Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is yjjL [C]
Identifier: 159899803
GI number: 159899803
Start: 4151423
End: 4152640
Strand: Direct
Name: yjjL [C]
Synonym: Haur_3285
Alternate gene names: 159899803
Gene position: 4151423-4152640 (Clockwise)
Preceding gene: 159899802
Following gene: 159899807
Centisome position: 65.41
GC content: 51.81
Gene sequence:
>1218_bases GTGCTATCGCCTAAAGCTCATCCTGCGATCAACCAAACTGGCTTACGCGCCAATCTTGGTCAATTTAGCCTGCTGATGCT GATCAACGCTATGGTCGGCGGCATGATTGGTCTAGAACGCACGATCTTGCCAATTCTTGGCAGCCAAACCTTTGGCCTGA GCAGCACCACCACTGTGTTGAGTTTTATCATCAGTTTTGGCTTGGTCAAAGCCTTAATGAACTTGATCGCCGGGGTTTTG GCTGATCGCTATGGGCGCAAACGAATTTTGGTGTTGGGTTGGCTGGTAGGCTTGCCAGTACCATGGATGTTGATTTATGC CCCAAGTTGGGGCTGGATCGTTGCCGCCAATGTGTTACTTGGGATCAACCAAGGCTTAGCTTGGTCGATGGCAGTCGTGA TGAAAATTGATTTGGTAGGGCCACAACAACGCGGGTTTGCAGTTGGCCTCAACGAATTTACAGGCTATATGGCGGTTGCC ATCACCGCTTGGCTAACTGGCTATTTAGCTAGCAGCTATGGCGTGCGGCCCGTGCCCTTTTATCTTGGCATCGGCTATGC CATCATTGGCCTAGGGCTATCGATTGGCTTGGTACGCGAAACCCATGGCTTGGTGCAGCAAACCACCAGCACGAATAGCA ATTTCTGGCAGCTTGTGCAGCAAACATCATGGGGCAATCGCACCTTGTTTGGAGCTAGTCAGGCAGGCTTGATCAACAAC CTTAACGATGGCATGGCTTGGGGCATTTTGCCGCTGTTTTTCGCTAGCTATGGGCTTGAGCTGCCAGCGATTGGCTTGCT CAAATTTATGTATCCAGCGGTTTGGAGCGTTGGCCAACTGATTACGGGGCCACTCTCCGACAAACTTGGGCGCAAAGCGC TGATTGTGCAGGGAATGTTGCTGCAAGCCGCTGCCTTGGGCTTGATTGTCAACACCACTAGTTTTGGTTGGTGGTTGCTG AGCAGCATTGGTTTGGGCATTGGCACGGCTATGGTCTACCCAACATTGATCGCCGTGGTTAGCGATAATGCAACTCCAGC CAGTCGCGCCAGAGTTTTGGGCATCTATCGCTTTTGGCGCGATCTTGGCTATGCAATCGGGGCATTGTTGGCGGGAATTA TCGCCGATTGGCTGGGTATGGCGTGGGCAATTGGCTTGGTCGCAGGCTTGACCGCAATTTCTAGCTTGTTGGCGCATTTG AATCTCAACAAAGCATAA
Upstream 100 bases:
>100_bases CCAGCAACGCCGCCGAATCATCAAACGATTGTCCAGTTGAATCAGGCTGGAGCCGCGCTACCCGACGATCTCATCACCCT CGAAGCTGGAGCCAACCGCT
Downstream 100 bases:
>100_bases AAAAGCGCTGCTCGATGATTAATCAAGCAGCGCTACCAGCATTTATTTTGCGTCGTCGATTGCACTTTGCAAAGCAGCTT GGCTGAGCGAGCTAACTTCT
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Transporter; Facilitator Family Transporter; Facilitator Superfamily Protein; Tetracyclin Resistance Protein; Transporter Facilitator Family; MFS Transporter Permease; Multidrug Drug Efflux Protein; Formamidopyrimidine-DNA Glycosylase
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MLSPKAHPAINQTGLRANLGQFSLLMLINAMVGGMIGLERTILPILGSQTFGLSSTTTVLSFIISFGLVKALMNLIAGVL ADRYGRKRILVLGWLVGLPVPWMLIYAPSWGWIVAANVLLGINQGLAWSMAVVMKIDLVGPQQRGFAVGLNEFTGYMAVA ITAWLTGYLASSYGVRPVPFYLGIGYAIIGLGLSIGLVRETHGLVQQTTSTNSNFWQLVQQTSWGNRTLFGASQAGLINN LNDGMAWGILPLFFASYGLELPAIGLLKFMYPAVWSVGQLITGPLSDKLGRKALIVQGMLLQAAALGLIVNTTSFGWWLL SSIGLGIGTAMVYPTLIAVVSDNATPASRARVLGIYRFWRDLGYAIGALLAGIIADWLGMAWAIGLVAGLTAISSLLAHL NLNKA
Sequences:
>Translated_405_residues MLSPKAHPAINQTGLRANLGQFSLLMLINAMVGGMIGLERTILPILGSQTFGLSSTTTVLSFIISFGLVKALMNLIAGVL ADRYGRKRILVLGWLVGLPVPWMLIYAPSWGWIVAANVLLGINQGLAWSMAVVMKIDLVGPQQRGFAVGLNEFTGYMAVA ITAWLTGYLASSYGVRPVPFYLGIGYAIIGLGLSIGLVRETHGLVQQTTSTNSNFWQLVQQTSWGNRTLFGASQAGLINN LNDGMAWGILPLFFASYGLELPAIGLLKFMYPAVWSVGQLITGPLSDKLGRKALIVQGMLLQAAALGLIVNTTSFGWWLL SSIGLGIGTAMVYPTLIAVVSDNATPASRARVLGIYRFWRDLGYAIGALLAGIIADWLGMAWAIGLVAGLTAISSLLAHL NLNKA >Mature_405_residues MLSPKAHPAINQTGLRANLGQFSLLMLINAMVGGMIGLERTILPILGSQTFGLSSTTTVLSFIISFGLVKALMNLIAGVL ADRYGRKRILVLGWLVGLPVPWMLIYAPSWGWIVAANVLLGINQGLAWSMAVVMKIDLVGPQQRGFAVGLNEFTGYMAVA ITAWLTGYLASSYGVRPVPFYLGIGYAIIGLGLSIGLVRETHGLVQQTTSTNSNFWQLVQQTSWGNRTLFGASQAGLINN LNDGMAWGILPLFFASYGLELPAIGLLKFMYPAVWSVGQLITGPLSDKLGRKALIVQGMLLQAAALGLIVNTTSFGWWLL SSIGLGIGTAMVYPTLIAVVSDNATPASRARVLGIYRFWRDLGYAIGALLAGIIADWLGMAWAIGLVAGLTAISSLLAHL NLNKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43194; Mature: 43194
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSPKAHPAINQTGLRANLGQFSLLMLINAMVGGMIGLERTILPILGSQTFGLSSTTTVL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH SFIISFGLVKALMNLIAGVLADRYGRKRILVLGWLVGLPVPWMLIYAPSWGWIVAANVLL HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH GINQGLAWSMAVVMKIDLVGPQQRGFAVGLNEFTGYMAVAITAWLTGYLASSYGVRPVPF HCCCCHHHHHHHHHHEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH YLGIGYAIIGLGLSIGLVRETHGLVQQTTSTNSNFWQLVQQTSWGNRTLFGASQAGLINN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEECCCCCCHHHC LNDGMAWGILPLFFASYGLELPAIGLLKFMYPAVWSVGQLITGPLSDKLGRKALIVQGML CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHH LQAAALGLIVNTTSFGWWLLSSIGLGIGTAMVYPTLIAVVSDNATPASRARVLGIYRFWR HHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH DLGYAIGALLAGIIADWLGMAWAIGLVAGLTAISSLLAHLNLNKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLSPKAHPAINQTGLRANLGQFSLLMLINAMVGGMIGLERTILPILGSQTFGLSSTTTVL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH SFIISFGLVKALMNLIAGVLADRYGRKRILVLGWLVGLPVPWMLIYAPSWGWIVAANVLL HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH GINQGLAWSMAVVMKIDLVGPQQRGFAVGLNEFTGYMAVAITAWLTGYLASSYGVRPVPF HCCCCHHHHHHHHHHEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH YLGIGYAIIGLGLSIGLVRETHGLVQQTTSTNSNFWQLVQQTSWGNRTLFGASQAGLINN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEECCCCCCHHHC LNDGMAWGILPLFFASYGLELPAIGLLKFMYPAVWSVGQLITGPLSDKLGRKALIVQGML CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHH LQAAALGLIVNTTSFGWWLLSSIGLGIGTAMVYPTLIAVVSDNATPASRARVLGIYRFWR HHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH DLGYAIGALLAGIIADWLGMAWAIGLVAGLTAISSLLAHLNLNKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA