIDPIEVALYGNSFGCNLATPNGNKRYIDSYNRDEVLWTTNSLM QNCQLRPDWGYSNNSTLDLSRLARFVGRFTKACVAIYRHNHPPVTVGMAIIPAQGLQLLDSQTNSPFGPLVTQARVVAQT ALEAGADERLLQTIRDGLLSSAGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20447; Mature: 20316
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNAAYTRLKPQIITGRRILLTAFVTPNDDYFEPPDGWIDPIEVALYGNSFGCNLATPNG CCCCCCHHCCCEEECCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEECCCC NKRYIDSYNRDEVLWTTNSLMQNCQLRPDWGYSNNSTLDLSRLARFVGRFTKACVAIYRH CEEECCCCCCCEEEEEHHHHHHCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHC NHPPVTVGMAIIPAQGLQLLDSQTNSPFGPLVTQARVVAQTALEAGADERLLQTIRDGLL CCCCEEEEEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH SSAGS HCCCC >Mature Secondary Structure TNAAYTRLKPQIITGRRILLTAFVTPNDDYFEPPDGWIDPIEVALYGNSFGCNLATPNG CCCCCHHCCCEEECCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEECCCC NKRYIDSYNRDEVLWTTNSLMQNCQLRPDWGYSNNSTLDLSRLARFVGRFTKACVAIYRH CEEECCCCCCCEEEEEHHHHHHCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHC NHPPVTVGMAIIPAQGLQLLDSQTNSPFGPLVTQARVVAQTALEAGADERLLQTIRDGLL CCCCEEEEEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH SSAGS HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA