Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899694
Identifier: 159899694
GI number: 159899694
Start: 4014400
End: 4015470
Strand: Direct
Name: 159899694
Synonym: Haur_3176
Alternate gene names: NA
Gene position: 4014400-4015470 (Clockwise)
Preceding gene: 159899693
Following gene: 159899695
Centisome position: 63.25
GC content: 54.9
Gene sequence:
>1071_bases GTGTTGCGATTTGGTCGAGCATTAATTGAATTTGGGCGAGGCTTGGTTGGTTGGCTGGGGCTATTTAATTTGCTGAGTGC GCTCGCCAACCTGCCCAACCTTGGCTGGCTAGCGCAACGTCGGCGTGATGGCCTGCTTGGTGCAGCGCTGGCAGTTTGGG GCTGGCGCGGTGGGCGTTGGCGCTGGCTCAGTGTTTGGCTGGCCGTGCCAATTCAATTAGCGCTAGCCTCGTTGCGCAGC TTGTGGCATAACCCGCTGCGCCAATTTATGGCTGGCTCAACGAGTTGTGAGCCAATTCAAATTATGCTCGATTCTGGTGA GCATGTGCCTGGCTTGTGGTATGCCACATCGCACACCAGCACGGCAATTCTCTATTTGCACGGCGCTGGCAACGACAAAA CCCGCTATGCAACACGGGCCATCGCGCAATTACAACAAGCGGGTTTTAGCGTGTTGGCAATAGATCTAGCGGGACAAGGC GAAAATCCGCGCACCTTGGATGTGCCTGATAGCAACACCGATGTAGCAGCGGCGGTCGCGTGGTTGCGCCAACATGCGGA ACATGTGGTCGTGGTGGCAGTTAGTTTGGGTGGTTGCATCGGGGCGCGAGCAATTGCCGATGGTGTCGCAGTTGATGGTT TAGTCATTATCGGCTCGCCAGTTGCGCTTGATCTCAAGAGCAATCATTATATTCGCAGCGAACTACGGGCTTTGCTCCGC CCGCAATTTTGGCAATACCCCGACCGCATGACCTTGTATCAACTATGGCAGCAATGGCAAGCGCCGCCAATGCGCATTGC CATGGGCTTTAACCAGCTTTTCCCAACGCTTAATTTGGCCGATTCGCTCAGCCGCATTCGTGCCCCAATCTTGCTGGTCT ATGGCCAACGCGACCGCATCGCACCGTATCAGGCAGTTTTGAGCAACTTGGCGACCATTCCCGACGTAACGCTACAACTG ATGCCTGACCACAGCCATCTAACGTTGCCGATGGAGACGTTTCCGCTAACCGCAGTCACAACCTGGATTCACGAGAGAAT TGAGTCGAGTGAAGGAGCAATTCATGTTTGA
Upstream 100 bases:
>100_bases GCAATGGCTCGGCGTGGGCCGACGATTATCAATATTCGAATAAAACCAATGAATGGCGGCATCGCCGACCAGTTCAGCAG GATATAGGAGCGTGGTTTCA
Downstream 100 bases:
>100_bases TCTAGAAGTCTGGCGAGCCGAGATTTTGCAACGCTTGCGCCGTTTTGTCCGTGCCCCCCAAACCGAAATGGGTATTTATG GCACTGAACGTCTAACCTAC
Product: alpha/beta hydrolase fold-domain containing protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold-Domain Containing Protein
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MLRFGRALIEFGRGLVGWLGLFNLLSALANLPNLGWLAQRRRDGLLGAALAVWGWRGGRWRWLSVWLAVPIQLALASLRS LWHNPLRQFMAGSTSCEPIQIMLDSGEHVPGLWYATSHTSTAILYLHGAGNDKTRYATRAIAQLQQAGFSVLAIDLAGQG ENPRTLDVPDSNTDVAAAVAWLRQHAEHVVVVAVSLGGCIGARAIADGVAVDGLVIIGSPVALDLKSNHYIRSELRALLR PQFWQYPDRMTLYQLWQQWQAPPMRIAMGFNQLFPTLNLADSLSRIRAPILLVYGQRDRIAPYQAVLSNLATIPDVTLQL MPDHSHLTLPMETFPLTAVTTWIHERIESSEGAIHV
Sequences:
>Translated_356_residues MLRFGRALIEFGRGLVGWLGLFNLLSALANLPNLGWLAQRRRDGLLGAALAVWGWRGGRWRWLSVWLAVPIQLALASLRS LWHNPLRQFMAGSTSCEPIQIMLDSGEHVPGLWYATSHTSTAILYLHGAGNDKTRYATRAIAQLQQAGFSVLAIDLAGQG ENPRTLDVPDSNTDVAAAVAWLRQHAEHVVVVAVSLGGCIGARAIADGVAVDGLVIIGSPVALDLKSNHYIRSELRALLR PQFWQYPDRMTLYQLWQQWQAPPMRIAMGFNQLFPTLNLADSLSRIRAPILLVYGQRDRIAPYQAVLSNLATIPDVTLQL MPDHSHLTLPMETFPLTAVTTWIHERIESSEGAIHV >Mature_356_residues MLRFGRALIEFGRGLVGWLGLFNLLSALANLPNLGWLAQRRRDGLLGAALAVWGWRGGRWRWLSVWLAVPIQLALASLRS LWHNPLRQFMAGSTSCEPIQIMLDSGEHVPGLWYATSHTSTAILYLHGAGNDKTRYATRAIAQLQQAGFSVLAIDLAGQG ENPRTLDVPDSNTDVAAAVAWLRQHAEHVVVVAVSLGGCIGARAIADGVAVDGLVIIGSPVALDLKSNHYIRSELRALLR PQFWQYPDRMTLYQLWQQWQAPPMRIAMGFNQLFPTLNLADSLSRIRAPILLVYGQRDRIAPYQAVLSNLATIPDVTLQL MPDHSHLTLPMETFPLTAVTTWIHERIESSEGAIHV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39376; Mature: 39376
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRFGRALIEFGRGLVGWLGLFNLLSALANLPNLGWLAQRRRDGLLGAALAVWGWRGGRW CCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCE RWLSVWLAVPIQLALASLRSLWHNPLRQFMAGSTSCEPIQIMLDSGEHVPGLWYATSHTS EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEEECCCC TAILYLHGAGNDKTRYATRAIAQLQQAGFSVLAIDLAGQGENPRTLDVPDSNTDVAAAVA EEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEECCCCCCHHHHHHH WLRQHAEHVVVVAVSLGGCIGARAIADGVAVDGLVIIGSPVALDLKSNHYIRSELRALLR HHHHCCCEEEEEEEECCCHHHHHHHHCCCCCCCEEEECCCEEEEECCCCHHHHHHHHHHC PQFWQYPDRMTLYQLWQQWQAPPMRIAMGFNQLFPTLNLADSLSRIRAPILLVYGQRDRI CHHHCCCCCHHHHHHHHHHCCCCEEEECCHHHHCCCCCHHHHHHHHCCCEEEEECCCCCC APYQAVLSNLATIPDVTLQLMPDHSHLTLPMETFPLTAVTTWIHERIESSEGAIHV CHHHHHHHHHCCCCCCEEEEECCCCEEEEEHHHCCHHHHHHHHHHHHCCCCCCEEC >Mature Secondary Structure MLRFGRALIEFGRGLVGWLGLFNLLSALANLPNLGWLAQRRRDGLLGAALAVWGWRGGRW CCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCE RWLSVWLAVPIQLALASLRSLWHNPLRQFMAGSTSCEPIQIMLDSGEHVPGLWYATSHTS EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEEECCCC TAILYLHGAGNDKTRYATRAIAQLQQAGFSVLAIDLAGQGENPRTLDVPDSNTDVAAAVA EEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEECCCCCCHHHHHHH WLRQHAEHVVVVAVSLGGCIGARAIADGVAVDGLVIIGSPVALDLKSNHYIRSELRALLR HHHHCCCEEEEEEEECCCHHHHHHHHCCCCCCCEEEECCCEEEEECCCCHHHHHHHHHHC PQFWQYPDRMTLYQLWQQWQAPPMRIAMGFNQLFPTLNLADSLSRIRAPILLVYGQRDRI CHHHCCCCCHHHHHHHHHHCCCCEEEECCHHHHCCCCCHHHHHHHHCCCEEEEECCCCCC APYQAVLSNLATIPDVTLQLMPDHSHLTLPMETFPLTAVTTWIHERIESSEGAIHV CHHHHHHHHHCCCCCCEEEEECCCCEEEEEHHHCCHHHHHHHHHHHHCCCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA