Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159900039
Identifier: 159900039
GI number: 159900039
Start: 4435643
End: 4436023
Strand: Direct
Name: 159900039
Synonym: Haur_3522
Alternate gene names: NA
Gene position: 4435643-4436023 (Clockwise)
Preceding gene: 159900038
Following gene: 159900040
Centisome position: 69.89
GC content: 54.07
Gene sequence:
>381_bases ATGAGTTTGCATCCCCAAGCAGTCCATTTTCCCATTGCACTCTTGCTGGTTAGCTCAATTTTGACCCTCTGGAACGAACG CCGCCCGCACCACGAGCTGGCGATTACCGCTCGTTGGTGCTTGAAAATCGGCTGGTGGAGCAGCTTGCTGGCAGTAATGA CGGGTATTTTAGCCGCCGCCCTAGCCTTCGATCAGATTCGCCAGCAATTGACTTGGATCAATAGCCACGCAGTGGTTAGC CTTAGCTTGGTGGCGGTTTATTGGCGTTTAGTGTTAGGCAAGCCATTGCCTGCCGCCGCCCAAAAGCGCCGTCATCTGCT GGGAATTGGGCTAATCGTGCTAGCAGGTTGGCTTGGAGGCCAATTGAGCGAGCGAATCTAA
Upstream 100 bases:
>100_bases CAGTGCTGCCCAAGCCATTTGAATCGCAGGTGTTGGGCGAAACCATCGGTTTTTTGCTGAATAATCGCGCCAAACTAGCC AATAATATGGAGAACTAAGC
Downstream 100 bases:
>100_bases ACATTTTCAGCGTTGAATCTTCATCGATCCTTCATCGCCACCCACGAGAATAGCTCTTGCAAAGCGGAAAGTTCTTAGCG ACGAAGGAGCAGCAACGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MSLHPQAVHFPIALLLVSSILTLWNERRPHHELAITARWCLKIGWWSSLLAVMTGILAAALAFDQIRQQLTWINSHAVVS LSLVAVYWRLVLGKPLPAAAQKRRHLLGIGLIVLAGWLGGQLSERI
Sequences:
>Translated_126_residues MSLHPQAVHFPIALLLVSSILTLWNERRPHHELAITARWCLKIGWWSSLLAVMTGILAAALAFDQIRQQLTWINSHAVVS LSLVAVYWRLVLGKPLPAAAQKRRHLLGIGLIVLAGWLGGQLSERI >Mature_125_residues SLHPQAVHFPIALLLVSSILTLWNERRPHHELAITARWCLKIGWWSSLLAVMTGILAAALAFDQIRQQLTWINSHAVVSL SLVAVYWRLVLGKPLPAAAQKRRHLLGIGLIVLAGWLGGQLSERI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14037; Mature: 13906
Theoretical pI: Translated: 11.79; Mature: 11.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLHPQAVHFPIALLLVSSILTLWNERRPHHELAITARWCLKIGWWSSLLAVMTGILAAA CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAFDQIRQQLTWINSHAVVSLSLVAVYWRLVLGKPLPAAAQKRRHLLGIGLIVLAGWLGG HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC QLSERI HHHCCC >Mature Secondary Structure SLHPQAVHFPIALLLVSSILTLWNERRPHHELAITARWCLKIGWWSSLLAVMTGILAAA CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAFDQIRQQLTWINSHAVVSLSLVAVYWRLVLGKPLPAAAQKRRHLLGIGLIVLAGWLGG HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC QLSERI HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA