The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159899677

Identifier: 159899677

GI number: 159899677

Start: 3989339

End: 3989836

Strand: Direct

Name: 159899677

Synonym: Haur_3159

Alternate gene names: NA

Gene position: 3989339-3989836 (Clockwise)

Preceding gene: 159899674

Following gene: 159899679

Centisome position: 62.86

GC content: 49.6

Gene sequence:

>498_bases
ATGGCAACAACCTTAGAACACTATGATCAGGCAGGTTTAGAACTTGAAGGCCAAATCTTTTACGAGCCAAATTGGTATTT
GTTAAGGGTTGCGGCTGAAGCTCATGCCAGCCTATTGTATTTGGTCGAAACCGCCAATATTGCCTGCAAACCTGCTGCTC
GTCCACATATTTCGGTGATCAAGGGCGAAGCTCCCAACCGCAACCAAGCCGATTGGGGCGTGGCATTTGTCGGCGAGACA
GTCAGATTTCGCTATGTGCCAGTGCTACAAGCTGAAAACGGCCTACATTTATGGATTGATTGCCACAGCCCAGGCTTGTG
CACGATTCGTGAACATTTTGGTTTGCCAACCTTGCGGCGCAACGATGGAGCTTATTTGGTCAATTTCCATCTGACGCTTG
GCCGCCGCAAAAAAGCGGTTACGCCACAGCTGCGCCCGCAACTACGGTTATCGCCACAAAGCCATATTGATCTTGAAACT
GGAATGCAACACCTGTGA

Upstream 100 bases:

>100_bases
TCTCACTCTACAAAGATCCTTGTTGATCATATTTCTGGCATAATTTGACTAAAATTGAGCAATCATTCAACTAAATTACG
AGAGCCAATGAGGTAAACCG

Downstream 100 bases:

>100_bases
AGAATACAAGATTGTGGTTAAAACAATTCAGCCGCCACAATTGGCGACTGAACGGCTGCCCCACCAAGATTTATACTACG
CTACCCGACCCTACCAACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MATTLEHYDQAGLELEGQIFYEPNWYLLRVAAEAHASLLYLVETANIACKPAARPHISVIKGEAPNRNQADWGVAFVGET
VRFRYVPVLQAENGLHLWIDCHSPGLCTIREHFGLPTLRRNDGAYLVNFHLTLGRRKKAVTPQLRPQLRLSPQSHIDLET
GMQHL

Sequences:

>Translated_165_residues
MATTLEHYDQAGLELEGQIFYEPNWYLLRVAAEAHASLLYLVETANIACKPAARPHISVIKGEAPNRNQADWGVAFVGET
VRFRYVPVLQAENGLHLWIDCHSPGLCTIREHFGLPTLRRNDGAYLVNFHLTLGRRKKAVTPQLRPQLRLSPQSHIDLET
GMQHL
>Mature_164_residues
ATTLEHYDQAGLELEGQIFYEPNWYLLRVAAEAHASLLYLVETANIACKPAARPHISVIKGEAPNRNQADWGVAFVGETV
RFRYVPVLQAENGLHLWIDCHSPGLCTIREHFGLPTLRRNDGAYLVNFHLTLGRRKKAVTPQLRPQLRLSPQSHIDLETG
MQHL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18659; Mature: 18527

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTLEHYDQAGLELEGQIFYEPNWYLLRVAAEAHASLLYLVETANIACKPAARPHISVI
CCCCCCCCCCCCCEECCEEEECCCEEEEEEECCCCCEEEEEEEECCEEECCCCCCCEEEE
KGEAPNRNQADWGVAFVGETVRFRYVPVLQAENGLHLWIDCHSPGLCTIREHFGLPTLRR
ECCCCCCCCCCCEEEEECCEEEEEEEEEEECCCCCEEEEEECCCCEEEEHHHCCCCCEEE
NDGAYLVNFHLTLGRRKKAVTPQLRPQLRLSPQSHIDLETGMQHL
CCCEEEEEEEEEECCCCCCCCCCCCCCEEECCCCCEEHHHCCCCC
>Mature Secondary Structure 
ATTLEHYDQAGLELEGQIFYEPNWYLLRVAAEAHASLLYLVETANIACKPAARPHISVI
CCCCCCCCCCCCEECCEEEECCCEEEEEEECCCCCEEEEEEEECCEEECCCCCCCEEEE
KGEAPNRNQADWGVAFVGETVRFRYVPVLQAENGLHLWIDCHSPGLCTIREHFGLPTLRR
ECCCCCCCCCCCEEEEECCEEEEEEEEEEECCCCCEEEEEECCCCEEEEHHHCCCCCEEE
NDGAYLVNFHLTLGRRKKAVTPQLRPQLRLSPQSHIDLETGMQHL
CCCEEEEEEEEEECCCCCCCCCCCCCCEEECCCCCEEHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA