Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899695
Identifier: 159899695
GI number: 159899695
Start: 4015463
End: 4016497
Strand: Direct
Name: 159899695
Synonym: Haur_3177
Alternate gene names: NA
Gene position: 4015463-4016497 (Clockwise)
Preceding gene: 159899694
Following gene: 159899697
Centisome position: 63.27
GC content: 52.75
Gene sequence:
>1035_bases ATGTTTGATCTAGAAGTCTGGCGAGCCGAGATTTTGCAACGCTTGCGCCGTTTTGTCCGTGCCCCCCAAACCGAAATGGG TATTTATGGCACTGAACGTCTAACCTACTACCTCAGCAGTTTGGTGCTTGAGCCGTTTTTTCAGGCCTTTACCAACCAGC CATTACGAGCGGTTGTCACCTTGGCCAATGTCACCCAAACCACTGGTACGAGTTTTCTGATTCATAACGCCAATACGCTG CGCTATAGCCAACAATTGCTGTGGAGCGAATTTGAACATTCGCCAGCCTTGCGCTTGGTGATCGAGCAAATTTTGCTCAA GCTTGATGTGATCGAGCATCTACTACACACACTTGGTGATGCCGAAGCCCATTGGTTGCGCCAAAGCTTAAGCGATGAGA TTGAGCCATATCGGCGTAACGGCGAATTAACTGAATTGCGCCATGCGCTGAATGAAATTCCATGGCAAACTCGCTATAGC ACGGTGCGTTCGCTCCAAACCCGTCGCGGCCACTATACTGGCAGCGATTGGCAATTAATCGAGCAAGCCTTGAGTGATCG GGTGGCCATGGTTCGCGCGGCAGGAGCACGCCAACTTGGTCGTGCCCAAAGCAATTTAGCGGCCCATCTACGCGAGCGGC TGTTTCATGTGGCCTTGTATGATCGCGATTTGGGGGCACGGTATGCAGCAGCTCGTTCGATTGGTACATTGCGCAATCAA TTAATCGATAGCATGAGCCGCGAATTACTTACCACAGCCTTGTTTCATGATGATAGTTTTGTGCGTTCGGCGGCTTGTTT GGTGCTTGGGCAACTGGGCAGCGCCATGGTCACCCCCAGCATTTTGGATAGCCTGATCAGCGTGTTGCAGGATGCCGACC CTTACGCCCGCGAAGCTGCTGCCAACGCCTTTGCCGCCATGGGGCAGGCTGCCGCCACCGTCGATGTGTTGGCCGCCTTG CGGACTGCGGTTTTAGATAGTGACCAATATGTCCATGAAGCGGCATTAGGCGCAATTACCGCCCTCAAAGATTAA
Upstream 100 bases:
>100_bases CCTGACCACAGCCATCTAACGTTGCCGATGGAGACGTTTCCGCTAACCGCAGTCACAACCTGGATTCACGAGAGAATTGA GTCGAGTGAAGGAGCAATTC
Downstream 100 bases:
>100_bases ATGAAAAACCAACAGCCCTCAATGTGTCGAGGGCTGTTGGCTTTATCGAACAATATTAACGAACCCCGATCAACTCCACA TCGAAAATCAATTCAGCATT
Product: heat domain-containing protein
Products: NA
Alternate protein names: Heat Domain-Containing Protein; HEAT Domain-Containing Protein
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MFDLEVWRAEILQRLRRFVRAPQTEMGIYGTERLTYYLSSLVLEPFFQAFTNQPLRAVVTLANVTQTTGTSFLIHNANTL RYSQQLLWSEFEHSPALRLVIEQILLKLDVIEHLLHTLGDAEAHWLRQSLSDEIEPYRRNGELTELRHALNEIPWQTRYS TVRSLQTRRGHYTGSDWQLIEQALSDRVAMVRAAGARQLGRAQSNLAAHLRERLFHVALYDRDLGARYAAARSIGTLRNQ LIDSMSRELLTTALFHDDSFVRSAACLVLGQLGSAMVTPSILDSLISVLQDADPYAREAAANAFAAMGQAAATVDVLAAL RTAVLDSDQYVHEAALGAITALKD
Sequences:
>Translated_344_residues MFDLEVWRAEILQRLRRFVRAPQTEMGIYGTERLTYYLSSLVLEPFFQAFTNQPLRAVVTLANVTQTTGTSFLIHNANTL RYSQQLLWSEFEHSPALRLVIEQILLKLDVIEHLLHTLGDAEAHWLRQSLSDEIEPYRRNGELTELRHALNEIPWQTRYS TVRSLQTRRGHYTGSDWQLIEQALSDRVAMVRAAGARQLGRAQSNLAAHLRERLFHVALYDRDLGARYAAARSIGTLRNQ LIDSMSRELLTTALFHDDSFVRSAACLVLGQLGSAMVTPSILDSLISVLQDADPYAREAAANAFAAMGQAAATVDVLAAL RTAVLDSDQYVHEAALGAITALKD >Mature_344_residues MFDLEVWRAEILQRLRRFVRAPQTEMGIYGTERLTYYLSSLVLEPFFQAFTNQPLRAVVTLANVTQTTGTSFLIHNANTL RYSQQLLWSEFEHSPALRLVIEQILLKLDVIEHLLHTLGDAEAHWLRQSLSDEIEPYRRNGELTELRHALNEIPWQTRYS TVRSLQTRRGHYTGSDWQLIEQALSDRVAMVRAAGARQLGRAQSNLAAHLRERLFHVALYDRDLGARYAAARSIGTLRNQ LIDSMSRELLTTALFHDDSFVRSAACLVLGQLGSAMVTPSILDSLISVLQDADPYAREAAANAFAAMGQAAATVDVLAAL RTAVLDSDQYVHEAALGAITALKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38601; Mature: 38601
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDLEVWRAEILQRLRRFVRAPQTEMGIYGTERLTYYLSSLVLEPFFQAFTNQPLRAVVT CCCHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LANVTQTTGTSFLIHNANTLRYSQQLLWSEFEHSPALRLVIEQILLKLDVIEHLLHTLGD HHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC AEAHWLRQSLSDEIEPYRRNGELTELRHALNEIPWQTRYSTVRSLQTRRGHYTGSDWQLI HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHH EQALSDRVAMVRAAGARQLGRAQSNLAAHLRERLFHVALYDRDLGARYAAARSIGTLRNQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LIDSMSRELLTTALFHDDSFVRSAACLVLGQLGSAMVTPSILDSLISVLQDADPYAREAA HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHH ANAFAAMGQAAATVDVLAALRTAVLDSDQYVHEAALGAITALKD HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFDLEVWRAEILQRLRRFVRAPQTEMGIYGTERLTYYLSSLVLEPFFQAFTNQPLRAVVT CCCHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LANVTQTTGTSFLIHNANTLRYSQQLLWSEFEHSPALRLVIEQILLKLDVIEHLLHTLGD HHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC AEAHWLRQSLSDEIEPYRRNGELTELRHALNEIPWQTRYSTVRSLQTRRGHYTGSDWQLI HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHH EQALSDRVAMVRAAGARQLGRAQSNLAAHLRERLFHVALYDRDLGARYAAARSIGTLRNQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LIDSMSRELLTTALFHDDSFVRSAACLVLGQLGSAMVTPSILDSLISVLQDADPYAREAA HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHH ANAFAAMGQAAATVDVLAALRTAVLDSDQYVHEAALGAITALKD HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA