Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899943
Identifier: 159899943
GI number: 159899943
Start: 4315599
End: 4316510
Strand: Direct
Name: 159899943
Synonym: Haur_3426
Alternate gene names: NA
Gene position: 4315599-4316510 (Clockwise)
Preceding gene: 159899942
Following gene: 159899950
Centisome position: 68.0
GC content: 53.07
Gene sequence:
>912_bases ATGTTTCAGTCGCTAGACCAACTTGAAACAGGCAGTTTATTTATTTTGACAGGGCAAGCAGGCGCAGGCAAATCGCACTT AGCCGCCAGCACCCGCCGCAGTGGCACGGTCTGGATTTTGGATACCGAGGGCGCTGCCAAGAATCTTTTGGGCAAACCTG GGGTGCACAAATCGATTCAAGCGGTGCAAACGCTCTCGCTGCAACAACTTTTGGCAGCCATGCAAGAGATTCAACGGCTT GGCAAAAGTGGCGATACAGTGGTGCTCGATTCAGTTTCTAAGGTGCTGCAAGCGATGCGTGCCCATGCACAACAACGGGC TGGCGCTGAAACCGACCGCAAAACCCAAATAGAGTTTGATGAATATGCCTCCTTCAATCGCAACCTGCAAGCGATTTATA CTGGCCTGACCGAGCTAAAACAACATGGCTTTCATGTGATTATCATCGGCCACTTGGCCAAACAATATAGCGAACAAAGC GAAGATCGCAATCATGCTGATGTGGGCTTGCGGGTGCTGGCCGACGAACATATTACCTACGAGGCCGATGCAATTATTCT CGTCGAGCGTGATGGCGATCAACGCCAGATGCGACCAATTATCAAGCCACCGCGGCCTTTGCATCTCAAATTAGGCGCAA ATTATCCCGCCAAACTTGCGACGCTCTACCCTGAACTGGCACTGGACGAGGCTTTTGGCAATAGTTCCGAGCGCACTGGC CGCCCCGTCGATGCTAGCGAAGCCGAACGGCGTTTCTTTGCCCGCTATGCCTCAGTCGTTGGCGGTAACAATTGGAACGC CGTCCAACGCTATCTTGGCCGCAAAGATAAAAAACCCAGCACAATCGAAGGCTGGATTAGCGCTGCCGAACAGGTGCGCC AAGCCCCAAACGACCAAGCCATGGCCGCCTAA
Upstream 100 bases:
>100_bases CTTGACACTTTGAAACATTTGTTCTATATTTTTTATGTAGATTGACGGATACGGGCCAGCAATGGCTATGGGTAACCGAG TTCATGAAAGGAATCGCACA
Downstream 100 bases:
>100_bases AATGGCTAAAATCACAATCCCTCGTCCAGCAAGCAACTAGACGAGGGATTTGAACTAGAGTTTATTCTGAGGCCAGTTTC TGGCCGCTAACTGTAATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MFQSLDQLETGSLFILTGQAGAGKSHLAASTRRSGTVWILDTEGAAKNLLGKPGVHKSIQAVQTLSLQQLLAAMQEIQRL GKSGDTVVLDSVSKVLQAMRAHAQQRAGAETDRKTQIEFDEYASFNRNLQAIYTGLTELKQHGFHVIIIGHLAKQYSEQS EDRNHADVGLRVLADEHITYEADAIILVERDGDQRQMRPIIKPPRPLHLKLGANYPAKLATLYPELALDEAFGNSSERTG RPVDASEAERRFFARYASVVGGNNWNAVQRYLGRKDKKPSTIEGWISAAEQVRQAPNDQAMAA
Sequences:
>Translated_303_residues MFQSLDQLETGSLFILTGQAGAGKSHLAASTRRSGTVWILDTEGAAKNLLGKPGVHKSIQAVQTLSLQQLLAAMQEIQRL GKSGDTVVLDSVSKVLQAMRAHAQQRAGAETDRKTQIEFDEYASFNRNLQAIYTGLTELKQHGFHVIIIGHLAKQYSEQS EDRNHADVGLRVLADEHITYEADAIILVERDGDQRQMRPIIKPPRPLHLKLGANYPAKLATLYPELALDEAFGNSSERTG RPVDASEAERRFFARYASVVGGNNWNAVQRYLGRKDKKPSTIEGWISAAEQVRQAPNDQAMAA >Mature_303_residues MFQSLDQLETGSLFILTGQAGAGKSHLAASTRRSGTVWILDTEGAAKNLLGKPGVHKSIQAVQTLSLQQLLAAMQEIQRL GKSGDTVVLDSVSKVLQAMRAHAQQRAGAETDRKTQIEFDEYASFNRNLQAIYTGLTELKQHGFHVIIIGHLAKQYSEQS EDRNHADVGLRVLADEHITYEADAIILVERDGDQRQMRPIIKPPRPLHLKLGANYPAKLATLYPELALDEAFGNSSERTG RPVDASEAERRFFARYASVVGGNNWNAVQRYLGRKDKKPSTIEGWISAAEQVRQAPNDQAMAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33411; Mature: 33411
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQSLDQLETGSLFILTGQAGAGKSHLAASTRRSGTVWILDTEGAAKNLLGKPGVHKSIQ CCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCEEEEEECCCHHHHHCCCCCCHHHHH AVQTLSLQQLLAAMQEIQRLGKSGDTVVLDSVSKVLQAMRAHAQQRAGAETDRKTQIEFD HHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH EYASFNRNLQAIYTGLTELKQHGFHVIIIGHLAKQYSEQSEDRNHADVGLRVLADEHITY HHHHHCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCCHHHCEEEEECCCEEE EADAIILVERDGDQRQMRPIIKPPRPLHLKLGANYPAKLATLYPELALDEAFGNSSERTG ECCEEEEEECCCCHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCC RPVDASEAERRFFARYASVVGGNNWNAVQRYLGRKDKKPSTIEGWISAAEQVRQAPNDQA CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCC MAA CCC >Mature Secondary Structure MFQSLDQLETGSLFILTGQAGAGKSHLAASTRRSGTVWILDTEGAAKNLLGKPGVHKSIQ CCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCEEEEEECCCHHHHHCCCCCCHHHHH AVQTLSLQQLLAAMQEIQRLGKSGDTVVLDSVSKVLQAMRAHAQQRAGAETDRKTQIEFD HHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH EYASFNRNLQAIYTGLTELKQHGFHVIIIGHLAKQYSEQSEDRNHADVGLRVLADEHITY HHHHHCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCCHHHCEEEEECCCEEE EADAIILVERDGDQRQMRPIIKPPRPLHLKLGANYPAKLATLYPELALDEAFGNSSERTG ECCEEEEEECCCCHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCC RPVDASEAERRFFARYASVVGGNNWNAVQRYLGRKDKKPSTIEGWISAAEQVRQAPNDQA CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCC MAA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA