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The map label for this gene is fadF [H]

Identifier: 159900971

GI number: 159900971

Start: 5699576

End: 5701834

Strand: Direct

Name: fadF [H]

Synonym: Haur_4458

Alternate gene names: 159900971

Gene position: 5699576-5701834 (Clockwise)

Preceding gene: 159900951

Following gene: 159900976

Centisome position: 89.81

GC content: 51.53

Gene sequence:

>2259_bases
ATGCACGAGATTCTATTTAACAGCCAAGTTATCGCCGTTCGCGAGATTTACTGGAACTTACCGCATGCGGTTGAGTATGT
GTTGTACTTGTTTGCCATCGCCTCAATTGGCACGATGTTCTACAAGATGTATCAAGACATTCTGTTGTGGCGACGCGGCC
ATGCAACAGTGCGCTCGACCAATTTTGCCAGTCGCTTGTGGTTAACGACGACCGAGGTTTTTGGGCAGAAGCGCGTTTTG
CGTGACCGTACCCCGGGCATCATGCACACCTTTATCTTCTACGGCTTTTTGGCGCTGTTTATCGGCACCGATATCATCGC
CGCTGAAGCCGACTTCACCATTCCAATTGCTGGTGAAGAGCAAGGCAAGATTTTAACTGGTGGCTTTTATCAATATTATG
AACTGATTCTCGATGTAATGGGGATGGTTTTTCTCGCTGGTTTGCTCTGGGCGTTGTGGCGACGCTACAAAACCAAACCA
ACCCGCTTGGATAATCGTCGAACCGATGCTTGGGTGCTTTGGTCGATGATTTTCATTGTGGTTGGTGGCTACTTTATTGA
AATTTTACGCTTGGCCAACCAAACCATGACCGTTGGCGAGGGTGCAGATGCCGTCACCGCGATCGTCTATGAGCAAGGTT
GGGCCAAATGGGCGATCTTTGGTTATCCTGGGGCTAGCGTAGCCCGAGCAATTGGCCTCGGTGTCGAACGCGCCACTGAT
GGCACAATTGTGCATAGCCAAGTGGCTTTGTGGATTCACCGCGTGCTCTGGTTGAGCCATATGGCGGTGGTTTTTGCCTT
TGTTGGCTCAATTCCCTTCACCAAATTCCGCCACATTTTCTATACCCCGCTCAACACCTTGTTCCGCGATCGCGACCCCA
AAGGTGCGCTCGATCGAATTCCAAATATGGAAGAGGAACTAGAAAAAGATGAGCCAAAATTGGGGATTACCACGCTGAGC
GACTTCTCATGGAAGCGCCGCATGGATTTTGATGCCTGTATGCGCTGTGGGCGTTGTCAGGATAATTGTCCGGCGTTTGC
CTCTGGCTCCGAGCTTTCGCCCAAATGGCTAATCACCAAGATGAGCGATTTGATGCATGGTGGTCCAGTGATGAAGCGCG
ATGGCACAGTGGTGATGGTTCAGCCTGCTGGCGCAACCGCAACTGCCCCAACCACCAGCAATGGCGTAAAAATCGAATTG
CTGGAAGGCACGCCCGAAACCTTGCCATTGTATGAACATGGCATTGTCACCGAAAACGAACTTTGGGCTTGTACCACCTG
TCGCGCGTGTATGACCGAGTGTCCCGCAACGATTGAACATGTCGATGACATTATCGATTTCCGCCGCAACTTGACCATGG
TGATGGGCGAAATTCCATCGGGGGTCAAAACGGTATTGCAAGGGATCGAGCGCAACGGCAACCCATGGAAGTTGCCACAA
CGCCAGCGTACCGCTTGGGCCGATGGCCTCGAAGTGCCAACCTTGGCCGAAAAAGAAGAAGCCGAGGTATTGTACTGGGT
TGGTTGTGCGCCATCGTATGATGATCGCTCGAAGAAAACCGCCCGTGCTATGGTTCAACTGATGCAAAAAGCTGGGGTCG
ATTTCGCCATTCTTGGCGATGAAGAAACCTGTACTGGCGACCCAGCTCGGCGCATGGGCGAGGAATTGTTGTACGAACAG
CAAGCCAATACCAACATCGAAACCATGGGCCAATACAAATTCAAGAAGATCGTCACCACCTGTGCCCACTGCTATAACAC
CGTCAAAAATGAGTATCCGCAGTTTGGCGGCAAAGCTGGCGTGGATTATGAGGTAGTGCATCATACCGAATTCTTGAACG
ATTTGGTTGAAGCTGGCAAGCTCAACCCAACCGTGCCAGTCAACGAAAAGGTTGTGTACCACGACCCCTGTTACATTGGC
CGCTACAACGATATTTACGAAGAGCCTCGCAATGTGCTAAATAGCATCCCTGGCTTGGAGTTGGTCGAAGCTGGCCCGCG
CAATCGTGAAAAAGCCATGTGCTGTGGTGGTGGTGGTGGTAACGCTTGGCTCGAAGGCTTTGGCGATAAACATGTCAATG
TGATTCGGCTTGAGCAACTGCAAACCGAAAAGCCCGATACTGTGGCGATGGGCTGCCCCTTCTGTATGGTGATGTTCGAG
GATGCCGCCAAGAACACCAATCAATCAGAAACCTTGGGCCGCAAAGATGTGGCTGAAATTCTGCTGCAATCGGTTGGTGA
GCAACCACCCGCCGCCTAA

Upstream 100 bases:

>100_bases
AAACGTTTGACGCATGATGTCATGCGTGCTAAACTCGGCGTATCCTCTTTTGTAATACAATAGACCCACACCGTGTTCAC
CAGTTCGATGAGGAACGCCT

Downstream 100 bases:

>100_bases
ACTACGTGCGACTTAAACAAAAACAGCGCTTTCCAAATTGATGGAAAGCGCTGTTTTATTACTCAAAGATTAGATAATCA
TTGGGATTTAAGTTTGCGCC

Product: hypothetical protein

Products: FADH2; dihydroxy-acetone-phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 752; Mature: 752

Protein sequence:

>752_residues
MHEILFNSQVIAVREIYWNLPHAVEYVLYLFAIASIGTMFYKMYQDILLWRRGHATVRSTNFASRLWLTTTEVFGQKRVL
RDRTPGIMHTFIFYGFLALFIGTDIIAAEADFTIPIAGEEQGKILTGGFYQYYELILDVMGMVFLAGLLWALWRRYKTKP
TRLDNRRTDAWVLWSMIFIVVGGYFIEILRLANQTMTVGEGADAVTAIVYEQGWAKWAIFGYPGASVARAIGLGVERATD
GTIVHSQVALWIHRVLWLSHMAVVFAFVGSIPFTKFRHIFYTPLNTLFRDRDPKGALDRIPNMEEELEKDEPKLGITTLS
DFSWKRRMDFDACMRCGRCQDNCPAFASGSELSPKWLITKMSDLMHGGPVMKRDGTVVMVQPAGATATAPTTSNGVKIEL
LEGTPETLPLYEHGIVTENELWACTTCRACMTECPATIEHVDDIIDFRRNLTMVMGEIPSGVKTVLQGIERNGNPWKLPQ
RQRTAWADGLEVPTLAEKEEAEVLYWVGCAPSYDDRSKKTARAMVQLMQKAGVDFAILGDEETCTGDPARRMGEELLYEQ
QANTNIETMGQYKFKKIVTTCAHCYNTVKNEYPQFGGKAGVDYEVVHHTEFLNDLVEAGKLNPTVPVNEKVVYHDPCYIG
RYNDIYEEPRNVLNSIPGLELVEAGPRNREKAMCCGGGGGNAWLEGFGDKHVNVIRLEQLQTEKPDTVAMGCPFCMVMFE
DAAKNTNQSETLGRKDVAEILLQSVGEQPPAA

Sequences:

>Translated_752_residues
MHEILFNSQVIAVREIYWNLPHAVEYVLYLFAIASIGTMFYKMYQDILLWRRGHATVRSTNFASRLWLTTTEVFGQKRVL
RDRTPGIMHTFIFYGFLALFIGTDIIAAEADFTIPIAGEEQGKILTGGFYQYYELILDVMGMVFLAGLLWALWRRYKTKP
TRLDNRRTDAWVLWSMIFIVVGGYFIEILRLANQTMTVGEGADAVTAIVYEQGWAKWAIFGYPGASVARAIGLGVERATD
GTIVHSQVALWIHRVLWLSHMAVVFAFVGSIPFTKFRHIFYTPLNTLFRDRDPKGALDRIPNMEEELEKDEPKLGITTLS
DFSWKRRMDFDACMRCGRCQDNCPAFASGSELSPKWLITKMSDLMHGGPVMKRDGTVVMVQPAGATATAPTTSNGVKIEL
LEGTPETLPLYEHGIVTENELWACTTCRACMTECPATIEHVDDIIDFRRNLTMVMGEIPSGVKTVLQGIERNGNPWKLPQ
RQRTAWADGLEVPTLAEKEEAEVLYWVGCAPSYDDRSKKTARAMVQLMQKAGVDFAILGDEETCTGDPARRMGEELLYEQ
QANTNIETMGQYKFKKIVTTCAHCYNTVKNEYPQFGGKAGVDYEVVHHTEFLNDLVEAGKLNPTVPVNEKVVYHDPCYIG
RYNDIYEEPRNVLNSIPGLELVEAGPRNREKAMCCGGGGGNAWLEGFGDKHVNVIRLEQLQTEKPDTVAMGCPFCMVMFE
DAAKNTNQSETLGRKDVAEILLQSVGEQPPAA
>Mature_752_residues
MHEILFNSQVIAVREIYWNLPHAVEYVLYLFAIASIGTMFYKMYQDILLWRRGHATVRSTNFASRLWLTTTEVFGQKRVL
RDRTPGIMHTFIFYGFLALFIGTDIIAAEADFTIPIAGEEQGKILTGGFYQYYELILDVMGMVFLAGLLWALWRRYKTKP
TRLDNRRTDAWVLWSMIFIVVGGYFIEILRLANQTMTVGEGADAVTAIVYEQGWAKWAIFGYPGASVARAIGLGVERATD
GTIVHSQVALWIHRVLWLSHMAVVFAFVGSIPFTKFRHIFYTPLNTLFRDRDPKGALDRIPNMEEELEKDEPKLGITTLS
DFSWKRRMDFDACMRCGRCQDNCPAFASGSELSPKWLITKMSDLMHGGPVMKRDGTVVMVQPAGATATAPTTSNGVKIEL
LEGTPETLPLYEHGIVTENELWACTTCRACMTECPATIEHVDDIIDFRRNLTMVMGEIPSGVKTVLQGIERNGNPWKLPQ
RQRTAWADGLEVPTLAEKEEAEVLYWVGCAPSYDDRSKKTARAMVQLMQKAGVDFAILGDEETCTGDPARRMGEELLYEQ
QANTNIETMGQYKFKKIVTTCAHCYNTVKNEYPQFGGKAGVDYEVVHHTEFLNDLVEAGKLNPTVPVNEKVVYHDPCYIG
RYNDIYEEPRNVLNSIPGLELVEAGPRNREKAMCCGGGGGNAWLEGFGDKHVNVIRLEQLQTEKPDTVAMGCPFCMVMFE
DAAKNTNQSETLGRKDVAEILLQSVGEQPPAA

Specific function: Electron Transfer Protein; May Also Function As The Membrane Anchor For The Glpab Dimer. [C]

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 84541; Mature: 84541

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHEILFNSQVIAVREIYWNLPHAVEYVLYLFAIASIGTMFYKMYQDILLWRRGHATVRST
CCCCEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC
NFASRLWLTTTEVFGQKRVLRDRTPGIMHTFIFYGFLALFIGTDIIAAEADFTIPIAGEE
CCHHHHHEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHEEECCCEEEEECCCC
QGKILTGGFYQYYELILDVMGMVFLAGLLWALWRRYKTKPTRLDNRRTDAWVLWSMIFIV
CCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
VGGYFIEILRLANQTMTVGEGADAVTAIVYEQGWAKWAIFGYPGASVARAIGLGVERATD
HHHHHHHHHHHHCCCEECCCCCCHHHHHEECCCCCEEEEEECCCHHHHHHHHCCCCCCCC
GTIVHSQVALWIHRVLWLSHMAVVFAFVGSIPFTKFRHIFYTPLNTLFRDRDPKGALDRI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHC
PNMEEELEKDEPKLGITTLSDFSWKRRMDFDACMRCGRCQDNCPAFASGSELSPKWLITK
CCCHHHHHCCCCCEEEEECCCCCHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
MSDLMHGGPVMKRDGTVVMVQPAGATATAPTTSNGVKIELLEGTPETLPLYEHGIVTENE
HHHHHCCCCCEECCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCHHCCCCCCCC
LWACTTCRACMTECPATIEHVDDIIDFRRNLTMVMGEIPSGVKTVLQGIERNGNPWKLPQ
CEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC
RQRTAWADGLEVPTLAEKEEAEVLYWVGCAPSYDDRSKKTARAMVQLMQKAGVDFAILGD
HHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEECC
EETCTGDPARRMGEELLYEQQANTNIETMGQYKFKKIVTTCAHCYNTVKNEYPQFGGKAG
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
VDYEVVHHTEFLNDLVEAGKLNPTVPVNEKVVYHDPCYIGRYNDIYEEPRNVLNSIPGLE
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCEEECCCHHHHHHHHHHHHHCCCCE
LVEAGPRNREKAMCCGGGGGNAWLEGFGDKHVNVIRLEQLQTEKPDTVAMGCPFCMVMFE
EECCCCCCCCCEEEECCCCCCHHHHCCCCCCEEEEEEHHHCCCCCCEEEECCHHHHHHHH
DAAKNTNQSETLGRKDVAEILLQSVGEQPPAA
HHHCCCCCHHHCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MHEILFNSQVIAVREIYWNLPHAVEYVLYLFAIASIGTMFYKMYQDILLWRRGHATVRST
CCCCEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC
NFASRLWLTTTEVFGQKRVLRDRTPGIMHTFIFYGFLALFIGTDIIAAEADFTIPIAGEE
CCHHHHHEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHEEECCCEEEEECCCC
QGKILTGGFYQYYELILDVMGMVFLAGLLWALWRRYKTKPTRLDNRRTDAWVLWSMIFIV
CCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
VGGYFIEILRLANQTMTVGEGADAVTAIVYEQGWAKWAIFGYPGASVARAIGLGVERATD
HHHHHHHHHHHHCCCEECCCCCCHHHHHEECCCCCEEEEEECCCHHHHHHHHCCCCCCCC
GTIVHSQVALWIHRVLWLSHMAVVFAFVGSIPFTKFRHIFYTPLNTLFRDRDPKGALDRI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHC
PNMEEELEKDEPKLGITTLSDFSWKRRMDFDACMRCGRCQDNCPAFASGSELSPKWLITK
CCCHHHHHCCCCCEEEEECCCCCHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
MSDLMHGGPVMKRDGTVVMVQPAGATATAPTTSNGVKIELLEGTPETLPLYEHGIVTENE
HHHHHCCCCCEECCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCHHCCCCCCCC
LWACTTCRACMTECPATIEHVDDIIDFRRNLTMVMGEIPSGVKTVLQGIERNGNPWKLPQ
CEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC
RQRTAWADGLEVPTLAEKEEAEVLYWVGCAPSYDDRSKKTARAMVQLMQKAGVDFAILGD
HHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEECC
EETCTGDPARRMGEELLYEQQANTNIETMGQYKFKKIVTTCAHCYNTVKNEYPQFGGKAG
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
VDYEVVHHTEFLNDLVEAGKLNPTVPVNEKVVYHDPCYIGRYNDIYEEPRNVLNSIPGLE
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCEEECCCHHHHHHHHHHHHHCCCCE
LVEAGPRNREKAMCCGGGGGNAWLEGFGDKHVNVIRLEQLQTEKPDTVAMGCPFCMVMFE
EECCCCCCCCCEEEECCCCCCHHHHCCCCCCEEEEEEHHHCCCCCCEEEECCHHHHHHHH
DAAKNTNQSETLGRKDVAEILLQSVGEQPPAA
HHHCCCCCHHHCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: FAD; glycerol-3-phosphate [C]

Specific reaction: FAD + glycerol-3-phosphate = FADH2 + dihydroxy-acetone-phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]