Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
---|---|
Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is suhB [H]
Identifier: 159899814
GI number: 159899814
Start: 4161534
End: 4162298
Strand: Direct
Name: suhB [H]
Synonym: Haur_3296
Alternate gene names: 159899814
Gene position: 4161534-4162298 (Clockwise)
Preceding gene: 159899810
Following gene: 159899815
Centisome position: 65.57
GC content: 52.42
Gene sequence:
>765_bases ATGCGAAGTCATGCGATTGCCATTGCCAAAGCCGCAGGCCAAATTCTGCGCGATGGATTACGCAATGAGCGTCAGATTCA ACATAAAAGTGCCACCATCGATCTGGTTACCAATATCGATTTAGCCAGCGAAAAATTGATCGTCAGCCAACTGCGCGAAC AATTTCCTGATCATCGGATTGTGGCCGAAGAATCGGGCGATGATGGTCGGACCGCCGAATATTGTTGGGTGATCGATCCA CTTGATGGCACAACCAATTATGCCCACGGTTTCCCATTCTTCGCGGTTTCAATTGCCTTATTGCACAACAACCAGCCAAC AATTGGCGTGGTCTACGATCCATGGCGCGATGAATGTTTTGTCGGCGAGCGTGGGGTTGGCGCTTGGCTCAACGATCAAC TATTGCATGTCACCAATACCGATACGGTTGATGCCGCCTTGCTGAGCACTGGCTTTCCTTACACAATCCGCAGCAATCCC GATAACAACATCGCCGAATTTACCCGCATCGTGCTCAAAGCTCAAGCGATTCGCCGTGGCGGAGCCGCCGCCTTGGATAT TTGTTATGTGGCGGCTGGGCGCAGCGAAGGCCACTGGGAGCTAGGCCTCAAGCCTTGGGATACTGCCGCCGCCGCCGTGA TTTTGGCCGAAGCTGGTGGCAAACTCAGTACCTGGACTGGCGCAGATTGGAATCCATGGATTGATCGCTTGGTAGCAACC AACGGGGCAGTCCATGCCGAATTGGTTAAATTATTACAAGCCTAA
Upstream 100 bases:
>100_bases GATCAACAGCCATGGGCTTACAAGCAGAGCAATGGTACAATTGAGCCGCTGTCGCCAACGACGAGAGCACGTAGTTTTCA TAGCCCAAAGGATACCACAA
Downstream 100 bases:
>100_bases TTCACTATTGAGCCGAGAAAGCTCTTGCATCTGACAAGAGCTTTTGTGTTGTGTTGATTTCCCTCACCCCCTCGCCCCCT CTCCCGCCTAGCAGGCGAGG
Product: inositol monophosphatase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MRSHAIAIAKAAGQILRDGLRNERQIQHKSATIDLVTNIDLASEKLIVSQLREQFPDHRIVAEESGDDGRTAEYCWVIDP LDGTTNYAHGFPFFAVSIALLHNNQPTIGVVYDPWRDECFVGERGVGAWLNDQLLHVTNTDTVDAALLSTGFPYTIRSNP DNNIAEFTRIVLKAQAIRRGGAAALDICYVAAGRSEGHWELGLKPWDTAAAAVILAEAGGKLSTWTGADWNPWIDRLVAT NGAVHAELVKLLQA
Sequences:
>Translated_254_residues MRSHAIAIAKAAGQILRDGLRNERQIQHKSATIDLVTNIDLASEKLIVSQLREQFPDHRIVAEESGDDGRTAEYCWVIDP LDGTTNYAHGFPFFAVSIALLHNNQPTIGVVYDPWRDECFVGERGVGAWLNDQLLHVTNTDTVDAALLSTGFPYTIRSNP DNNIAEFTRIVLKAQAIRRGGAAALDICYVAAGRSEGHWELGLKPWDTAAAAVILAEAGGKLSTWTGADWNPWIDRLVAT NGAVHAELVKLLQA >Mature_254_residues MRSHAIAIAKAAGQILRDGLRNERQIQHKSATIDLVTNIDLASEKLIVSQLREQFPDHRIVAEESGDDGRTAEYCWVIDP LDGTTNYAHGFPFFAVSIALLHNNQPTIGVVYDPWRDECFVGERGVGAWLNDQLLHVTNTDTVDAALLSTGFPYTIRSNP DNNIAEFTRIVLKAQAIRRGGAAALDICYVAAGRSEGHWELGLKPWDTAAAAVILAEAGGKLSTWTGADWNPWIDRLVAT NGAVHAELVKLLQA
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI5031789, Length=255, Percent_Identity=34.9019607843137, Blast_Score=170, Evalue=1e-42, Organism=Homo sapiens, GI221625487, Length=255, Percent_Identity=34.9019607843137, Blast_Score=170, Evalue=1e-42, Organism=Homo sapiens, GI7657236, Length=251, Percent_Identity=36.2549800796813, Blast_Score=157, Evalue=6e-39, Organism=Homo sapiens, GI221625507, Length=142, Percent_Identity=37.3239436619718, Blast_Score=115, Evalue=3e-26, Organism=Escherichia coli, GI1788882, Length=243, Percent_Identity=38.6831275720165, Blast_Score=177, Evalue=6e-46, Organism=Caenorhabditis elegans, GI193202572, Length=263, Percent_Identity=32.319391634981, Blast_Score=130, Evalue=6e-31, Organism=Caenorhabditis elegans, GI193202570, Length=239, Percent_Identity=30.9623430962343, Blast_Score=130, Evalue=7e-31, Organism=Saccharomyces cerevisiae, GI6320493, Length=220, Percent_Identity=33.1818181818182, Blast_Score=126, Evalue=4e-30, Organism=Saccharomyces cerevisiae, GI6321836, Length=247, Percent_Identity=27.1255060728745, Blast_Score=112, Evalue=6e-26, Organism=Drosophila melanogaster, GI24664926, Length=244, Percent_Identity=32.3770491803279, Blast_Score=142, Evalue=3e-34, Organism=Drosophila melanogaster, GI21357329, Length=228, Percent_Identity=35.0877192982456, Blast_Score=140, Evalue=1e-33, Organism=Drosophila melanogaster, GI24664922, Length=234, Percent_Identity=32.0512820512821, Blast_Score=135, Evalue=3e-32, Organism=Drosophila melanogaster, GI21357303, Length=254, Percent_Identity=29.9212598425197, Blast_Score=123, Evalue=1e-28, Organism=Drosophila melanogaster, GI21357957, Length=236, Percent_Identity=28.3898305084746, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI24664918, Length=258, Percent_Identity=27.906976744186, Blast_Score=98, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 27763; Mature: 27763
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSHAIAIAKAAGQILRDGLRNERQIQHKSATIDLVTNIDLASEKLIVSQLREQFPDHRI CCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEE VAEESGDDGRTAEYCWVIDPLDGTTNYAHGFPFFAVSIALLHNNQPTIGVVYDPWRDECF EEECCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHEEEEEECCCCEEEEEECCCCCCEE VGERGVGAWLNDQLLHVTNTDTVDAALLSTGFPYTIRSNPDNNIAEFTRIVLKAQAIRRG ECCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC GAAALDICYVAAGRSEGHWELGLKPWDTAAAAVILAEAGGKLSTWTGADWNPWIDRLVAT CCHHEEEEEEECCCCCCCEEECCCCCCHHHEEEEEECCCCCEEECCCCCCCHHHHHHHHC NGAVHAELVKLLQA CCCHHHHHHHHHCC >Mature Secondary Structure MRSHAIAIAKAAGQILRDGLRNERQIQHKSATIDLVTNIDLASEKLIVSQLREQFPDHRI CCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEE VAEESGDDGRTAEYCWVIDPLDGTTNYAHGFPFFAVSIALLHNNQPTIGVVYDPWRDECF EEECCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHEEEEEECCCCEEEEEECCCCCCEE VGERGVGAWLNDQLLHVTNTDTVDAALLSTGFPYTIRSNPDNNIAEFTRIVLKAQAIRRG ECCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC GAAALDICYVAAGRSEGHWELGLKPWDTAAAAVILAEAGGKLSTWTGADWNPWIDRLVAT CCHHEEEEEEECCCCCCCEEECCCCCCHHHEEEEEECCCCCEEECCCCCCCHHHHHHHHC NGAVHAELVKLLQA CCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]