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The map label for this gene is 159899809

Identifier: 159899809

GI number: 159899809

Start: 4155241

End: 4156653

Strand: Direct

Name: 159899809

Synonym: Haur_3291

Alternate gene names: NA

Gene position: 4155241-4156653 (Clockwise)

Preceding gene: 159899808

Following gene: 159899810

Centisome position: 65.47

GC content: 50.6

Gene sequence:

>1413_bases
ATGCAACAGCTTCCAGCGATTGATTTGCTGAAATTGCCAGGCTTGCGCTGGCTAGGGCGTTGGCGCTATGCCCGTTTTGC
GCTGCAAATGCCGCTATTTGCCATGGCCATGTTGATGGTTTGGGATGGCATGACTGGCGCTCAGTTGGCTCCCAAAAATA
GTGCCACCGTGCTGGTGTGGGTGCATTATCGTGGCTTTTTGATGTTGGCTTTGTTGGTGGTTGGCAATTTATTTTGTATG
GCCTGCCCATTTATGTTGCCACGCAATCTGGCACGACGCTGGCTCAAACCACGCTTCAAATGGCCAAGCTGGTTGCGCAA
CAAATGGCTAACCACGGGATTATTGGTCGCATTTTTCTTTGTCTACGAGCGCTTTGATTTGTGGGCCTCGCCGTGGTGGA
CAGCTTGGCTGATTGTGGCTTATTTTGTGGCCGCCCTGCTGATCGATAGCAGTTTTCAGGGTGCGCCATTTTGTAAATAT
GTCTGTCCGCTGGGCCAATTTAATATGTTGAGTTCAACCCTCTCGCCAATCGAAGTAGCGGTGCGCCAGCCCCAACGCTG
TCAAACCTGCCAAACCAAAGATTGCATTGTGGGGCGTGATGAGCAGCCAGGTTGTGAATTGTGGCTGTTTCAACCCAAAA
AGGTCGGCAATCTCGATTGTACGATGTGTTTGGATTGTATTCATGCCTGCCCTCACGATAATATTGGCTTGCTAGCTCGC
GTGCCAGGCCAAGAGCTAATCAGCCTAGAACCACGCTCAGGCATTGGCAAAATCGAACAACGCAGCGATTTTAGCTTGCT
GATGTTGGTGTTTACATGGGGTGCATTGCTCAACGCCTTCGGCATGATCAGCCCAGTCTATAGCTTTTACAATTGGCTCA
CCAGCCAGTTTGCCATCAGCAGCGAAACATTCTTGCTAAGTGTAGTGTTTATCTTAGCCTTGGTGATTGAGCCAGTCGCT
TTGTTGGGCGGGGCAGCATGGCTCTTTCGGCGGATTAGCGGCCATAGCGAACGCTTAATCGCGATCATCAATCGCTTTAT
GAAGGGCTTTTTGCCAATTGGCATTGCCATGTGGACAGCTCACTATGCCTTTCACTTTATCATCGGCTTTTGGACGATTC
TGCCAGTCTTGCGCTCGTTACTGGCCGAAGCAGGGATTAATTTTAGCTGGATGCCGGTAACGGGATTAAGCCCACTTGTG
CCACAAGTGATGATCTACCCATTTCAAATCGGCATGATTCTGCTGGGCAGTGTGCTTTCAGCGGTGATTACATGGCAAAC
GACAACAACTCTCACCAAACAACGCCAGCAATTGGCTTGGCTGCCGTGGGCGCTGGTCATCGTAGCGATGGCTGGCAGTG
CGATGTGGCTGCTAAGCCAACCAATGGATATGCGTGGGATTCTAGAAGGATAA

Upstream 100 bases:

>100_bases
CTCGGCGAATGGGTGTTGATCGTCAACGTCACTGAATCCAACGGTGCTGTTATGCAACGAACTTTGCCAGCCTTCAATAT
TCAATAGAGGGAGTTGAACA

Downstream 100 bases:

>100_bases
TTGTATGCAAACATTGCAACGCTGGATCATTCTTTTTCGTGGAATGTTTATCGCCAGCTTGATTCTCGTGAGCCTTGTGC
CATTGCGACCAGCAGCGGCG

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: NA

Alternate protein names: Sigma-54 Interaction Domain Family; Polyferredoxin; Polyferredoxin-Like Protein; Nitrogen Regulatory Protein; Transcriptional Regulator; Sigma-54 Factor; Cytochrome C Oxidase Subunit II; Transcriptional Regulator Protein

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MQQLPAIDLLKLPGLRWLGRWRYARFALQMPLFAMAMLMVWDGMTGAQLAPKNSATVLVWVHYRGFLMLALLVVGNLFCM
ACPFMLPRNLARRWLKPRFKWPSWLRNKWLTTGLLVAFFFVYERFDLWASPWWTAWLIVAYFVAALLIDSSFQGAPFCKY
VCPLGQFNMLSSTLSPIEVAVRQPQRCQTCQTKDCIVGRDEQPGCELWLFQPKKVGNLDCTMCLDCIHACPHDNIGLLAR
VPGQELISLEPRSGIGKIEQRSDFSLLMLVFTWGALLNAFGMISPVYSFYNWLTSQFAISSETFLLSVVFILALVIEPVA
LLGGAAWLFRRISGHSERLIAIINRFMKGFLPIGIAMWTAHYAFHFIIGFWTILPVLRSLLAEAGINFSWMPVTGLSPLV
PQVMIYPFQIGMILLGSVLSAVITWQTTTTLTKQRQQLAWLPWALVIVAMAGSAMWLLSQPMDMRGILEG

Sequences:

>Translated_470_residues
MQQLPAIDLLKLPGLRWLGRWRYARFALQMPLFAMAMLMVWDGMTGAQLAPKNSATVLVWVHYRGFLMLALLVVGNLFCM
ACPFMLPRNLARRWLKPRFKWPSWLRNKWLTTGLLVAFFFVYERFDLWASPWWTAWLIVAYFVAALLIDSSFQGAPFCKY
VCPLGQFNMLSSTLSPIEVAVRQPQRCQTCQTKDCIVGRDEQPGCELWLFQPKKVGNLDCTMCLDCIHACPHDNIGLLAR
VPGQELISLEPRSGIGKIEQRSDFSLLMLVFTWGALLNAFGMISPVYSFYNWLTSQFAISSETFLLSVVFILALVIEPVA
LLGGAAWLFRRISGHSERLIAIINRFMKGFLPIGIAMWTAHYAFHFIIGFWTILPVLRSLLAEAGINFSWMPVTGLSPLV
PQVMIYPFQIGMILLGSVLSAVITWQTTTTLTKQRQQLAWLPWALVIVAMAGSAMWLLSQPMDMRGILEG
>Mature_470_residues
MQQLPAIDLLKLPGLRWLGRWRYARFALQMPLFAMAMLMVWDGMTGAQLAPKNSATVLVWVHYRGFLMLALLVVGNLFCM
ACPFMLPRNLARRWLKPRFKWPSWLRNKWLTTGLLVAFFFVYERFDLWASPWWTAWLIVAYFVAALLIDSSFQGAPFCKY
VCPLGQFNMLSSTLSPIEVAVRQPQRCQTCQTKDCIVGRDEQPGCELWLFQPKKVGNLDCTMCLDCIHACPHDNIGLLAR
VPGQELISLEPRSGIGKIEQRSDFSLLMLVFTWGALLNAFGMISPVYSFYNWLTSQFAISSETFLLSVVFILALVIEPVA
LLGGAAWLFRRISGHSERLIAIINRFMKGFLPIGIAMWTAHYAFHFIIGFWTILPVLRSLLAEAGINFSWMPVTGLSPLV
PQVMIYPFQIGMILLGSVLSAVITWQTTTTLTKQRQQLAWLPWALVIVAMAGSAMWLLSQPMDMRGILEG

Specific function: Unknown

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53290; Mature: 53290

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQLPAIDLLKLPGLRWLGRWRYARFALQMPLFAMAMLMVWDGMTGAQLAPKNSATVLVW
CCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEE
VHYRGFLMLALLVVGNLFCMACPFMLPRNLARRWLKPRFKWPSWLRNKWLTTGLLVAFFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
VYERFDLWASPWWTAWLIVAYFVAALLIDSSFQGAPFCKYVCPLGQFNMLSSTLSPIEVA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHH
VRQPQRCQTCQTKDCIVGRDEQPGCELWLFQPKKVGNLDCTMCLDCIHACPHDNIGLLAR
HCCCHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEE
VPGQELISLEPRSGIGKIEQRSDFSLLMLVFTWGALLNAFGMISPVYSFYNWLTSQFAIS
CCCHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SETFLLSVVFILALVIEPVALLGGAAWLFRRISGHSERLIAIINRFMKGFLPIGIAMWTA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HYAFHFIIGFWTILPVLRSLLAEAGINFSWMPVTGLSPLVPQVMIYPFQIGMILLGSVLS
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AVITWQTTTTLTKQRQQLAWLPWALVIVAMAGSAMWLLSQPMDMRGILEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MQQLPAIDLLKLPGLRWLGRWRYARFALQMPLFAMAMLMVWDGMTGAQLAPKNSATVLVW
CCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEE
VHYRGFLMLALLVVGNLFCMACPFMLPRNLARRWLKPRFKWPSWLRNKWLTTGLLVAFFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
VYERFDLWASPWWTAWLIVAYFVAALLIDSSFQGAPFCKYVCPLGQFNMLSSTLSPIEVA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHH
VRQPQRCQTCQTKDCIVGRDEQPGCELWLFQPKKVGNLDCTMCLDCIHACPHDNIGLLAR
HCCCHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEE
VPGQELISLEPRSGIGKIEQRSDFSLLMLVFTWGALLNAFGMISPVYSFYNWLTSQFAIS
CCCHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SETFLLSVVFILALVIEPVALLGGAAWLFRRISGHSERLIAIINRFMKGFLPIGIAMWTA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HYAFHFIIGFWTILPVLRSLLAEAGINFSWMPVTGLSPLVPQVMIYPFQIGMILLGSVLS
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AVITWQTTTTLTKQRQQLAWLPWALVIVAMAGSAMWLLSQPMDMRGILEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA