Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899810
Identifier: 159899810
GI number: 159899810
Start: 4156658
End: 4157212
Strand: Direct
Name: 159899810
Synonym: Haur_3292
Alternate gene names: NA
Gene position: 4156658-4157212 (Clockwise)
Preceding gene: 159899809
Following gene: 159899814
Centisome position: 65.49
GC content: 50.63
Gene sequence:
>555_bases ATGCAAACATTGCAACGCTGGATCATTCTTTTTCGTGGAATGTTTATCGCCAGCTTGATTCTCGTGAGCCTTGTGCCATT GCGACCAGCAGCGGCGCATTTTGGCGAACCCTATACGGTGTTGTATGATCAAAAAATCGGTGAGTTTACGCTCTCGATGA AGGCCGACCCCGATGTGGGCACTGGCACGTTTTATAGCGATATTGAGCTACCAGCCAACATGAACGATGGCGAAGTAACG ATTGCGATTCAAGCGGTAGCCGATGCCAACAGCACCGGGCCAAGCAGTTCGAGCGCTAGTAGTCAAAGCAGCAGCCACAA AGCCAGCATCGAACAAACCATCGAATTTGATCAAGAGGGCTATTGGACACTTGATGTAACCGTGACTGCGGGCGAGAGCA CGGGTAAGCATCAATTTAAAGTGCTGGTCACCCCGCCATTTCCACCGTGGATCACCACGCTGATTTGTTTAGCACCATTT TTGGTGGTCGCGGCAATTTGGACCTTGACCATGCGCCGCAATGCCCTGCTCAAACAACAACAATCTGAGAACTAG
Upstream 100 bases:
>100_bases TGGCTGCCGTGGGCGCTGGTCATCGTAGCGATGGCTGGCAGTGCGATGTGGCTGCTAAGCCAACCAATGGATATGCGTGG GATTCTAGAAGGATAATTGT
Downstream 100 bases:
>100_bases AAACATCAGGACAAGGAATCAGGGGCTAGGTTGGTTCATAGCATTAACAACCGCCAGCGTTCCCTCACCCCCTGTCCCCG CTCCCGCATGCGAGGGGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MQTLQRWIILFRGMFIASLILVSLVPLRPAAAHFGEPYTVLYDQKIGEFTLSMKADPDVGTGTFYSDIELPANMNDGEVT IAIQAVADANSTGPSSSSASSQSSSHKASIEQTIEFDQEGYWTLDVTVTAGESTGKHQFKVLVTPPFPPWITTLICLAPF LVVAAIWTLTMRRNALLKQQQSEN
Sequences:
>Translated_184_residues MQTLQRWIILFRGMFIASLILVSLVPLRPAAAHFGEPYTVLYDQKIGEFTLSMKADPDVGTGTFYSDIELPANMNDGEVT IAIQAVADANSTGPSSSSASSQSSSHKASIEQTIEFDQEGYWTLDVTVTAGESTGKHQFKVLVTPPFPPWITTLICLAPF LVVAAIWTLTMRRNALLKQQQSEN >Mature_184_residues MQTLQRWIILFRGMFIASLILVSLVPLRPAAAHFGEPYTVLYDQKIGEFTLSMKADPDVGTGTFYSDIELPANMNDGEVT IAIQAVADANSTGPSSSSASSQSSSHKASIEQTIEFDQEGYWTLDVTVTAGESTGKHQFKVLVTPPFPPWITTLICLAPF LVVAAIWTLTMRRNALLKQQQSEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20154; Mature: 20154
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTLQRWIILFRGMFIASLILVSLVPLRPAAAHFGEPYTVLYDQKIGEFTLSMKADPDVG CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEECCCCCEEEEEECCCCCC TGTFYSDIELPANMNDGEVTIAIQAVADANSTGPSSSSASSQSSSHKASIEQTIEFDQEG CCCEEECEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC YWTLDVTVTAGESTGKHQFKVLVTPPFPPWITTLICLAPFLVVAAIWTLTMRRNALLKQQ EEEEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSEN CCCC >Mature Secondary Structure MQTLQRWIILFRGMFIASLILVSLVPLRPAAAHFGEPYTVLYDQKIGEFTLSMKADPDVG CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEECCCCCEEEEEECCCCCC TGTFYSDIELPANMNDGEVTIAIQAVADANSTGPSSSSASSQSSSHKASIEQTIEFDQEG CCCEEECEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC YWTLDVTVTAGESTGKHQFKVLVTPPFPPWITTLICLAPFLVVAAIWTLTMRRNALLKQQ EEEEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSEN CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA