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The map label for this gene is 159900040

Identifier: 159900040

GI number: 159900040

Start: 4436121

End: 4436987

Strand: Direct

Name: 159900040

Synonym: Haur_3523

Alternate gene names: NA

Gene position: 4436121-4436987 (Clockwise)

Preceding gene: 159900039

Following gene: 159900045

Centisome position: 69.9

GC content: 52.13

Gene sequence:

>867_bases
ATGGATAATGATGATATTCCAGTAGGCCGAATTTTAAGCCGCCGCGAGGCGCTCAAGCTTTTTTCAGCGGTTGGCGCAGG
CATGATGTTGGCCGCCTGTGGGAGCCAAAACTCAACTGCGACCACCGCACCAGCAGCCACCGCCACAACTGGTACAAGTG
CCGCAACCGCCATACCAACTGCAACGACTGCCGCAACCAGCATTGCCAGTTTGCCATCGTGTGTGGTCAAACCAGAGATG
ACAGTTGGGCCATATTTTGTCGATGAGCAACTCAATCGCTCGGATATTCGCAGCGAGCCATCGGATAATTCGCTACGGGC
GGGCGTGCCGCTGACCCTCAATATCAACGTTTCACAAATTAGCAGCAGCGCTTGTACGGCCTTGGCAGGGGCGATGGTCG
ATATTTGGCAATGCGATGCAGAAGGAATTTATTCGGGGGTGACTGATGCAGGCTTTCAAACTGAGGGCTTAAAGTTTTTG
CGCGGCTACCAAATAACCGATTCTAATGGCGATGCCAGCTTTACCACGATTTTCCCAGGCTGGTATCAAGGGCGCACCGT
GCATATTCATGTCAAAATTCGCACCACCAGCAACACCAACGAAGCCTATGAATTTACCTCGCAATTTTATTTCGATACCG
CCTTGACCAATGAAATTTTGGCGAATGCACCCTACAAAGCTGGGAGCCAACGCGACACCACCAACGAAAACGATATGCAC
TACGCCAATGGTGGCGAGCAAATGCTGCTTAGCTTAACCAAAACCAACGATGGCTACACCGCTGGCTTTCCAATCGCGCT
CGATTTGAGCGACGCTGAAACTGGCCAAGCTGATCGGTTTGAGCAAATGCAAGCGCCGCCACGCTAG

Upstream 100 bases:

>100_bases
TAAACATTTTCAGCGTTGAATCTTCATCGATCCTTCATCGCCACCCACGAGAATAGCTCTTGCAAAGCGGAAAGTTCTTA
GCGACGAAGGAGCAGCAACG

Downstream 100 bases:

>100_bases
CGTTCCCTCACCCCCTAGCCCCCTCTCCCGCCAAGCGAGCGAGGGGGAATTATTGCATCATGAAGCGTGGCACTCCCCTC
GCCCGCCGCCGTGGGAGAGG

Product: intradiol ring-cleavage dioxygenase

Products: NA

Alternate protein names: Dioxygenase; Protocatechuate Dioxygenase; Twin-Arginine Translocation Pathway Signal; Protocatechuate 3 4-Dioxygenase Beta Chain; Protocatechuate 3 4-Dioxygenase; Catechol 1 2-Dioxygenase; Dioxygenase Subfamily Protein; Protocatechuate 3 4-Dioxygenase Beta Subunit Like Protein; Protocatechuate 3,4-Dioxygenase Protein Beta Chain; Intradiol-Dioxygenase-Like Protein; Protocatechuate 3 4-Dioxygenase Beta Subunit; Protocatechuate 3 4-Dioxygenase Subunit Beta-Like Protein; Protocatechuate 3 4-Dioxygenase Subunit Beta; Ring-Cleaving Dioxygenase Protein; Intradiol Dioxygenase

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MDNDDIPVGRILSRREALKLFSAVGAGMMLAACGSQNSTATTAPAATATTGTSAATAIPTATTAATSIASLPSCVVKPEM
TVGPYFVDEQLNRSDIRSEPSDNSLRAGVPLTLNINVSQISSSACTALAGAMVDIWQCDAEGIYSGVTDAGFQTEGLKFL
RGYQITDSNGDASFTTIFPGWYQGRTVHIHVKIRTTSNTNEAYEFTSQFYFDTALTNEILANAPYKAGSQRDTTNENDMH
YANGGEQMLLSLTKTNDGYTAGFPIALDLSDAETGQADRFEQMQAPPR

Sequences:

>Translated_288_residues
MDNDDIPVGRILSRREALKLFSAVGAGMMLAACGSQNSTATTAPAATATTGTSAATAIPTATTAATSIASLPSCVVKPEM
TVGPYFVDEQLNRSDIRSEPSDNSLRAGVPLTLNINVSQISSSACTALAGAMVDIWQCDAEGIYSGVTDAGFQTEGLKFL
RGYQITDSNGDASFTTIFPGWYQGRTVHIHVKIRTTSNTNEAYEFTSQFYFDTALTNEILANAPYKAGSQRDTTNENDMH
YANGGEQMLLSLTKTNDGYTAGFPIALDLSDAETGQADRFEQMQAPPR
>Mature_288_residues
MDNDDIPVGRILSRREALKLFSAVGAGMMLAACGSQNSTATTAPAATATTGTSAATAIPTATTAATSIASLPSCVVKPEM
TVGPYFVDEQLNRSDIRSEPSDNSLRAGVPLTLNINVSQISSSACTALAGAMVDIWQCDAEGIYSGVTDAGFQTEGLKFL
RGYQITDSNGDASFTTIFPGWYQGRTVHIHVKIRTTSNTNEAYEFTSQFYFDTALTNEILANAPYKAGSQRDTTNENDMH
YANGGEQMLLSLTKTNDGYTAGFPIALDLSDAETGQADRFEQMQAPPR

Specific function: Unknown

COG id: COG3485

COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30662; Mature: 30662

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNDDIPVGRILSRREALKLFSAVGAGMMLAACGSQNSTATTAPAATATTGTSAATAIPT
CCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
ATTAATSIASLPSCVVKPEMTVGPYFVDEQLNRSDIRSEPSDNSLRAGVPLTLNINVSQI
HHHHHHHHHHCCHHEECCCCCCCCEEECCCCCHHHCCCCCCCCCEECCCCEEEEEEHHHH
SSSACTALAGAMVDIWQCDAEGIYSGVTDAGFQTEGLKFLRGYQITDSNGDASFTTIFPG
CCHHHHHHHHHHHEEEECCCHHHHCCCCCCCCCCCCHHHHHCEEEECCCCCEEEEEECCC
WYQGRTVHIHVKIRTTSNTNEAYEFTSQFYFDTALTNEILANAPYKAGSQRDTTNENDMH
CCCCCEEEEEEEEEECCCCCHHHHHHHHHEEHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
YANGGEQMLLSLTKTNDGYTAGFPIALDLSDAETGQADRFEQMQAPPR
ECCCCCEEEEEEEECCCCEECCCEEEEECCCCCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MDNDDIPVGRILSRREALKLFSAVGAGMMLAACGSQNSTATTAPAATATTGTSAATAIPT
CCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
ATTAATSIASLPSCVVKPEMTVGPYFVDEQLNRSDIRSEPSDNSLRAGVPLTLNINVSQI
HHHHHHHHHHCCHHEECCCCCCCCEEECCCCCHHHCCCCCCCCCEECCCCEEEEEEHHHH
SSSACTALAGAMVDIWQCDAEGIYSGVTDAGFQTEGLKFLRGYQITDSNGDASFTTIFPG
CCHHHHHHHHHHHEEEECCCHHHHCCCCCCCCCCCCHHHHHCEEEECCCCCEEEEEECCC
WYQGRTVHIHVKIRTTSNTNEAYEFTSQFYFDTALTNEILANAPYKAGSQRDTTNENDMH
CCCCCEEEEEEEEEECCCCCHHHHHHHHHEEHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
YANGGEQMLLSLTKTNDGYTAGFPIALDLSDAETGQADRFEQMQAPPR
ECCCCCEEEEEEEECCCCEECCCEEEEECCCCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA