Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899815

Identifier: 159899815

GI number: 159899815

Start: 4163389

End: 4163868

Strand: Direct

Name: 159899815

Synonym: Haur_3298

Alternate gene names: NA

Gene position: 4163389-4163868 (Clockwise)

Preceding gene: 159899814

Following gene: 159899816

Centisome position: 65.6

GC content: 53.54

Gene sequence:

>480_bases
ATGTCCGATGACAACACGTCCAGCGTTGGGCATCGACGTTGGTTGTTATACCCACCGACGCTCAAAATGGGTACAGGCGA
TGTCAAAGCCCAAACTGGCACGCTCGATGCCAATAGTTTATGGGTGGTTGGCAACACTGGCCCACGCCCTGCCACCCGCA
CCGAATATATTGCGTGGCCGCCCGCAGGCTTTGTGCCTTTTATGAATGCCTACAAACGTTGGTCGTTTAGCTTACCCAAC
GCCAATTTTGCCAATGCTGTGGTGACCATGCAAAAGAGTGGCCAGTCGCAAGCCCTGACTATCGTCTCGCGCAGCAGTGG
CAGTGGCGATAATACGATTGCTTGGGATGTTACGGGCTACAGCTCATGGCCAGCGCCTGCCACCGATATCACCTATACTG
TGAATGTGAGTAATGTGGTGCAGAATGGCCAAACTCGTTCGTTCAGCTATCAGGTCACCGTGATTGACCCAAGTCGCTAG

Upstream 100 bases:

>100_bases
GCAATTGGCTGTGCTACAGCGCCGAAGGCAGCGAAGCCGCTGGCAAATCAAACTTGGCAGCTGGGGTAACCGCCAATGGC
ACTGGCGCGATTGTTTATAC

Downstream 100 bases:

>100_bases
GGCGGATGGGCTATAGCCAAATCGCTCAATTTTTGTCAAAATTCATTAATTAATTCACTCTACACTGGAGGCATGGTATG
CAGGTGGCATCTACTTGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MSDDNTSSVGHRRWLLYPPTLKMGTGDVKAQTGTLDANSLWVVGNTGPRPATRTEYIAWPPAGFVPFMNAYKRWSFSLPN
ANFANAVVTMQKSGQSQALTIVSRSSGSGDNTIAWDVTGYSSWPAPATDITYTVNVSNVVQNGQTRSFSYQVTVIDPSR

Sequences:

>Translated_159_residues
MSDDNTSSVGHRRWLLYPPTLKMGTGDVKAQTGTLDANSLWVVGNTGPRPATRTEYIAWPPAGFVPFMNAYKRWSFSLPN
ANFANAVVTMQKSGQSQALTIVSRSSGSGDNTIAWDVTGYSSWPAPATDITYTVNVSNVVQNGQTRSFSYQVTVIDPSR
>Mature_158_residues
SDDNTSSVGHRRWLLYPPTLKMGTGDVKAQTGTLDANSLWVVGNTGPRPATRTEYIAWPPAGFVPFMNAYKRWSFSLPNA
NFANAVVTMQKSGQSQALTIVSRSSGSGDNTIAWDVTGYSSWPAPATDITYTVNVSNVVQNGQTRSFSYQVTVIDPSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17284; Mature: 17153

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDNTSSVGHRRWLLYPPTLKMGTGDVKAQTGTLDANSLWVVGNTGPRPATRTEYIAWP
CCCCCCCCCCCEEEEEECCCEEECCCCCEEEECCCCCCCEEEEECCCCCCCCCCEEEEEC
PAGFVPFMNAYKRWSFSLPNANFANAVVTMQKSGQSQALTIVSRSSGSGDNTIAWDVTGY
CCCCHHHHHHHHCEEEECCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEECCC
SSWPAPATDITYTVNVSNVVQNGQTRSFSYQVTVIDPSR
CCCCCCCCCEEEEEEHHHHHCCCCCCEEEEEEEEECCCC
>Mature Secondary Structure 
SDDNTSSVGHRRWLLYPPTLKMGTGDVKAQTGTLDANSLWVVGNTGPRPATRTEYIAWP
CCCCCCCCCCEEEEEECCCEEECCCCCEEEECCCCCCCEEEEECCCCCCCCCCEEEEEC
PAGFVPFMNAYKRWSFSLPNANFANAVVTMQKSGQSQALTIVSRSSGSGDNTIAWDVTGY
CCCCHHHHHHHHCEEEECCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEECCC
SSWPAPATDITYTVNVSNVVQNGQTRSFSYQVTVIDPSR
CCCCCCCCCEEEEEEHHHHHCCCCCCEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA