Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899677
Identifier: 159899677
GI number: 159899677
Start: 3989339
End: 3989836
Strand: Direct
Name: 159899677
Synonym: Haur_3159
Alternate gene names: NA
Gene position: 3989339-3989836 (Clockwise)
Preceding gene: 159899674
Following gene: 159899679
Centisome position: 62.86
GC content: 49.6
Gene sequence:
>498_bases ATGGCAACAACCTTAGAACACTATGATCAGGCAGGTTTAGAACTTGAAGGCCAAATCTTTTACGAGCCAAATTGGTATTT GTTAAGGGTTGCGGCTGAAGCTCATGCCAGCCTATTGTATTTGGTCGAAACCGCCAATATTGCCTGCAAACCTGCTGCTC GTCCACATATTTCGGTGATCAAGGGCGAAGCTCCCAACCGCAACCAAGCCGATTGGGGCGTGGCATTTGTCGGCGAGACA GTCAGATTTCGCTATGTGCCAGTGCTACAAGCTGAAAACGGCCTACATTTATGGATTGATTGCCACAGCCCAGGCTTGTG CACGATTCGTGAACATTTTGGTTTGCCAACCTTGCGGCGCAACGATGGAGCTTATTTGGTCAATTTCCATCTGACGCTTG GCCGCCGCAAAAAAGCGGTTACGCCACAGCTGCGCCCGCAACTACGGTTATCGCCACAAAGCCATATTGATCTTGAAACT GGAATGCAACACCTGTGA
Upstream 100 bases:
>100_bases TCTCACTCTACAAAGATCCTTGTTGATCATATTTCTGGCATAATTTGACTAAAATTGAGCAATCATTCAACTAAATTACG AGAGCCAATGAGGTAAACCG
Downstream 100 bases:
>100_bases AGAATACAAGATTGTGGTTAAAACAATTCAGCCGCCACAATTGGCGACTGAACGGCTGCCCCACCAAGATTTATACTACG CTACCCGACCCTACCAACGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MATTLEHYDQAGLELEGQIFYEPNWYLLRVAAEAHASLLYLVETANIACKPAARPHISVIKGEAPNRNQADWGVAFVGET VRFRYVPVLQAENGLHLWIDCHSPGLCTIREHFGLPTLRRNDGAYLVNFHLTLGRRKKAVTPQLRPQLRLSPQSHIDLET GMQHL
Sequences:
>Translated_165_residues MATTLEHYDQAGLELEGQIFYEPNWYLLRVAAEAHASLLYLVETANIACKPAARPHISVIKGEAPNRNQADWGVAFVGET VRFRYVPVLQAENGLHLWIDCHSPGLCTIREHFGLPTLRRNDGAYLVNFHLTLGRRKKAVTPQLRPQLRLSPQSHIDLET GMQHL >Mature_164_residues ATTLEHYDQAGLELEGQIFYEPNWYLLRVAAEAHASLLYLVETANIACKPAARPHISVIKGEAPNRNQADWGVAFVGETV RFRYVPVLQAENGLHLWIDCHSPGLCTIREHFGLPTLRRNDGAYLVNFHLTLGRRKKAVTPQLRPQLRLSPQSHIDLETG MQHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18659; Mature: 18527
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTLEHYDQAGLELEGQIFYEPNWYLLRVAAEAHASLLYLVETANIACKPAARPHISVI CCCCCCCCCCCCCEECCEEEECCCEEEEEEECCCCCEEEEEEEECCEEECCCCCCCEEEE KGEAPNRNQADWGVAFVGETVRFRYVPVLQAENGLHLWIDCHSPGLCTIREHFGLPTLRR ECCCCCCCCCCCEEEEECCEEEEEEEEEEECCCCCEEEEEECCCCEEEEHHHCCCCCEEE NDGAYLVNFHLTLGRRKKAVTPQLRPQLRLSPQSHIDLETGMQHL CCCEEEEEEEEEECCCCCCCCCCCCCCEEECCCCCEEHHHCCCCC >Mature Secondary Structure ATTLEHYDQAGLELEGQIFYEPNWYLLRVAAEAHASLLYLVETANIACKPAARPHISVI CCCCCCCCCCCCEECCEEEECCCEEEEEEECCCCCEEEEEEEECCEEECCCCCCCEEEE KGEAPNRNQADWGVAFVGETVRFRYVPVLQAENGLHLWIDCHSPGLCTIREHFGLPTLRR ECCCCCCCCCCCEEEEECCEEEEEEEEEEECCCCCEEEEEECCCCEEEEHHHCCCCCEEE NDGAYLVNFHLTLGRRKKAVTPQLRPQLRLSPQSHIDLETGMQHL CCCEEEEEEEEEECCCCCCCCCCCCCCEEECCCCCEEHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA