Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is thrC [H]
Identifier: 159901020
GI number: 159901020
Start: 5770837
End: 5771910
Strand: Direct
Name: thrC [H]
Synonym: Haur_4507
Alternate gene names: 159901020
Gene position: 5770837-5771910 (Clockwise)
Preceding gene: 159901019
Following gene: 159901021
Centisome position: 90.93
GC content: 53.72
Gene sequence:
>1074_bases ATGAGTCAGCTAACCACCCATGCTTCGGCGGTGCCATTACTCGAACGCTACCGCCAATTTTTGCCGATCACTGCCCAAAC GCCAATTGTCACCTTGCACGAGGGCAATACACCGTTGATCAATGTGCCACGCTTGGCTGCCCACCTTGGGGTGCGCGAAT TGTGGCTCAAATTGGAATCCATGAATCCAACTGGTTCGTTCAAGGATCGCGGCATGGTCATGGCGATTGCCAAAGCACTC GAAGCTGGCAGCAAAGCCGTGGTCTGCGCCTCAACTGGCAATACCAGTGCTGCCGCCGCTGCCTATGCCGCTCGGATGGG CATGGAATGTGTAGTGGTCGTGCCTGCTGGCAAAATCGCCTTAGGTAAATTGGCTCAAGCTTTGATGTACGGAGCCAAAC TCTTGGTGATCGAAGGCAATTTCGACCAAGCCTTGGATATGGTGCGCGTGTTGGCCGAACAACACCCAATTACTTTGGTC AACTCGGTTAACCCCTATCGTTTGGAAGGCCAAGCGACCGCTGCCTACGAAATTTGCGATGTGCTCGGCGATGCACCCGA TTATTTGGCCTTGCCAGTTGGGAATGCTGGCAATATTTCGGCCTATTGGATGGGCTTCAAACGCTATTATGAAGCGCATC GCTCGGAAAGCTTGCCCAAAATTTTGGGTTTTGAGGCAACTGGTTCGGCAGCAATCGTGCGCGGTGAGCCAATTGCTTAT CCTGAAACCGTGGCAACCGCGATTCGAATTGGCAATCCGGCTTCGTGGCAGTTGGCAGTTAATGCTCGCGACGAATCGGA AGGCACGATCGATCATGTTAGCGATGAAGAAATTTTGGCGGCATGGCGCGATCTCTCGGCACTCGAAGGTATTTTCTGCG AACCAGCTTCGGCAGCAGGGGTTGCCGGCATTCGCAAGCTTTTGGCTGCTGGCAGCATCGATCCCAATGGCCGGTTTGTG GCAGTTTTGACTGGCCATGGCTTGAAAGATCCACAATTGGCTGTTGAGCAGTTCTCGGTTCCACAGGCGATCCCTGCTGA ATTGAGCGCTGTGGTCGCCGCCTTAGATTTGTAG
Upstream 100 bases:
>100_bases AACTAACTCAACAATAATCTAAATATGTTATAATCAGCGCCATCGGCGATGATGCCCTTTTCCGCATTGGGAAGGGGCTT TTTTGTAGGACACACCAGCT
Downstream 100 bases:
>100_bases TGGCGCGGTGAGAGTGAGCAAGGTTTTGACGCTATTGATTTAGCCACATTCAGGCTTTTGAGCAGCAACTTAATTGCTGG GGGCAAAAGGTTGTTGAGTT
Product: threonine synthase
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MSQLTTHASAVPLLERYRQFLPITAQTPIVTLHEGNTPLINVPRLAAHLGVRELWLKLESMNPTGSFKDRGMVMAIAKAL EAGSKAVVCASTGNTSAAAAAYAARMGMECVVVVPAGKIALGKLAQALMYGAKLLVIEGNFDQALDMVRVLAEQHPITLV NSVNPYRLEGQATAAYEICDVLGDAPDYLALPVGNAGNISAYWMGFKRYYEAHRSESLPKILGFEATGSAAIVRGEPIAY PETVATAIRIGNPASWQLAVNARDESEGTIDHVSDEEILAAWRDLSALEGIFCEPASAAGVAGIRKLLAAGSIDPNGRFV AVLTGHGLKDPQLAVEQFSVPQAIPAELSAVVAALDL
Sequences:
>Translated_357_residues MSQLTTHASAVPLLERYRQFLPITAQTPIVTLHEGNTPLINVPRLAAHLGVRELWLKLESMNPTGSFKDRGMVMAIAKAL EAGSKAVVCASTGNTSAAAAAYAARMGMECVVVVPAGKIALGKLAQALMYGAKLLVIEGNFDQALDMVRVLAEQHPITLV NSVNPYRLEGQATAAYEICDVLGDAPDYLALPVGNAGNISAYWMGFKRYYEAHRSESLPKILGFEATGSAAIVRGEPIAY PETVATAIRIGNPASWQLAVNARDESEGTIDHVSDEEILAAWRDLSALEGIFCEPASAAGVAGIRKLLAAGSIDPNGRFV AVLTGHGLKDPQLAVEQFSVPQAIPAELSAVVAALDL >Mature_356_residues SQLTTHASAVPLLERYRQFLPITAQTPIVTLHEGNTPLINVPRLAAHLGVRELWLKLESMNPTGSFKDRGMVMAIAKALE AGSKAVVCASTGNTSAAAAAYAARMGMECVVVVPAGKIALGKLAQALMYGAKLLVIEGNFDQALDMVRVLAEQHPITLVN SVNPYRLEGQATAAYEICDVLGDAPDYLALPVGNAGNISAYWMGFKRYYEAHRSESLPKILGFEATGSAAIVRGEPIAYP ETVATAIRIGNPASWQLAVNARDESEGTIDHVSDEEILAAWRDLSALEGIFCEPASAAGVAGIRKLLAAGSIDPNGRFVA VLTGHGLKDPQLAVEQFSVPQAIPAELSAVVAALDL
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
Organism=Escherichia coli, GI2367138, Length=321, Percent_Identity=28.6604361370716, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1790207, Length=313, Percent_Identity=28.7539936102236, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 37739; Mature: 37608
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLTTHASAVPLLERYRQFLPITAQTPIVTLHEGNTPLINVPRLAAHLGVRELWLKLES CCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEECCHHHHHHCHHHHHHHHCC MNPTGSFKDRGMVMAIAKALEAGSKAVVCASTGNTSAAAAAYAARMGMECVVVVPAGKIA CCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCHH LGKLAQALMYGAKLLVIEGNFDQALDMVRVLAEQHPITLVNSVNPYRLEGQATAAYEICD HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCEEECCCCHHHHHHHH VLGDAPDYLALPVGNAGNISAYWMGFKRYYEAHRSESLPKILGFEATGSAAIVRGEPIAY HHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCEEEEECCCCCC PETVATAIRIGNPASWQLAVNARDESEGTIDHVSDEEILAAWRDLSALEGIFCEPASAAG HHHHHHHEECCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCH VAGIRKLLAAGSIDPNGRFVAVLTGHGLKDPQLAVEQFSVPQAIPAELSAVVAALDL HHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure SQLTTHASAVPLLERYRQFLPITAQTPIVTLHEGNTPLINVPRLAAHLGVRELWLKLES CCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEECCHHHHHHCHHHHHHHHCC MNPTGSFKDRGMVMAIAKALEAGSKAVVCASTGNTSAAAAAYAARMGMECVVVVPAGKIA CCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCHH LGKLAQALMYGAKLLVIEGNFDQALDMVRVLAEQHPITLVNSVNPYRLEGQATAAYEICD HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCEEECCCCHHHHHHHH VLGDAPDYLALPVGNAGNISAYWMGFKRYYEAHRSESLPKILGFEATGSAAIVRGEPIAY HHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCEEEEECCCCCC PETVATAIRIGNPASWQLAVNARDESEGTIDHVSDEEILAAWRDLSALEGIFCEPASAAG HHHHHHHEECCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCH VAGIRKLLAAGSIDPNGRFVAVLTGHGLKDPQLAVEQFSVPQAIPAELSAVVAALDL HHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3098560; 9384377; 3139660 [H]