Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
---|---|
Accession | NC_009972 |
Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159901022
Identifier: 159901022
GI number: 159901022
Start: 5773696
End: 5774787
Strand: Direct
Name: 159901022
Synonym: Haur_4509
Alternate gene names: NA
Gene position: 5773696-5774787 (Clockwise)
Preceding gene: 159901021
Following gene: 159901023
Centisome position: 90.97
GC content: 49.73
Gene sequence:
>1092_bases ATGCTTCAAACCATTGTTCGCTATCGTTGGCTGTTGGTCTTCGTTGGTTTTTTGGTAGCGGTCCCAATCGCTGCTCAAAC GGCGGAGAAAAATAAAGGGGCTGATTGGTTGCTGACCCAACAGCAGTCGGATGGCAGTTTTGATTCGTATTATCACTCTC CACTTGATCCAACGGCATGTTCGGTGTATGCCCTCCATGCGGCGGGCTATCAAATTGATCCAGCCACGCAACGCTTTATT GAGCAACAGGCTCAGAGCTATATTGGGCATCCGGCTAAAGCTTCGGCCATTGTCATGGCTCAATTGCTAACTGGTCATGA TCCCCGTTCGGTTGGTGGGGTCGATTTGGTTGAAGCAATCATCAAGAGCTACGATCCTGCAACGGGCATGTATGGTGAAA ACTTGTATGAGAATTCCTTGGTAATGATGGCCTTGAAAGCTGCTGGCGAGGCGATTGAGCCACAGGCAATTCAGACGATT CTTGATCAACAGTTGGCTGATGGGTCGTGGAGTACTAGTACGCAAAACACCGCCTTACAAATTCAGGCCTTAGTCGCGGC TGATCAAAAGCAATCTGCGGCAATTCCGGCAGCTTTGGCCTTCTTGCAAACTCAGCAAGATTTTGATCGCGGGTTTATGA ATAATCGCGACTTTGAGCCGACAGCGTTTAAGGATGCAATTTCAACGTCCTTGGCCATCCAAGCTATCTTAGCAACTGGT GGCGACCCCAAGGCTGAACCATGGGGCGATAATATCAATAATCCTATCAATGCTTTGCGGCGTTTGCAGCTTGCTGATGG TGGCTTTCGGCTCGATTCATCGACCCCACAGCCTGATACGATGTCAACTTGTTCGTCTGTTCAGGCTGTGCTGCAAAAAA CCTATCCATTTATTGAACTTGCCAACATTGGCATTACGCTTACCCCGACCTTAGCTCCTGCCGATGGCTCGACAGCCACT CCCGTTCAGCAACCTGGCCTACCTGGGGTGTTACCAGACACTAGCTCAAGCTCAAATCTGGCCTTGCCAATTTTGCTTGG CGTATTGGCTGCCTGTGTATTGGTTGGCCTACGTTTGCGCAAATTGGCCTAA
Upstream 100 bases:
>100_bases CTAGGCATAAGATTTCCATAATAATCCATCAGCCTGATTGATTATTGGTTTTGCTGGCCAAATTGGTGGGCTGATCTGTG TGGTTTTAGGAGGTATTGGC
Downstream 100 bases:
>100_bases ATAGGCCAGTGGATTGATTCGCGTAATCATCTTGGTGTCGCTCCTACTGTATGTAGGTTCATGCTCAGTGTTCCACATTC AGCGGGAGCGGGTCAGAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MLQTIVRYRWLLVFVGFLVAVPIAAQTAEKNKGADWLLTQQQSDGSFDSYYHSPLDPTACSVYALHAAGYQIDPATQRFI EQQAQSYIGHPAKASAIVMAQLLTGHDPRSVGGVDLVEAIIKSYDPATGMYGENLYENSLVMMALKAAGEAIEPQAIQTI LDQQLADGSWSTSTQNTALQIQALVAADQKQSAAIPAALAFLQTQQDFDRGFMNNRDFEPTAFKDAISTSLAIQAILATG GDPKAEPWGDNINNPINALRRLQLADGGFRLDSSTPQPDTMSTCSSVQAVLQKTYPFIELANIGITLTPTLAPADGSTAT PVQQPGLPGVLPDTSSSSNLALPILLGVLAACVLVGLRLRKLA
Sequences:
>Translated_363_residues MLQTIVRYRWLLVFVGFLVAVPIAAQTAEKNKGADWLLTQQQSDGSFDSYYHSPLDPTACSVYALHAAGYQIDPATQRFI EQQAQSYIGHPAKASAIVMAQLLTGHDPRSVGGVDLVEAIIKSYDPATGMYGENLYENSLVMMALKAAGEAIEPQAIQTI LDQQLADGSWSTSTQNTALQIQALVAADQKQSAAIPAALAFLQTQQDFDRGFMNNRDFEPTAFKDAISTSLAIQAILATG GDPKAEPWGDNINNPINALRRLQLADGGFRLDSSTPQPDTMSTCSSVQAVLQKTYPFIELANIGITLTPTLAPADGSTAT PVQQPGLPGVLPDTSSSSNLALPILLGVLAACVLVGLRLRKLA >Mature_363_residues MLQTIVRYRWLLVFVGFLVAVPIAAQTAEKNKGADWLLTQQQSDGSFDSYYHSPLDPTACSVYALHAAGYQIDPATQRFI EQQAQSYIGHPAKASAIVMAQLLTGHDPRSVGGVDLVEAIIKSYDPATGMYGENLYENSLVMMALKAAGEAIEPQAIQTI LDQQLADGSWSTSTQNTALQIQALVAADQKQSAAIPAALAFLQTQQDFDRGFMNNRDFEPTAFKDAISTSLAIQAILATG GDPKAEPWGDNINNPINALRRLQLADGGFRLDSSTPQPDTMSTCSSVQAVLQKTYPFIELANIGITLTPTLAPADGSTAT PVQQPGLPGVLPDTSSSSNLALPILLGVLAACVLVGLRLRKLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38716; Mature: 38716
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQTIVRYRWLLVFVGFLVAVPIAAQTAEKNKGADWLLTQQQSDGSFDSYYHSPLDPTAC CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHCCCCCCCCHH SVYALHAAGYQIDPATQRFIEQQAQSYIGHPAKASAIVMAQLLTGHDPRSVGGVDLVEAI HHEEHHHCCCEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHH IKSYDPATGMYGENLYENSLVMMALKAAGEAIEPQAIQTILDQQLADGSWSTSTQNTALQ HHCCCCCCCCCCCCHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHEE IQALVAADQKQSAAIPAALAFLQTQQDFDRGFMNNRDFEPTAFKDAISTSLAIQAILATG EHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCC GDPKAEPWGDNINNPINALRRLQLADGGFRLDSSTPQPDTMSTCSSVQAVLQKTYPFIEL CCCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEE ANIGITLTPTLAPADGSTATPVQQPGLPGVLPDTSSSSNLALPILLGVLAACVLVGLRLR ECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH KLA HCC >Mature Secondary Structure MLQTIVRYRWLLVFVGFLVAVPIAAQTAEKNKGADWLLTQQQSDGSFDSYYHSPLDPTAC CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHCCCCCCCCHH SVYALHAAGYQIDPATQRFIEQQAQSYIGHPAKASAIVMAQLLTGHDPRSVGGVDLVEAI HHEEHHHCCCEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHH IKSYDPATGMYGENLYENSLVMMALKAAGEAIEPQAIQTILDQQLADGSWSTSTQNTALQ HHCCCCCCCCCCCCHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHEE IQALVAADQKQSAAIPAALAFLQTQQDFDRGFMNNRDFEPTAFKDAISTSLAIQAILATG EHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCC GDPKAEPWGDNINNPINALRRLQLADGGFRLDSSTPQPDTMSTCSSVQAVLQKTYPFIEL CCCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEE ANIGITLTPTLAPADGSTATPVQQPGLPGVLPDTSSSSNLALPILLGVLAACVLVGLRLR ECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH KLA HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA